Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E11_5_slice_2, section s43.

Sample reads: 96,257. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3504.83 36411.17 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 3370.27 35013.25 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Nd4 ENSMUSG00000064363 2296.31 23856.03 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Nd1 ENSMUSG00000064341 2287.51 23764.61 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Co2 ENSMUSG00000064354 2218.97 23052.56 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Atp6 ENSMUSG00000064357 2195.70 22810.81 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Co1 ENSMUSG00000064351 1267.62 13169.12 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. Actb ENSMUSG00000029580 878.41 9125.67 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
9. mt-Co3 ENSMUSG00000064358 871.49 9053.78 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
10. mt-Nd3 ENSMUSG00000064360 851.37 8844.76 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. H19 ENSMUSG00000000031 835.02 8674.90 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
12. Igf2 ENSMUSG00000048583 721.84 7499.09 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
13. Mdk ENSMUSG00000027239 672.80 6989.62 midkine [Source:MGI Symbol;Acc:MGI:96949]
14. mt-Rnr2 ENSMUSG00000064339 607.40 6310.19 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
15. Eef1a1 ENSMUSG00000037742 539.49 5604.68 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. mt-Nd2 ENSMUSG00000064345 501.77 5212.82 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
17. Hbb-y ENSMUSG00000052187 426.94 4435.42 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
18. Gm13340 ENSMUSG00000083563 392.36 4076.17 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. Tuba1b ENSMUSG00000023004 345.20 3586.23 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
20. Npm1 ENSMUSG00000057113 318.79 3311.86 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Tubb5 ENSMUSG00000001525 305.59 3174.73 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
22. Hba-x ENSMUSG00000055609 267.23 2776.21 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
23. Cdkn1c ENSMUSG00000037664 264.72 2750.14 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
24. Tpt1 ENSMUSG00000060126 248.37 2580.28 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
25. Hmga2 ENSMUSG00000056758 242.71 2521.48 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
26. Ubb ENSMUSG00000019505 242.71 2521.48 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
27. Nedd4 ENSMUSG00000032216 228.88 2377.80 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
28. Hba-a1 ENSMUSG00000069919 225.10 2338.53 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
29. mt-Nd5 ENSMUSG00000064367 208.13 2162.23 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
30. Cfl1 ENSMUSG00000056201 198.69 2064.16 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
31. Rpsa ENSMUSG00000032518 189.89 1972.74 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
32. Chchd2 ENSMUSG00000070493 186.12 1933.57 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
33. Pkm ENSMUSG00000032294 179.20 1861.68 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
34. Rpl4 ENSMUSG00000032399 177.95 1848.70 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
35. Ybx1 ENSMUSG00000028639 175.43 1822.52 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
36. Col3a1 ENSMUSG00000026043 167.26 1737.64 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
37. Fkbp1a ENSMUSG00000032966 166.00 1724.55 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
38. Pbx1 ENSMUSG00000052534 159.71 1659.20 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
39. Eif4g2 ENSMUSG00000005610 157.20 1633.13 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
40. Acta2 ENSMUSG00000035783 154.68 1606.95 actin, alpha 2, smooth muscle, aorta [Source:MGI Symbol;Acc:MGI:87909]
41. Eef1b2 ENSMUSG00000025967 154.68 1606.95 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
42. Hsp90ab1 ENSMUSG00000023944 154.05 1600.40 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
43. Rps20 ENSMUSG00000028234 151.54 1574.33 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
44. Actc1 ENSMUSG00000068614 150.91 1567.78 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
45. Atp5g3 ENSMUSG00000018770 149.65 1554.69 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
46. Ran ENSMUSG00000029430 147.76 1535.06 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
47. Hsp90aa1 ENSMUSG00000021270 145.88 1515.53 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
48. Rps26 ENSMUSG00000025362 142.73 1482.80 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
49. Rps4x ENSMUSG00000031320 140.85 1463.27 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
50. Grb10 ENSMUSG00000020176 138.96 1443.64 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
51. Rpl23 ENSMUSG00000071415 136.45 1417.56 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
52. Hnrnpc ENSMUSG00000060373 132.04 1371.74 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
53. Peg3 ENSMUSG00000002265 129.53 1345.67 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
54. Ywhab ENSMUSG00000018326 127.64 1326.03 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
55. Eif5a ENSMUSG00000078812 127.01 1319.49 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
56. Tmsb4x ENSMUSG00000049775 127.01 1319.49 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
57. Meg3 ENSMUSG00000021268 123.24 1280.32 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
58. Pcbp1 ENSMUSG00000051695 121.98 1267.23 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
59. Crabp1 ENSMUSG00000032291 115.07 1195.45 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
60. Gm10800 ENSMUSG00000075014 113.18 1175.81 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
61. Set ENSMUSG00000054766 113.18 1175.81 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
62. Hmgn1 ENSMUSG00000040681 111.29 1156.18 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
63. Myl6 ENSMUSG00000090841 111.29 1156.18 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
64. Hbb-bh1 ENSMUSG00000052217 110.67 1149.73 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
65. Banf1 ENSMUSG00000024844 110.04 1143.19 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
66. Rps3a1 ENSMUSG00000028081 109.41 1136.64 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
67. Wbp5 108.78 1130.10 WW domain binding protein 5
68. Ago2 ENSMUSG00000036698 105.64 1097.48 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
69. Trim28 ENSMUSG00000005566 105.01 1090.93 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
70. Gm14303 ENSMUSG00000081344 103.75 1077.84 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
71. Hba-a2 ENSMUSG00000069917 103.75 1077.84 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
72. Ndufa12 ENSMUSG00000020022 103.12 1071.30 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
73. Rpl18a ENSMUSG00000045128 103.12 1071.30 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
74. Cdk4 ENSMUSG00000006728 102.49 1064.75 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
75. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 101.23 1051.66 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
76. Tuba1a ENSMUSG00000072235 99.35 1032.13 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
77. Rpl32 ENSMUSG00000057841 96.83 1005.95 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
78. Rplp1 ENSMUSG00000007892 96.20 999.41 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
79. Rrm2 ENSMUSG00000020649 96.20 999.41 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
80. Marcks ENSMUSG00000069662 94.95 986.42 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
81. Marcksl1 ENSMUSG00000047945 94.95 986.42 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
82. Pabpc1 ENSMUSG00000022283 94.95 986.42 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
83. Anp32b ENSMUSG00000028333 93.06 966.79 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
84. Gm5805 ENSMUSG00000061848 91.17 947.15 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
85. Hnrnpa0 ENSMUSG00000007836 91.17 947.15 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
86. Paics ENSMUSG00000029247 90.54 940.61 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
87. Fscn1 ENSMUSG00000029581 89.29 927.62 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
88. Scd2 ENSMUSG00000025203 89.29 927.62 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
89. Hnrnpa2b1 ENSMUSG00000004980 88.03 914.53 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
90. Ddx5 ENSMUSG00000020719 86.77 901.44 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
91. Hnrnph1 ENSMUSG00000007850 86.14 894.90 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
92. H3f3b ENSMUSG00000016559 85.51 888.35 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
93. Cox8a ENSMUSG00000035885 84.26 875.36 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
94. Col1a1 ENSMUSG00000001506 82.37 855.73 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
95. U2af2 ENSMUSG00000030435 82.37 855.73 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
96. Ddx39b ENSMUSG00000019432 81.11 842.64 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
97. Stmn1 ENSMUSG00000028832 81.11 842.64 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
98. Rpl37 ENSMUSG00000041841 80.48 836.10 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
99. Rpl26 ENSMUSG00000060938 79.86 829.65 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
100. Sub1 ENSMUSG00000022205 79.86 829.65 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA