Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vamp5

Gene Name Gene ID Reads Annotation
vamp5 ENSDARG00000068262 2413 vesicle-associated membrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4209]










Genes with expression patterns similar to vamp5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vamp5 ENSDARG00000068262 2413 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vesicle-associated membrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4209]
2. prkab1b ENSDARG00000046143 8640 1.84 - - - - - 0.981 0.859 - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, b [Source:ZFIN;Acc:ZDB-GENE-030131-7172]
3. pafah1b1a ENSDARG00000032013 3183 1.808 - - - - - 0.997 0.811 - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
4. PPAP2A PPAP2A 2409 1.752 0.753 - - - - 0.999 - - -
5. acvr1b acvr1b 2963 1.743 - 0.747 - - - 0.996 - - -
6. ccnd2a ENSDARG00000051748 2506 1.731 - 0.736 - - - 0.995 - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
7. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 1.729 0.732 - - - - 0.997 - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
8. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.62 - 0.735 - - - 0.885 - - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
9. hmox2a ENSDARG00000055101, ENSDARG00000114695 815 1.604 - 0.745 - - - - 0.859 - - heme oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-040914-13]
10. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 1.571 - 0.788 - - - - 0.783 - - histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]
11. cald1l cald1l 4115 1.571 - 0.721 - - - - 0.850 - -
12. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 1.546 - 0.727 - - - - 0.819 - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
13. ptbp2a ENSDARG00000101947 1921 1.496 - 0.767 - - - - 0.729 - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
14. ppargc1b ENSDARG00000101569 3452 1.485 - 0.762 - - - - 0.723 - - peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
15. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.485 - 0.721 - - - - 0.764 - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
16. zgc:56064 1275 1.477 - 0.713 - - - - 0.764 - - zgc:56064, transcript variant X1
17. tnfrsf19 ENSDARG00000041869 796 1.468 0.749 - - - - - 0.719 - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
18. erbb3a ENSDARG00000006202 903 1.462 0.754 - - - - - 0.708 - - erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
19. grpel1 ENSDARG00000010021 3055 1.457 - 0.746 - - - 0.711 - - - GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]
20. nt5c2a ENSDARG00000039399 3062 1.455 - 0.702 - - - - 0.753 - - 5'-nucleotidase, cytosolic IIa [Source:ZFIN;Acc:ZDB-GENE-030131-3566]
21. pnpla7b ENSDARG00000040002 1217 1.452 0.728 - - - - - 0.724 - - patatin-like phospholipase domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-050309-66]
22. flt4 ENSDARG00000104453 557 1.439 0.725 - - - - - 0.714 - - fms-related tyrosine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-980526-326]
23. si:ch211-183d21.1 ENSDARG00000092499 1071 1.427 0.706 - - - - - 0.721 - - si:ch211-183d21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-8516]
24. RNF130 ENSDARG00000089767 559 1.411 - 0.700 - - - - 0.711 - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
25. acat1 ENSDARG00000045888 1488 1.404 - 0.703 - - - - 0.701 - - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
26. ifi30 ENSDARG00000056378, ENSDARG00000112359 2472 0.999 - - - - - 0.999 - - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
27. b4galt1 ENSDARG00000002634 1076 0.999 - - - - - 0.999 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
28. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 0.999 - - - - - 0.999 - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
29. tmem183a ENSDARG00000044899 491 0.999 - - - - - 0.999 - - - transmembrane protein 183A [Source:ZFIN;Acc:ZDB-GENE-050327-5]
30. txndc11 ENSDARG00000101291 589 0.999 - - - - - 0.999 - - - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
31. ankrd13a ENSDARG00000061901 1192 0.999 - - - - - 0.999 - - - ankyrin repeat domain 13A [Source:ZFIN;Acc:ZDB-GENE-030131-1833]
32. csrp1a ENSDARG00000006603 5188 0.999 - - - - - 0.999 - - - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
33. pax5 ENSDARG00000037383 319 0.999 - - - - - 0.999 - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
34. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.999 - - - - - 0.999 - - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
35. sptlc2b ENSDARG00000074287 1853 0.999 - - - - - 0.999 - - - serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
36. grip1 ENSDARG00000015053 1275 0.999 - - - - - 0.999 - - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
37. fam84b ENSDARG00000032859, ENSDARG00000116831 386 0.999 - - - - - 0.999 - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
38. acaa1 ENSDARG00000004687 557 0.999 - - - - - 0.999 - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
39. usp36 ENSDARG00000032327 1884 0.999 - - - - - 0.999 - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
40. ppp2r5eb ENSDARG00000069118 1902 0.999 - - - - - 0.999 - - - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
41. mea1 ENSDARG00000039820 589 0.999 - - - - - 0.999 - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
42. GIGYF1 1830 0.998 - - - - - 0.998 - - - GRB10 interacting GYF protein 1, transcript variant X6
43. CDS1 ENSDARG00000019549 1659 0.998 - - - - - 0.998 - - - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 [Source:ZFIN;Acc:ZDB-GENE-070705-78]
44. her9 ENSDARG00000056438, ENSDARG00000115775 3099 0.998 - - - - - 0.998 - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
45. cbsa ENSDARG00000053500, ENSDARG00000112676 792 0.998 - - - - - 0.998 - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
46. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 0.998 - - - - - 0.998 - - - retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
47. gdpd3a ENSDARG00000074466 1739 0.998 - - - - - 0.998 - - - glycerophosphodiester phosphodiesterase domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2279]
48. si:dkeyp-73a2.2 ENSDARG00000079785 313 0.998 - - - - - 0.998 - - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
49. zgc:112148 ENSDARG00000001804 386 0.998 - - - - - 0.998 - - - zgc:112148 [Source:ZFIN;Acc:ZDB-GENE-050417-235]
50. l2hgdh ENSDARG00000060500 713 0.998 - - - - - 0.998 - - - L-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-090319-6]
51. cab39 ENSDARG00000043451 1326 0.998 - - - - - 0.998 - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
52. evla ENSDARG00000035650 854 0.998 - - - - - 0.998 - - - Enah/Vasp-like a [Source:ZFIN;Acc:ZDB-GENE-000607-65]
53. grhl1 ENSDARG00000061391 1494 0.998 - - - - - 0.998 - - - grainyhead-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3665]
54. socs3a ENSDARG00000025428 349 0.998 - - - - - 0.998 - - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
55. si:ch211-138k19.2 si:ch211-138k19.2 398 0.998 - - - - - 0.998 - - -
56. insra ENSDARG00000011948 1258 0.998 - - - - - 0.998 - - - insulin receptor a [Source:ZFIN;Acc:ZDB-GENE-020503-3]
57. ube2z ENSDARG00000029215 1059 0.998 - - - - - 0.998 - - - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
58. PLCL2 ENSDARG00000098826 596 0.998 - - - - - 0.998 - - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
59. efemp2a ENSDARG00000094324 39261 0.998 - - - - - 0.998 - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
60. CU929219.1 CU929219.1 383 0.998 - - - - - 0.998 - - -
61. trappc5 ENSDARG00000026068 1350 0.998 - - - - - 0.998 - - - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
62. plekhh1 ENSDARG00000053835 2123 0.998 - - - - - 0.998 - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
63. CZv9_NA991H1orf52 CZv9_NA991H1orf52 1723 0.998 - - - - - 0.998 - - -
64. cpz ENSDARG00000075521 2356 0.998 - - - - - 0.998 - - - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
65. stra6 ENSDARG00000051874, ENSDARG00000115031 1625 0.998 - - - - - 0.998 - - - stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]
66. cdk13 ENSDARG00000076791 828 0.998 - - - - - 0.998 - - - cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]
67. HOMER2 ENSDARG00000059349 2264 0.998 - - - - - 0.998 - - - homer scaffold protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-417]
68. gsr ENSDARG00000019236, ENSDARG00000114106 1149 0.997 - - - - - 0.997 - - - glutathione reductase [Source:ZFIN;Acc:ZDB-GENE-050522-116]
69. MRPL52 ENSDARG00000090568 4402 0.997 - - - - - 0.997 - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
70. gbx1 ENSDARG00000071418 871 0.997 - - - - - 0.997 - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
71. BX897684.1 BX897684.1 636 0.996 - - - - - 0.996 - - -
72. slc2a3a ENSDARG00000013295 2449 0.996 - - - - - 0.996 - - - solute carrier family 2 (facilitated glucose transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-040718-390]
73. ddx6 ENSDARG00000061338 2514 0.996 - - - - - 0.996 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
74. PIK3CA_1 PIK3CA_1 4065 0.996 - - - - - 0.996 - - -
75. rorca ENSDARG00000057231, ENSDARG00000111082 894 0.996 - - - - - 0.996 - - - RAR-related orphan receptor C a [Source:ZFIN;Acc:ZDB-GENE-990415-250]
76. dctn3 ENSDARG00000041363 3351 0.996 - - - - - 0.996 - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
77. ctnnd1 ENSDARG00000078233 2520 0.996 - - - - - 0.996 - - - catenin (cadherin-associated protein), delta 1 [Source:ZFIN;Acc:ZDB-GENE-110208-9]
78. slc25a12 ENSDARG00000102362 2773 0.996 - - - - - 0.996 - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
79. rnf183 ENSDARG00000068851 2427 0.995 - - - - - 0.995 - - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
80. atp1a1a.1 ENSDARG00000002791 7392 0.995 - - - - - 0.995 - - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-001212-1]
81. CCDC86 CCDC86 2023 0.995 - - - - - 0.995 - - -
82. farsa ENSDARG00000098825 2813 0.995 - - - - - 0.995 - - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
83. fbxw5 ENSDARG00000099139 2802 0.995 - - - - - 0.995 - - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
84. msrb1b ENSDARG00000045160, ENSDARG00000062442, ENSDARG00000115408 1682 0.995 - - - - - 0.995 - - - methionine sulfoxide reductase B1b [Source:ZFIN;Acc:ZDB-GENE-040912-88]
85. si:dkey-17e16.17 615 0.995 - - - - - 0.995 - - - si:dkey-17e16.17
86. gmds ENSDARG00000026629 3976 0.995 - - - - - 0.995 - - - GDP-mannose 4,6-dehydratase [Source:ZFIN;Acc:ZDB-GENE-050419-45]
87. ppm1h ENSDARG00000063684 1446 0.995 - - - - - 0.995 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1H [Source:ZFIN;Acc:ZDB-GENE-061027-190]
88. PCBP4 ENSDARG00000024276 3194 0.995 - - - - - 0.995 - - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
89. si:ch211-114n24.7 si:ch211-114n24.7 2544 0.994 - - - - - 0.994 - - -
90. zgc:195001 ENSDARG00000070484 3281 0.994 - - - - - 0.994 - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
91. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.994 - - - - - 0.994 - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
92. slc4a1a ENSDARG00000012881 8972 0.994 - - - - - 0.994 - - - solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
93. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 0.993 - - - - - 0.993 - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
94. tuba1b ENSDARG00000045367 8485 0.993 - - - - - 0.993 - - - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
95. gys1 ENSDARG00000016875 2037 0.992 - - - - - 0.992 - - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
96. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 0.992 - - - - - 0.992 - - - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
97. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 0.992 - - - - - 0.992 - - - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
98. trappc1 ENSDARG00000039005 6990 0.992 - - - - - 0.992 - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
99. clvs2 ENSDARG00000053122 1390 0.992 - - - - - 0.992 - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
100. irx3a ENSDARG00000101076 3106 0.991 - - - - - 0.991 - - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]

There are 698 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA