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Experiment Mouse_E11_5_slice_1, section s70.

Sample reads: 96,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 5991.00 62246.10 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Cytb ENSMUSG00000064370 3914.98 40676.38 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd1 ENSMUSG00000064341 2768.04 28759.75 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. Ptma ENSMUSG00000026238 2736.00 28426.86 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
5. mt-Nd4 ENSMUSG00000064363 2543.77 26429.60 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Atp6 ENSMUSG00000064357 1967.10 20438.04 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. mt-Co2 ENSMUSG00000064354 1774.88 18440.89 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Nd2 ENSMUSG00000064345 1665.95 17309.11 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Nd5 ENSMUSG00000064367 1621.10 16843.12 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
10. mt-Co1 ENSMUSG00000064351 1038.01 10784.86 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
11. mt-Nd3 ENSMUSG00000064360 852.20 8854.30 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. Actb ENSMUSG00000029580 698.42 7256.54 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
13. H19 ENSMUSG00000000031 666.38 6923.64 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
14. Mdk ENSMUSG00000027239 602.30 6257.86 midkine [Source:MGI Symbol;Acc:MGI:96949]
15. Gm10800 ENSMUSG00000075014 595.90 6191.36 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
16. Hmga2 ENSMUSG00000056758 595.90 6191.36 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
17. mt-Co3 ENSMUSG00000064358 506.19 5259.28 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. Igf2 ENSMUSG00000048583 403.67 4194.10 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
19. Hbb-y ENSMUSG00000052187 365.23 3794.72 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
20. Eef1a1 ENSMUSG00000037742 358.82 3728.12 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
21. mt-Rnr1 ENSMUSG00000064337 358.82 3728.12 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
22. Gm13340 ENSMUSG00000083563 294.74 3062.33 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
23. Npm1 ENSMUSG00000057113 269.11 2796.04 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
24. Nedd4 ENSMUSG00000032216 243.48 2529.74 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
25. Set ENSMUSG00000054766 243.48 2529.74 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
26. Pkm ENSMUSG00000032294 237.08 2463.25 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
27. Rpsa ENSMUSG00000032518 237.08 2463.25 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
28. Malat1 ENSMUSG00000092341 217.85 2263.45 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
29. Ubb ENSMUSG00000019505 217.85 2263.45 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
30. Hba-a1 ENSMUSG00000069919 211.45 2196.95 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
31. Cfl1 ENSMUSG00000056201 198.63 2063.75 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
32. Rrm2 ENSMUSG00000020649 198.63 2063.75 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
33. Ywhab ENSMUSG00000018326 198.63 2063.75 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
34. Hnrnpc ENSMUSG00000060373 192.22 1997.15 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
35. Peg3 ENSMUSG00000002265 192.22 1997.15 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
36. Banf1 ENSMUSG00000024844 185.82 1930.66 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
37. Hba-x ENSMUSG00000055609 185.82 1930.66 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
38. Tuba1b ENSMUSG00000023004 173.00 1797.46 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
39. Tubb5 ENSMUSG00000001525 173.00 1797.46 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
40. Hbb-bh1 ENSMUSG00000052217 160.19 1664.36 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
41. Rpl23 ENSMUSG00000071415 160.19 1664.36 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
42. Top2a ENSMUSG00000020914 160.19 1664.36 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
43. Hsp90ab1 ENSMUSG00000023944 153.78 1597.76 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
44. Paics ENSMUSG00000029247 153.78 1597.76 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
45. Tpt1 ENSMUSG00000060126 153.78 1597.76 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
46. Myl6 ENSMUSG00000090841 147.37 1531.16 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
47. Eif4g2 ENSMUSG00000005610 140.96 1464.57 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
48. Wbp5 134.56 1398.07 WW domain binding protein 5
49. Hsp90aa1 ENSMUSG00000021270 128.15 1331.47 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
50. Rps4x ENSMUSG00000031320 128.15 1331.47 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
51. Top1 ENSMUSG00000070544 128.15 1331.47 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
52. Gm17132 ENSMUSG00000061331 121.74 1264.87 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
53. Ndufa12 ENSMUSG00000020022 121.74 1264.87 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
54. Ngfrap1 121.74 1264.87 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
55. Rpl18a ENSMUSG00000045128 121.74 1264.87 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
56. Rplp1 ENSMUSG00000007892 121.74 1264.87 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
57. Gm5805 ENSMUSG00000061848 115.33 1198.27 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
58. Grb10 ENSMUSG00000020176 115.33 1198.27 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
59. Mapre1 ENSMUSG00000027479 115.33 1198.27 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
60. Rps20 ENSMUSG00000028234 115.33 1198.27 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
61. Son ENSMUSG00000022961 115.33 1198.27 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
62. Caprin1 ENSMUSG00000027184 108.93 1131.78 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
63. Ran ENSMUSG00000029430 108.93 1131.78 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
64. Rpl4 ENSMUSG00000032399 108.93 1131.78 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
65. Sfrp1 ENSMUSG00000031548 108.93 1131.78 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
66. Trim28 ENSMUSG00000005566 108.93 1131.78 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
67. Ago2 ENSMUSG00000036698 102.52 1065.18 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
68. Ccnd2 ENSMUSG00000000184 102.52 1065.18 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
69. Eef1b2 ENSMUSG00000025967 102.52 1065.18 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
70. Hba-a2 ENSMUSG00000069917 102.52 1065.18 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
71. Pabpc1 ENSMUSG00000022283 102.52 1065.18 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
72. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 102.52 1065.18 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
73. Col3a1 ENSMUSG00000026043 96.11 998.58 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
74. Fkbp1a ENSMUSG00000032966 96.11 998.58 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
75. Hnrnpa0 ENSMUSG00000007836 96.11 998.58 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
76. Cdk4 ENSMUSG00000006728 89.70 931.98 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
77. Chchd2 ENSMUSG00000070493 89.70 931.98 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
78. Col1a1 ENSMUSG00000001506 89.70 931.98 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
79. Eif5a ENSMUSG00000078812 89.70 931.98 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
80. Igfbp4 ENSMUSG00000017493 89.70 931.98 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
81. Morf4l1 ENSMUSG00000062270 89.70 931.98 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
82. Rpl26 ENSMUSG00000060938 89.70 931.98 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
83. Sparc ENSMUSG00000018593 89.70 931.98 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
84. U2af2 ENSMUSG00000030435 89.70 931.98 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
85. Adprh ENSMUSG00000002844 83.30 865.48 ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
86. Arl6ip1 ENSMUSG00000030654 83.30 865.48 ADP-ribosylation factor-like 6 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1858943]
87. Atp5g3 ENSMUSG00000018770 83.30 865.48 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
88. Plagl1 ENSMUSG00000019817 83.30 865.48 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
89. Rps26 ENSMUSG00000025362 83.30 865.48 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
90. Rps5 ENSMUSG00000012848 83.30 865.48 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
91. Serbp1 ENSMUSG00000036371 83.30 865.48 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
92. Srsf3 ENSMUSG00000071172 83.30 865.48 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
93. Sub1 ENSMUSG00000022205 83.30 865.48 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
94. Ybx1 ENSMUSG00000028639 83.30 865.48 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
95. 2810417H13Rik 76.89 798.88 RIKEN cDNA 2810417H13 gene
96. Cks1b ENSMUSG00000028044 76.89 798.88 CDC28 protein kinase 1b [Source:MGI Symbol;Acc:MGI:1889208]
97. Ddx3x ENSMUSG00000000787 76.89 798.88 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
98. Ddx5 ENSMUSG00000020719 76.89 798.88 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
99. Eef2 ENSMUSG00000034994 76.89 798.88 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
100. Gm5963 ENSMUSG00000052192 76.89 798.88 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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