Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for zc2hc1a

Gene Name Gene ID Reads Annotation
zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]










Genes with expression patterns similar to zc2hc1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
2. rnf11a ENSDARG00000010442 592 2.524 0.927 0.762 - - - 0.835 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
3. srp19 ENSDARG00000035699 2624 2.449 0.924 - - 0.807 - - 0.718 - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
4. bcr ENSDARG00000079286 578 2.445 - - - 0.786 - 0.888 - 0.771 - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
5. TTYH1 ENSDARG00000076804 399 2.415 - - - 0.794 - 0.861 - 0.760 - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
6. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 2.288 0.826 0.727 - - - - 0.735 - - FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
7. C20H12orf57 C20H12orf57 3325 2.223 - - - - - 0.734 0.787 0.702 -
8. fam155a ENSDARG00000075858 91 1.794 0.952 - - - - 0.842 - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
9. pycr1 pycr1 1258 1.792 0.952 - - - - 0.840 - - -
10. thap4 ENSDARG00000077323 434 1.774 0.946 - - - - 0.828 - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
11. rnpep ENSDARG00000012506, ENSDARG00000110262 516 1.76 0.912 0.848 - - - - - - - arginyl aminopeptidase (aminopeptidase B) [Source:ZFIN;Acc:ZDB-GENE-040718-241]
12. wdr35 ENSDARG00000069269 492 1.73 0.948 - - 0.782 - - - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
13. SCML2 ENSDARG00000012949 1310 1.725 0.910 - - - - - 0.815 - - Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
14. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.719 0.936 - - - - 0.783 - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
15. iah1 ENSDARG00000015765 326 1.718 0.944 - - - - 0.774 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
16. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.714 0.950 - - 0.764 - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
17. her15.2 her15.2 1701 1.709 0.861 - - - - 0.848 - - -
18. actr5 ENSDARG00000098235 237 1.703 0.954 - - - - 0.749 - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
19. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.695 0.943 - - - - 0.752 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
20. hspbp1 ENSDARG00000102937 260 1.687 0.890 - - - - 0.797 - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
21. arglu1b ENSDARG00000018319 1110 1.686 0.942 - - - - 0.744 - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
22. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.671 - - - - - 0.855 - 0.816 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
23. kif1b ENSDARG00000037020 2124 1.667 0.954 0.713 - - - - - - - kinesin family member 1B [Source:ZFIN;Acc:ZDB-GENE-030820-1]
24. bcl7bb ENSDARG00000040396, ENSDARG00000116093 764 1.665 0.902 - - - - - 0.763 - - BCL tumor suppressor 7Bb [Source:ZFIN;Acc:ZDB-GENE-010328-17]
25. rerea ENSDARG00000077353 4162 1.659 0.870 - - - - 0.789 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
26. lzic ENSDARG00000055899 638 1.657 0.946 0.711 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
27. smarcc1a ENSDARG00000017397 2957 1.655 0.893 - - - - 0.762 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
28. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.654 - - - - - 0.860 0.794 - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
29. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 1.641 0.924 - - 0.717 - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
30. CR936200.1 CR936200.1 327 1.641 - - - 0.825 - 0.816 - - -
31. bmpr1ba ENSDARG00000104100 828 1.631 0.895 - - 0.736 - - - - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
32. lmbrd1 ENSDARG00000104223 924 1.629 - - - - - 0.832 0.797 - - LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
33. calhm2 ENSDARG00000039482 138 1.623 - - - 0.814 - 0.809 - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
34. hmp19 2554 1.617 - - - - - 0.766 - 0.851 - HMP19 protein
35. DENND6A DENND6A 648 1.614 - - - - - 0.777 0.837 - -
36. cnrip1a ENSDARG00000091683 1491 1.612 - - - - - 0.848 - 0.764 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
37. flrt3 ENSDARG00000076895 3516 1.611 - - - 0.768 - 0.843 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
38. brms1 ENSDARG00000051955 900 1.61 - - - - - - 0.849 - 0.761 BRMS1, transcriptional repressor and anoikis regulator [Source:ZFIN;Acc:ZDB-GENE-030616-596]
39. TRIM14 TRIM14 1424 1.608 0.904 - - 0.704 - - - - -
40. LIN9 ENSDARG00000028475 227 1.607 - 0.778 - - - 0.829 - - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
41. magi1b ENSDARG00000003169 2056 1.605 0.875 - - - - 0.730 - - - membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
42. usb1 ENSDARG00000003841 524 1.602 - - - 0.818 - 0.784 - - - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
43. glipr2l ENSDARG00000016837 440 1.602 0.862 - - - - 0.740 - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
44. DACT3_1 DACT3_1 1235 1.601 - - - - - 0.854 - 0.747 -
45. kdm4b ENSDARG00000099675 2037 1.6 0.887 - - - - - - - 0.713 lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
46. RBM6 ENSDARG00000077060 3521 1.6 0.866 - - - - 0.734 - - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
47. ADAM22 ENSDARG00000060532 2259 1.598 - - - - - 0.809 - 0.789 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
48. st18 663 1.596 - - - - - 0.818 - 0.778 - suppression of tumorigenicity 18, zinc finger
49. rbms3 ENSDARG00000044574 2514 1.595 - - - 0.782 - 0.813 - - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
50. KAT5 KAT5 623 1.595 - - - - - 0.840 - - 0.755
51. ube2d1b ENSDARG00000038576 5971 1.591 0.755 - - - - 0.836 - - - ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
52. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 1.588 - - - 0.757 - - 0.831 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
53. fam60al_1 949 1.585 - - - - - 0.841 - 0.744 - family with sequence similarity 60, member A, like
54. usp25 ENSDARG00000012314 734 1.582 - - - 0.774 - - 0.808 - - ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]
55. SB:CB827 SB:CB827 245 1.581 - - - - - 0.777 0.804 - -
56. chaf1b ENSDARG00000056473 880 1.576 - - - - - - 0.826 - 0.750 chromatin assembly factor 1, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1947]
57. tuba2 ENSDARG00000045014 1490 1.576 - - - - - 0.831 - 0.745 - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
58. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 1.575 0.837 - - - - - - 0.738 - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
59. spsb4a ENSDARG00000016084, ENSDARG00000116235 544 1.575 - - - 0.820 - - 0.755 - - splA/ryanodine receptor domain and SOCS box containing 4a [Source:ZFIN;Acc:ZDB-GENE-070911-3]
60. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.574 0.873 - - - - - - 0.701 - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
61. gltscr1l gltscr1l 782 1.573 - - - - - 0.818 - - 0.755
62. ccnb3 ENSDARG00000034855, ENSDARG00000110875 2123 1.571 0.857 - - - - 0.714 - - - cyclin B3 [Source:ZFIN;Acc:ZDB-GENE-060929-684]
63. mknk2b ENSDARG00000015164 2158 1.57 0.745 - - - - 0.825 - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
64. usp1 ENSDARG00000056414 1816 1.569 - - - - - 0.809 0.760 - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
65. gabpb2a ENSDARG00000007943 1570 1.567 - - - - - 0.802 0.765 - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
66. rfc3 ENSDARG00000055969, ENSDARG00000112402 1448 1.564 - - - - - - 0.715 0.849 - replication factor C (activator 1) 3 [Source:ZFIN;Acc:ZDB-GENE-020809-3]
67. tnni2a.2 ENSDARG00000005841 483 1.561 - - - 0.786 - 0.775 - - - troponin I type 2a (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-970]
68. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1.558 - 0.766 - - - 0.792 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
69. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.554 0.841 - - - - 0.713 - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
70. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.55 - - - - - 0.817 - 0.733 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
71. TMEM57 TMEM57 260 1.548 - - - - - 0.843 - 0.705 -
72. rac3b ENSDARG00000020795 1523 1.546 - - - - - 0.803 - 0.743 - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
73. CR774184.1 ENSDARG00000096891 404 1.546 - 0.782 - - - 0.764 - - -
74. fscn1a ENSDARG00000059680 3999 1.546 - - - - - 0.835 - 0.711 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
75. RNF38 ENSDARG00000062055 3901 1.546 - - - - - 0.836 - 0.710 - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
76. rcor2 ENSDARG00000008278 1678 1.544 - - - - - 0.765 - 0.779 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
77. CR848664.2 CR848664.2 876 1.544 - 0.806 - - - 0.738 - - -
78. BX539313.4 BX539313.4 1858 1.537 - - - - - - 0.718 0.819 -
79. ppt2 ENSDARG00000104542 888 1.536 - - - - - 0.731 0.805 - - palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
80. khsrp ENSDARG00000026489 15738 1.531 - - - - - 0.738 0.793 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
81. sap30bp ENSDARG00000031261 1348 1.529 - 0.747 - - - - 0.782 - - SAP30 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-457]
82. cry2a cry2a 2728 1.527 0.790 - - - - - - 0.737 -
83. atat1 ENSDARG00000004472 700 1.526 - - - - - 0.819 - 0.707 - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
84. smarca2 ENSDARG00000008904, ENSDARG00000115738 644 1.525 - 0.816 - 0.709 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]
85. npm1b ENSDARG00000037675 5448 1.523 - - - - - 0.790 - 0.733 - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
86. dopey1 438 1.523 - - - 0.778 - 0.745 - - - dopey family member 1, transcript variant X4
87. igsf9a ENSDARG00000075864 1870 1.522 - - - - 0.716 0.806 - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
88. mamdc1 mamdc1 156 1.522 - - - - - 0.738 0.784 - -
89. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.519 - - - - - 0.704 0.815 - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
90. C7H4orf48 C7H4orf48 1455 1.518 - - - - - 0.777 - 0.741 -
91. scg2b ENSDARG00000038574 345 1.517 - - - - - 0.745 0.772 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
92. fez1 ENSDARG00000023174 701 1.517 - - - - - 0.779 - 0.738 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
93. gtpbp10 ENSDARG00000040300 533 1.513 - - - 0.758 - 0.755 - - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
94. lhx5 ENSDARG00000057936 785 1.512 - - - - - 0.772 - 0.740 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
95. rbfox1 ENSDARG00000014746 2808 1.511 - - - - - 0.724 0.787 - - RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
96. znf592 ENSDARG00000060885 776 1.509 - - - - - 0.734 0.775 - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
97. DBF4B ENSDARG00000086550 374 1.508 - - - - - 0.792 - - 0.716 DBF4 zinc finger B [Source:ZFIN;Acc:ZDB-GENE-121214-269]
98. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 1.505 - 0.708 - - - 0.797 - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
99. EFNA2 EFNA2 640 1.502 - 0.747 - - 0.755 - - - -
100. r3hcc1l ENSDARG00000089243 1254 1.501 - - - - - 0.763 - - 0.738 R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]

There are 2101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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