Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for use1

Gene Name Gene ID Reads Annotation
use1 ENSDARG00000007250 824 unconventional SNARE in the ER 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1015]










Genes with expression patterns similar to use1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. use1 ENSDARG00000007250 824 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 unconventional SNARE in the ER 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1015]
2. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 1.624 - - - - - - 0.711 0.913 - kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
3. CHMP4B CHMP4B 1387 1.6 - - - - - - 0.711 0.889 -
4. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 1.592 - - - - - - 0.703 0.889 - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
5. pcif1 ENSDARG00000099084 2851 1.59 - - - - - 0.704 - 0.886 - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
6. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 1.54 - 0.805 - - - - - - 0.735 ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
7. cd248b ENSDARG00000077938 2561 1.53 - - - - - 0.702 - 0.828 - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
8. ralbp1 ENSDARG00000078653 2440 1.508 - - - - - 0.707 - 0.801 - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
9. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 1.475 - 0.709 - - - - - 0.766 - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
10. srprb ENSDARG00000030949 1670 1.454 - - - - - 0.724 - - 0.730 SRP receptor subunit beta [Source:ZFIN;Acc:ZDB-GENE-040718-311]
11. ttc12 ENSDARG00000056896 97 1.454 - - - 0.704 0.750 - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
12. mfap1 ENSDARG00000018241 833 0.972 - - - - - - - 0.972 - microfibril associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1075]
13. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 0.966 - - - - - - - 0.966 - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
14. MON2 ENSDARG00000099798 2359 0.966 - - - - - - - 0.966 - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
15. BX957337.1 BX957337.1 1685 0.964 - - - - - - - 0.964 -
16. acy1 ENSDARG00000038475, ENSDARG00000111129 576 0.963 - - - - - - - 0.963 - aminoacylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-755]
17. arrb2b ENSDARG00000011545 3126 0.961 - - - - - - - 0.961 - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
18. pinx1 ENSDARG00000023532 4452 0.955 - - - - - - - 0.955 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
19. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 0.954 - - - - - - - 0.954 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
20. pcyt1aa ENSDARG00000011233 1985 0.953 - - - - - - - 0.953 - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
21. mthfd2_1 ENSDARG00000098646, ENSDARG00000112356, ENSDARG00000117060 2390 0.953 - - - - - - - 0.953 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-040704-20]
22. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 0.952 - - - - - - - 0.952 - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
23. foxp1a ENSDARG00000004843 3961 0.949 - - - - - - - 0.949 - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
24. impdh1b ENSDARG00000029524 7472 0.946 - - - - - - - 0.946 - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
25. top2a ENSDARG00000024488 4273 0.941 - - - - - - - 0.941 - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
26. b4galt7 ENSDARG00000021899 546 0.941 - - - - - - - 0.941 - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
27. arf1l arf1l 9119 0.941 - - - - - - - 0.941 -
28. taf11 ENSDARG00000037855 2624 0.937 - - - - - - - 0.937 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
29. si:ch211-79l20.4 1305 0.936 - - - - - - - 0.936 - si:ch211-79l20.4, transcript variant X3
30. CR387996.1 ENSDARG00000097774 3037 0.936 - - - - - - - 0.936 -
31. scmh1 ENSDARG00000104311, ENSDARG00000110119 413 0.935 - - - - - - - 0.935 - Scm polycomb group protein homolog 1 [Source:ZFIN;Acc:ZDB-GENE-070410-82]
32. zgc:171220 ENSDARG00000102959 164 0.935 - - - - - - - 0.935 - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
33. cdk7 ENSDARG00000051916 746 0.935 - - - - - - - 0.935 - cyclin-dependent kinase 7 [Source:ZFIN;Acc:ZDB-GENE-010320-2]
34. arih2 ENSDARG00000012848 7087 0.935 - - - - - - - 0.935 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
35. LPL_1 LPL_1 1150 0.935 - - - - - - - 0.935 -
36. aebp1 ENSDARG00000091726 906 0.933 - - - - - - - 0.933 - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
37. rab5aa ENSDARG00000018602 8947 0.933 - - - - - - - 0.933 - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
38. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 0.933 - - - - - - - 0.933 - protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
39. c1d ENSDARG00000021112 2839 0.933 - - - - - - - 0.933 - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
40. LTN1 ENSDARG00000003984 1076 0.932 - - - - - - - 0.932 - listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]
41. xkr6 xkr6 286 0.931 - - - - - - - 0.931 -
42. XKR7 ENSDARG00000026333 175 0.931 - - - - - - - 0.931 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
43. BX322612.1 BX322612.1 236 0.931 - - - - - - - 0.931 -
44. chd5 ENSDARG00000105083 132 0.931 - - - - - - - 0.931 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
45. ZNF784_2 ZNF784_2 181 0.931 - - - - - - - 0.931 -
46. KIRREL3 ENSDARG00000115903 206 0.931 - - - - - - - 0.931 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
47. si:ch211-209n20.57 si:ch211-209n20.57 1188 0.931 - - - - - - - 0.931 -
48. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.931 - - - - - - - 0.931 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
