Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_3, section s49.

Sample reads: 124,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4199.69 33803.00
2. HBG1 HBG1 3149.77 25352.27
3. MT-ATP6 MT-ATP6 3149.77 25352.27
4. HBE 2799.80 22535.39 hemoglobin subunit epsilon
5. MT-CYB MT-CYB 2799.80 22535.39
6. MT-ND4 MT-ND4 2799.80 22535.39
7. EEF1A EEF1A 2449.82 19718.42
8. GAPDH ENSGALG00000014442 2449.82 19718.42 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
9. MT-CO1 MT-CO1 2449.82 19718.42
10. HBZ ENSGALG00000023740 2099.85 16901.54 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
11. EIF2S1 ENSGALG00000009565 1749.87 14084.58 eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
12. MT-ND3 MT-ND3 1749.87 14084.58
13. gga-mir-3527 gga-mir-3527 1749.87 14084.58
14. RPS12 ENSGALG00000013990 1399.90 11267.69 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
15. gga-mir-3533 ENSGALG00000027736 1399.90 11267.69 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
16. MT-ND5 MT-ND5 1049.92 8450.73
17. PPIA ENSGALG00000028600 1049.92 8450.73 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
18. RPS24 ENSGALG00000004871 1049.92 8450.73 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
19. AGPAT3 ENSGALG00000031932 699.95 5633.85 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
20. C1H12ORF23 C1H12ORF23 699.95 5633.85
21. CHERP ENSGALG00000003824 699.95 5633.85 calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
22. COX4I1 699.95 5633.85 cytochrome c oxidase subunit 4I1, transcript variant X1
23. COX7A2 ENSGALG00000015906 699.95 5633.85 cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
24. ENO1 ENSGALG00000002377 699.95 5633.85 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
25. ENSGALG00000002696 ENSGALG00000002696 699.95 5633.85
26. ENSGALG00000028992 ENSGALG00000028992 699.95 5633.85
27. GNB2L1 ENSGALG00000000122 699.95 5633.85 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
28. HDLBP ENSGALG00000005823 699.95 5633.85 high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
29. HMGB1 ENSGALG00000042875 699.95 5633.85 high mobility group box 1 [Source:NCBI gene;Acc:395724]
30. HP1BP3 ENSGALG00000010079 699.95 5633.85 heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
31. IGF2BP3 ENSGALG00000010961 699.95 5633.85 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
32. IPO7 ENSGALG00000005807 699.95 5633.85 importin 7 [Source:HGNC Symbol;Acc:HGNC:9852]
33. KCTD2 ENSGALG00000007934 699.95 5633.85 potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
34. NDUFB9 ENSGALG00000042242 699.95 5633.85 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
35. NME2 ENSGALG00000002932 699.95 5633.85 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
36. PLOD2 ENSGALG00000006783 699.95 5633.85 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
37. PRDX1 ENSGALG00000010243 699.95 5633.85 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
38. RAN ENSGALG00000002569 699.95 5633.85 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
39. RPL18A 699.95 5633.85 ribosomal protein L18a
40. RPL21 ENSGALG00000027035 699.95 5633.85 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
41. RPL26 RPL26 699.95 5633.85
42. RPL27A ENSGALG00000005948 699.95 5633.85 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
43. RPL31 ENSGALG00000016775 699.95 5633.85 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
44. RPS16 ENSGALG00000026490 699.95 5633.85 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
45. RPS20 ENSGALG00000014432 699.95 5633.85 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
46. RPS4 RPS4 699.95 5633.85
47. RPS7 ENSGALG00000016392 699.95 5633.85 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
48. TXN ENSGALG00000015704 699.95 5633.85 thioredoxin [Source:NCBI gene;Acc:396437]
49. ACAD9 ENSGALG00000005034 349.97 2816.88 acyl-CoA dehydrogenase family member 9 [Source:NCBI gene;Acc:415974]
50. ACTG1_1 ENSGALG00000001381 349.97 2816.88 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
51. ALDH4A1 ENSGALG00000042184 349.97 2816.88 aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
52. ANP32E ENSGALG00000039891 349.97 2816.88 acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
53. ANXA11 ENSGALG00000043826 349.97 2816.88 annexin A11 [Source:NCBI gene;Acc:423637]
54. ARHGDIA ENSGALG00000008443 349.97 2816.88 Rho GDP dissociation inhibitor alpha [Source:NCBI gene;Acc:769231]
55. ARL6IP4 ENSGALG00000003682 349.97 2816.88 ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
56. ASUN ASUN 349.97 2816.88
57. ATP5F1 349.97 2816.88 ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
58. ATP5L ENSGALG00000006899 349.97 2816.88 ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
59. ATP6V1G1 ENSGALG00000007190 349.97 2816.88 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
60. BRP44L BRP44L 349.97 2816.88
61. C26H6ORF125 ENSGALG00000002881 349.97 2816.88 chromosome 26 open reading frame, human C6orf125 [Source:NCBI gene;Acc:419909]
62. C5H11ORF58 C5H11ORF58 349.97 2816.88
63. CALM CALM 349.97 2816.88
64. CCDC12 ENSGALG00000005487 349.97 2816.88 coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
65. CCDC93 ENSGALG00000012129 349.97 2816.88 coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
66. CDC26 ENSGALG00000026095 349.97 2816.88 cell division cycle 26 [Source:NCBI gene;Acc:417269]
67. CDC42 ENSGALG00000004796 349.97 2816.88 cell division cycle 42 [Source:NCBI gene;Acc:395917]
68. CDCA2 ENSGALG00000045842 349.97 2816.88 cell division cycle associated 2, transcript variant X3
69. CDK1 ENSGALG00000003085 349.97 2816.88 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
70. CENPW ENSGALG00000027454 349.97 2816.88 centromere protein W [Source:NCBI gene;Acc:421716]
71. CIRBP ENSGALG00000030918 349.97 2816.88 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
72. CIRH1A CIRH1A 349.97 2816.88
73. COX7B ENSGALG00000007863 349.97 2816.88 cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
74. COX7C ENSGALG00000027963 349.97 2816.88 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
75. CRHOA CRHOA 349.97 2816.88
76. CZH9ORF100 CZH9ORF100 349.97 2816.88
77. DDX3X ENSGALG00000016231 349.97 2816.88 DEAD-box helicase 3 X-linked [Source:NCBI gene;Acc:418567]
78. DSTN ENSGALG00000008667 349.97 2816.88 destrin, actin depolymerizing factor [Source:NCBI gene;Acc:396539]
79. DYNLRB1 ENSGALG00000034509 349.97 2816.88 dynein light chain roadblock-type 1
80. ECI1 ENSGALG00000031563 349.97 2816.88 enoyl-CoA delta isomerase 1 [Source:NCBI gene;Acc:416657]
81. EDEM2 ENSGALG00000003128 349.97 2816.88 ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
82. EEF1E1 ENSGALG00000012781 349.97 2816.88 eukaryotic translation elongation factor 1 epsilon 1
83. EIF2B3 ENSGALG00000010140 349.97 2816.88 eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
84. EIF3F ENSGALG00000005326 349.97 2816.88 eukaryotic translation initiation factor 3 subunit F
85. EIF3J ENSGALG00000008187 349.97 2816.88 eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
86. EIF3L ENSGALG00000012296 349.97 2816.88 eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
87. EIF4A2 ENSGALG00000008684 349.97 2816.88 eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
88. EIF5A2 ENSGALG00000009309 349.97 2816.88 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
89. EMCN EMCN 349.97 2816.88
90. ENSGALG00000009044 ENSGALG00000009044 349.97 2816.88
91. ENSGALG00000018384 ENSGALG00000018384 349.97 2816.88
92. ENSGALG00000023314 ENSGALG00000023314 349.97 2816.88
93. ENSGALG00000027854 ENSGALG00000027854 349.97 2816.88
94. FKBP25 FKBP25 349.97 2816.88
95. FKBP4 ENSGALG00000014331 349.97 2816.88 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
96. FOPNL ENSGALG00000006532 349.97 2816.88 FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
97. FRZB ENSGALG00000002763 349.97 2816.88 frizzled related protein [Source:NCBI gene;Acc:395545]
98. FTH FTH 349.97 2816.88
99. GCLM ENSGALG00000005782 349.97 2816.88 glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
100. GMNN ENSGALG00000013626 349.97 2816.88 geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA