Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s37.

Sample reads: 133,410. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 15124.37 113367.21
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2806.45 21036.21 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2354.37 17647.57 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. mt-nd2 ENSDARG00000063899 1808.30 13554.41 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. mt-atp6 ENSDARG00000063911 1586.74 11893.67 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
6. mt-co2 ENSDARG00000063908 1432.32 10736.19 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. ckmb ENSDARG00000040565 1405.46 10534.86 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
8. mt-nd4 ENSDARG00000063917 1235.37 9259.92 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. tmsb4x ENSDARG00000077777 1199.57 8991.57 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. ckma ENSDARG00000035327, ENSDARG00000114671 1092.14 8186.32 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. mt-co3 ENSDARG00000063912 946.67 7095.92 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. mt-nd1 ENSDARG00000063895 919.82 6894.66 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
13. atp2a1 ENSDARG00000020574 917.58 6877.87 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
14. mt-cyb ENSDARG00000063924 819.11 6139.77 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
15. actc1b ENSDARG00000099197 810.15 6072.61 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
16. eef1a1l1 ENSDARG00000020850 781.06 5854.56 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. mylz3 ENSDARG00000017441 731.82 5485.48 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
18. actb2 ENSDARG00000037870 713.92 5351.30 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
19. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 687.06 5149.97 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
20. ppiaa ENSDARG00000009212 684.83 5133.26 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
21. si:dkey-151g10.6 si:dkey-151g10.6 673.64 5049.38
22. acta1a ENSDARG00000036371 657.97 4931.92 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
23. apoa1b ENSDARG00000101324 606.50 4546.12 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
24. zgc:161979_1 zgc:161979_1 606.50 4546.12
25. zgc:112425 zgc:112425 586.35 4395.08
26. apoc1l apoc1l 577.40 4328.00
27. hspa8 ENSDARG00000068992, ENSDARG00000114726 523.69 3925.40 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
28. eef2b ENSDARG00000100371, ENSDARG00000109247 492.36 3690.57 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
29. myhz1.3 ENSDARG00000067997 487.88 3656.98 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
30. rpl10a ENSDARG00000042905, ENSDARG00000115649 478.93 3589.90 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
31. tnnc2 ENSDARG00000070835, ENSDARG00000111155 465.50 3489.23 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
32. hmga1a ENSDARG00000028335 458.79 3438.94 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
33. acta1b ENSDARG00000055618 456.55 3422.15 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
34. ttna ttna 447.60 3355.06
35. btf3 ENSDARG00000035400, ENSDARG00000116462 445.36 3338.27 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
36. myl10 ENSDARG00000062592 409.55 3069.85 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
37. zgc:161979 zgc:161979 409.55 3069.85
38. zgc:66286 zgc:66286 407.32 3053.13
39. rpl18a ENSDARG00000025073 402.84 3019.55 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
40. actb1 ENSDARG00000037746, ENSDARG00000113649 398.36 2985.97 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
41. apoa2 ENSDARG00000015866 380.46 2851.80 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
42. rps26l ENSDARG00000030408 380.46 2851.80 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
43. rpl23 ENSDARG00000053457 360.32 2700.84 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
44. hsp90aa1.1 ENSDARG00000010478 342.41 2566.59 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
45. fabp3 ENSDARG00000023290 326.75 2449.21 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
46. rpl26 ENSDARG00000102317 326.75 2449.21 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
47. rps14 ENSDARG00000036629 326.75 2449.21 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
48. rps23 ENSDARG00000021838 322.27 2415.63 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
49. myl1 ENSDARG00000014196 315.56 2365.33 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
50. rpl8 ENSDARG00000014867 313.32 2348.54 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
51. aldoab ENSDARG00000034470 308.84 2314.96 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
52. eif5a ENSDARG00000017235 302.13 2264.67 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
53. mt-co1 ENSDARG00000063905 302.13 2264.67 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
54. apoeb ENSDARG00000040295 288.70 2164.00 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
55. lama2 ENSDARG00000099390 286.46 2147.21 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
56. apobb apobb 281.99 2113.70
57. rpl21 ENSDARG00000010516, ENSDARG00000110263 281.99 2113.70 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
58. rps27a ENSDARG00000032725, ENSDARG00000114059 279.75 2096.91 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
59. tnni2b.1 ENSDARG00000035958 279.75 2096.91 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
60. rpl36a ENSDARG00000058105, ENSDARG00000112656 277.51 2080.12 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
61. rps2 ENSDARG00000077291 277.51 2080.12 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
62. tpm3 ENSDARG00000005162 273.04 2046.62 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
63. rps15 ENSDARG00000070849, ENSDARG00000110979 268.56 2013.04 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
64. rpl36 ENSDARG00000100588 257.37 1929.16 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
65. rps3 ENSDARG00000103007 252.89 1895.58 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
66. zgc:92533 zgc:92533 252.89 1895.58
67. rps6 ENSDARG00000019778 248.42 1862.07 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
68. cyt1l ENSDARG00000036832 243.94 1828.49 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
69. ttnb ttnb 241.70 1811.70
70. pvalb2 ENSDARG00000002768, ENSDARG00000114085 239.47 1794.99 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
71. rplp0 ENSDARG00000051783 237.23 1778.20 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
72. rpl9 ENSDARG00000037350, ENSDARG00000112384 234.99 1761.41 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
73. atp5g3b 228.28 1711.11 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
74. rpl11 ENSDARG00000043509 226.04 1694.32 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
75. rpl27 ENSDARG00000015128 223.80 1677.53 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
76. rpl7 ENSDARG00000007320 223.80 1677.53 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
77. apoa1a ENSDARG00000012076, ENSDARG00000110395 221.56 1660.74 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
78. tnnt3a ENSDARG00000030270 221.56 1660.74 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
79. rpl6 ENSDARG00000058451 219.32 1643.95 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
80. rpl35 ENSDARG00000018334 214.85 1610.44 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
81. tnni2a.4 ENSDARG00000029069 214.85 1610.44 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
82. RPL29 ENSDARG00000077717 210.37 1576.86 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
83. si:dkeyp-86f7.3 si:dkeyp-86f7.3 210.37 1576.86
84. rps19 ENSDARG00000030602 205.90 1543.36 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
85. rps9 ENSDARG00000011405, ENSDARG00000113248 205.90 1543.36 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
86. rpl19 ENSDARG00000013307 203.66 1526.57 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
87. id1 ENSDARG00000040764 199.18 1492.99 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
88. pabpc1a ENSDARG00000017219 199.18 1492.99 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
89. zgc:153129 zgc:153129 196.94 1476.20
90. fkbp1aa ENSDARG00000022684 194.71 1459.48 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
91. COX5B_1 ENSDARG00000015978 192.47 1442.69 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
92. myhz2 ENSDARG00000012944 192.47 1442.69 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
93. tmem38a ENSDARG00000024047 190.23 1425.90 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
94. rpl18 ENSDARG00000029533 185.75 1392.32 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
95. rps13 ENSDARG00000036298, ENSDARG00000112818 181.28 1358.81 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
96. rpl39 ENSDARG00000036316, ENSDARG00000117167 179.04 1342.02 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
97. rps24 ENSDARG00000039347 179.04 1342.02 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
98. rps15a ENSDARG00000010160 176.80 1325.23 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
99. smyhc1 ENSDARG00000099959, ENSDARG00000115916 176.80 1325.23 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
100. hsp90ab1 ENSDARG00000029150 174.56 1308.44 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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