Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s55.

Sample reads: 391,635. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 6898.66 17615.00 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 3918.75 10006.12 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. SFRP1 ENSG00000104332 2621.04 6692.55 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
4. ACTB ENSG00000075624 2390.34 6103.48 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
5. RPL41 ENSG00000229117 2366.31 6042.12 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
6. ACTG1 ENSG00000184009 2303.83 5882.59 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
7. RPL5 ENSG00000122406 2230.13 5694.40 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
8. RPS20 ENSG00000008988 1871.26 4778.07 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
9. MDK ENSG00000110492 1725.47 4405.81 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
10. PPIA ENSG00000196262 1701.43 4344.42 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. RPL15 ENSG00000174748 1635.75 4176.72 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
12. VIM ENSG00000026025 1465.93 3743.10 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
13. TUBA1B ENSG00000123416 1437.09 3669.46 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
14. RPS6 ENSG00000137154 1398.64 3571.28 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
15. RPL18A ENSG00000105640 1363.39 3481.27 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
16. COL3A1 ENSG00000168542 1348.97 3444.45 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
17. RPL9 ENSG00000163682 1312.12 3350.36 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
18. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1286.49 3284.92 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
19. GNAS ENSG00000087460 1281.68 3272.63 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
20. MTRNR2L8 ENSG00000255823 1249.64 3190.82 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
21. RPS23 ENSG00000186468 1248.04 3186.74 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
22. RPL13AP20 ENSG00000234498 1204.78 3076.28 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
23. RPL23 ENSG00000125691 1204.78 3076.28 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
24. NGFRAP1 NGFRAP1 1191.97 3043.57
25. RPL10A ENSG00000198755 1183.95 3023.09 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
26. RPS5 ENSG00000083845 1182.35 3019.01 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
27. RPS12 ENSG00000112306 1135.89 2900.38 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
28. RPL34 ENSG00000109475 1094.24 2794.03 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
29. RPS27 ENSG00000177954 1078.22 2753.12 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
30. MTRNR2L1 ENSG00000256618 1058.99 2704.02 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
31. RPL37 ENSG00000145592 1042.97 2663.11 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
32. COL1A1 ENSG00000108821 1030.15 2630.38 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
33. GAPDH ENSG00000111640 1022.14 2609.93 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
34. HSP90AB1 ENSG00000096384 1002.92 2560.85 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
35. RPL31 ENSG00000071082 994.91 2540.40 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
36. RPS11 ENSG00000142534 994.91 2540.40 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
37. RPS27A ENSG00000143947 970.88 2479.04 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
38. STMN1 ENSG00000117632 918.01 2344.04 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
39. IFITM3 ENSG00000142089 887.57 2266.32 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
40. RPS8 ENSG00000142937 884.36 2258.12 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
41. RPL14 ENSG00000188846 881.16 2249.95 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
42. RPLP1 ENSG00000137818 881.16 2249.95 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
43. TPT1 ENSG00000133112 869.94 2221.30 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
44. RPS15A ENSG00000134419 868.34 2217.21 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
45. RPL37A ENSG00000197756 860.33 2196.76 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
46. RPL13 ENSG00000167526 858.73 2192.68 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
47. CFL1 ENSG00000172757 815.47 2082.22 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
48. HNRNPC ENSG00000092199 778.62 1988.12 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
49. DLK1 ENSG00000185559 773.82 1975.87 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
50. RPL7A ENSG00000148303, ENSG00000280858 746.58 1906.31 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
51. DDX17 ENSG00000100201 740.17 1889.95 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
52. RPL10 ENSG00000147403 730.56 1865.41 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
53. IFITM2 ENSG00000185201 711.33 1816.31 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
54. RPS3A ENSG00000145425 687.30 1754.95 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
55. EIF4G2 ENSG00000110321 684.10 1746.78 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
56. RPS14 ENSG00000164587 680.89 1738.58 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
57. HNRNPH1 ENSG00000169045, ENSG00000284254 674.49 1722.24 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
58. RPL3 ENSG00000100316 652.06 1664.97 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
59. RPL6 ENSG00000089009 644.05 1644.51 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
60. NPM1 ENSG00000181163 642.44 1640.40 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
61. RPL35 ENSG00000136942 637.64 1628.15 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
62. RPS25 ENSG00000118181, ENSG00000280831 637.64 1628.15 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
63. RPS2 ENSG00000140988 631.23 1611.78 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
64. RBM3 ENSG00000102317 628.02 1603.58 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
65. PFN1 ENSG00000108518 626.42 1599.50 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
66. RPS7 ENSG00000171863 621.62 1587.24 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
67. RPL11 ENSG00000142676 616.81 1574.96 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
68. HSPA8 ENSG00000109971 613.61 1566.79 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
69. SPARC ENSG00000113140 613.61 1566.79 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
70. UBB ENSG00000170315 608.80 1554.51 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
71. SERF2 ENSG00000140264 607.20 1550.42 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
72. RPS29 ENSG00000213741 605.60 1546.34 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
73. KCTD12 ENSG00000178695 597.58 1525.86 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
74. RPS28 ENSG00000233927 597.58 1525.86 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
75. HMGN1 ENSG00000205581 592.78 1513.60 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
76. RPS16 ENSG00000105193 579.96 1480.87 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
77. HNRNPD ENSG00000138668 543.11 1386.77 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
78. HBE1 ENSG00000213931 536.70 1370.41 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
79. RPL35A ENSG00000182899 531.90 1358.15 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
80. MORF4L1 ENSG00000185787 527.09 1345.87 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
81. RPL26 ENSG00000161970 527.09 1345.87 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
82. RPL32 ENSG00000144713 527.09 1345.87 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
83. RPS15 ENSG00000115268 511.07 1304.96 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
84. COL1A2 ENSG00000164692 506.26 1292.68 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
85. RPL4 ENSG00000174444 498.25 1272.23 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
86. RPS21 ENSG00000171858 488.64 1247.69 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
87. SRSF3 ENSG00000112081 480.63 1227.24 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
88. TPM4 ENSG00000167460 479.03 1223.15 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
89. RPL39 ENSG00000198918 477.43 1219.07 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
90. MARCKS ENSG00000277443 469.42 1198.61 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
91. PRKAR1A ENSG00000108946 464.61 1186.33 protein kinase cAMP-dependent type I regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9388]
92. H2AFZ ENSG00000164032 458.20 1169.97 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
93. SPINT2 ENSG00000167642 453.40 1157.71 serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
94. TRMT112 ENSG00000173113 450.19 1149.51 tRNA methyltransferase subunit 11-2 [Source:HGNC Symbol;Acc:HGNC:26940]
95. RPS13 ENSG00000110700 445.38 1137.23 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
96. HNRNPA1 ENSG00000135486 443.78 1133.15 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
97. EEF1B2 ENSG00000114942, ENSG00000283391 437.37 1116.78 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
98. PXDN ENSG00000130508 435.77 1112.69 peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
99. PCBP2 ENSG00000197111 432.57 1104.52 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
100. SRSF2 ENSG00000161547 432.57 1104.52 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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