49. ift20 ENSDARG00000040556 285 0.93 - - - - - - - 0.930 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
50. ppp1r8 ppp1r8 310 0.93 - - - - - - - 0.930 -
51. anapc5 ENSDARG00000008461 434 0.93 - - - - - - - 0.930 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
52. eef1a1a ENSDARG00000039502 234 0.93 - - - - - - - 0.930 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
53. grna ENSDARG00000004954 189 0.93 - - - - - - - 0.930 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
54. SIPA1L3 ENSDARG00000061699 268 0.93 - - - - - - - 0.930 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
55. rapgef1a ENSDARG00000043593 416 0.93 - - - - - - - 0.930 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
56. DEDD ENSDARG00000029783 530 0.929 - - - - - - - 0.929 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
57. zgc:171727 ENSDARG00000105781 350 0.929 - - - - - - - 0.929 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
58. psmd5 ENSDARG00000059046 622 0.929 - - - - - - - 0.929 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
59. wdr92 ENSDARG00000037334 329 0.929 - - - - - - - 0.929 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
60. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.929 - - - - - - - 0.929 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
61. TTC28 ENSDARG00000114920 580 0.929 - - - - - - - 0.929 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
62. si:ch211-195b13.1 ENSDARG00000016623 427 0.929 - - - - - - - 0.929 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
63. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.929 - - - - - - - 0.929 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
64. lrrc4.2 ENSDARG00000003020 235 0.929 - - - - - - - 0.929 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
65. wdr47a ENSDARG00000078136 522 0.928 - - - - - - - 0.928 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
66. sh3bp5a ENSDARG00000100529 642 0.928 - - - - - - - 0.928 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
67. mapre3b ENSDARG00000102878 362 0.928 - - - - - - - 0.928 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
68. pold3 ENSDARG00000076169 694 0.928 - - - - - - - 0.928 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
69. SB:CB827 SB:CB827 245 0.928 - - - - - - - 0.928 -
70. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.928 - - - - - - - 0.928 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
71. nkain4 ENSDARG00000062699 377 0.928 - - - - - - - 0.928 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
72. TDG TDG 1191 0.927 - - - - - - - 0.927 -
73. MANEAL ENSDARG00000056450 262 0.927 - - - - - - - 0.927 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
74. dok7 ENSDARG00000060236 364 0.927 - - - - - - - 0.927 - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
75. bsk146 ENSDARG00000099069 274 0.927 - - - - - - - 0.927 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
76. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.927 - - - - - - - 0.927 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
77. plk4 ENSDARG00000004576 688 0.927 - - - - - - - 0.927 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
78. irf2a ENSDARG00000007387 915 0.927 - - - - - - - 0.927 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
79. THEM4 ENSDARG00000061621 364 0.927 - - - - - - - 0.927 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
80. map7d2b ENSDARG00000045316 702 0.927 - - - - - - - 0.927 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
81. GANAB_1 GANAB_1 685 0.926 - - - - - - - 0.926 -
82. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.926 - - - - - - - 0.926 - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
83. phf12a ENSDARG00000074303 1025 0.926 - - - - - - - 0.926 - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
84. sgsm3 ENSDARG00000019038 352 0.926 - - - - - - - 0.926 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
85. ghitm 1443 0.926 - - - - - - - 0.926 - growth hormone inducible transmembrane protein
86. arhgef10lb ENSDARG00000074244, ENSDARG00000117194 907 0.926 - - - - - - - 0.926 - Rho guanine nucleotide exchange factor (GEF) 10-like b [Source:ZFIN;Acc:ZDB-GENE-090313-222]
87. epb41a ENSDARG00000099283 860 0.926 - - - - - - - 0.926 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
88. cetn2 ENSDARG00000101510 541 0.926 - - - - - - - 0.926 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
89. CR354611.2 CR354611.2 2040 0.926 - - - - - - - 0.926 -
90. PRRT2 ENSDARG00000103588 913 0.926 - - - - - - - 0.926 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
91. tchp ENSDARG00000035605 1695 0.926 - - - - - - - 0.926 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
92. ezh1 ENSDARG00000037894 294 0.926 - - - - - - - 0.926 - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]
93. cul3a ENSDARG00000038967 6155 0.926 - - - - - - - 0.926 - cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
94. CABZ01073424.1 ENSDARG00000107858 688 0.925 - - - - - - - 0.925 -
95. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.925 - - - - - - - 0.925 - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
96. fstl5 ENSDARG00000040198 213 0.924 - - - - - - - 0.924 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
97. ank3a ENSDARG00000061736 361 0.924 - - - - - - - 0.924 - ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]
98. E2F1 ENSDARG00000103868 638 0.924 - - - - - - - 0.924 - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
99. DVL3 1098 0.924 - - - - - - - 0.924 - dishevelled segment polarity protein 3
100. fzd3b ENSDARG00000058692 627 0.924 - - - - - - - 0.924 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]

There are 702 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA