Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ubl3b

Gene Name Gene ID Reads Annotation
ubl3b ENSDARG00000021556 1210 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]










Genes with expression patterns similar to ubl3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubl3b ENSDARG00000021556 1210 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
2. DLC1 ENSDARG00000079317 2149 3.343 - - 0.975 0.770 - 0.719 - - 0.879 DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
3. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 3.334 - 0.775 0.920 - - - 0.789 - 0.850 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
4. phf10 ENSDARG00000070084 1210 2.765 - - 0.977 0.866 - - - - 0.922 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
5. rbm25 rbm25 3629 2.492 - 0.781 0.907 - - - 0.804 - -
6. hnrnpr ENSDARG00000014569 3423 2.479 - - 0.929 - - 0.705 0.845 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
7. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 2.472 - - 0.948 - - - 0.750 - 0.774 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
8. cars ENSDARG00000036164 2019 2.453 - 0.727 0.945 - - - - - 0.781 cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
9. sdad1 ENSDARG00000105117 2819 2.451 - - - 0.792 - - - 0.764 0.895 SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
10. lin54 ENSDARG00000063194 2583 2.449 - - 0.983 - - - 0.710 0.756 - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
11. arhgef4 ENSDARG00000012914 1464 2.425 - 0.788 - - - - - 0.774 0.863 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
12. C10H11orf30 C10H11orf30 1982 2.406 - 0.702 0.983 - - - 0.721 - -
13. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 2.405 - - - 0.874 - - 0.737 0.794 - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
14. plagx ENSDARG00000036855 3768 2.392 - - - 0.839 - - 0.792 - 0.761 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
15. zswim5 ENSDARG00000055900 4243 2.373 - - 0.855 - - 0.749 0.769 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
16. abca1a ENSDARG00000074635 1085 2.348 - 0.748 - 0.722 - - - - 0.878 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
17. ttk ENSDARG00000041361 3911 2.346 - - 0.865 0.733 - - 0.748 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
18. SERBP1 SERBP1 9276 2.339 - - 0.786 - - 0.745 0.808 - -
19. cltcb ENSDARG00000090716 5544 2.329 - - - - - 0.798 0.753 - 0.778 clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
20. scaf4b ENSDARG00000018854 734 2.322 - 0.756 - - - - 0.747 0.819 - SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
21. eif4h ENSDARG00000042252 6742 2.319 - - 0.796 0.762 - - 0.761 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
22. u2af2b ENSDARG00000011740 6946 2.308 - - - - - 0.789 0.705 - 0.814 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
23. pum1 ENSDARG00000099256 5017 2.307 - - 0.855 - - 0.707 0.745 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
24. WAPAL WAPAL 1888 2.304 - - - 0.772 - 0.708 0.824 - -
25. cxxc1l cxxc1l 1035 2.298 - 0.796 - 0.785 - - 0.717 - -
26. scoca ENSDARG00000087333 1739 2.297 - - - 0.766 - - 0.786 0.745 - short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
27. si:ch211-288g17.3 ENSDARG00000070959 2425 2.291 - 0.740 - - - - 0.784 - 0.767 si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
28. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 2.275 - 0.770 - - - - 0.713 0.792 - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
29. sptlc2b ENSDARG00000074287 1853 2.272 - - - 0.738 - - 0.721 - 0.813 serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
30. ints1 ENSDARG00000100419 1958 2.225 0.734 0.709 - - - - 0.782 - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
31. smo ENSDARG00000002952 6411 2.219 - - - 0.812 - 0.701 0.706 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
32. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 2.192 - 0.729 - - - 0.706 0.757 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
33. ANKRD11 ENSDARG00000051886 10024 2.185 - 0.739 - - - 0.729 0.717 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
34. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 2.18 - - - - - 0.736 0.729 0.715 - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
35. smg6 ENSDARG00000100481 493 1.912 - - 0.991 - - - - - 0.921 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
36. HDX ENSDARG00000079382 513 1.908 - - 0.991 - - - - - 0.917 highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
37. zgc:113348 ENSDARG00000103795 1351 1.905 - - 0.987 - - - - - 0.918 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
38. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.892 - - 0.987 - - - - - 0.905 RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
39. eya3 ENSDARG00000036100 1965 1.88 - - 0.971 - - - - - 0.909 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
40. rnf121 ENSDARG00000060282 1809 1.877 - - 0.949 - - - - - 0.928 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
41. CABZ01087568.1 CABZ01087568.1 1487 1.863 - - 0.989 - - - - - 0.874
42. dnajc5ab ENSDARG00000004836 2923 1.847 - - 0.977 0.870 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
43. arhgap24 ENSDARG00000100973 1105 1.844 - 0.866 0.978 - - - - - - Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
44. rexo1 ENSDARG00000026986 770 1.836 - - 0.994 0.842 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
45. xpc ENSDARG00000039754 515 1.833 - - 0.993 0.840 - - - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
46. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.833 - - 0.992 0.841 - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
47. ftsjd2 ftsjd2 2694 1.809 - - 0.957 - - - - - 0.852
48. ahi1 ENSDARG00000044056 951 1.806 - - 0.978 - - - - 0.828 - Abelson helper integration site 1 [Source:ZFIN;Acc:ZDB-GENE-060803-1]
49. dpf2 ENSDARG00000012219 666 1.804 - - 0.983 0.821 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
50. exosc6 ENSDARG00000036060, ENSDARG00000115735 531 1.801 - - 0.982 - - - - 0.819 - exosome component 6 [Source:ZFIN;Acc:ZDB-GENE-050522-362]
51. cpsf1 ENSDARG00000034178 2036 1.798 - - 0.962 - - - - - 0.836 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
52. rbm39b ENSDARG00000041853 1421 1.796 - - 0.990 - - - - 0.806 - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
53. pabpn1 ENSDARG00000045373 4876 1.766 - - - - - - 0.831 - 0.935 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
54. exoc6 ENSDARG00000020521 1533 1.759 - - 0.978 - - - 0.781 - - exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]
55. rbm34 ENSDARG00000101877 1573 1.757 - - - 0.822 - - - - 0.935 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
56. pdcd11 ENSDARG00000052480 2791 1.757 - - - - - - - 0.862 0.895 programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
57. cdan1 ENSDARG00000042261 658 1.757 - - - 0.828 - - - - 0.929 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
58. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.756 - - - - - - - 0.825 0.931 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
59. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 1.748 - - 0.986 - - - 0.762 - - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
60. FBXL3 FBXL3 1769 1.747 - - - 0.861 - - - - 0.886
61. srrm2 ENSDARG00000037965 1967 1.743 - - 0.947 0.796 - - - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
62. triap1 ENSDARG00000014963 646 1.738 - - - - - - 0.812 - 0.926 TP53 regulated inhibitor of apoptosis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-161]
63. syncripl ENSDARG00000026723 3889 1.73 - - - - - - 0.894 - 0.836 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
64. usp49 ENSDARG00000000229 706 1.729 - - - 0.828 - - - - 0.901 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
65. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1.728 0.744 - 0.984 - - - - - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
66. brap ENSDARG00000008560 821 1.728 - 0.733 0.995 - - - - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
67. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.725 - - 0.877 - - - 0.848 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
68. hdac4 ENSDARG00000098349 1370 1.718 - 0.831 - - - - - - 0.887 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
69. ppp2r5eb ENSDARG00000069118 1902 1.715 - - 0.983 - - - - 0.732 - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
70. GTSE1 ENSDARG00000013719 1115 1.711 - - 0.983 - - - 0.728 - - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
71. dmbx1b ENSDARG00000002510 351 1.708 - - - 0.808 - - - - 0.900 diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
72. ddx27 ENSDARG00000091831 1471 1.708 - - 0.972 0.736 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
73. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.708 - - 0.977 - - - - 0.731 - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
74. aftpha ENSDARG00000069249 867 1.707 - - - 0.786 - - - - 0.921 aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
75. tmem2 2572 1.707 - - 0.967 - - - - - 0.740 transmembrane protein 2, transcript variant X1
76. axin2 ENSDARG00000100149 4223 1.706 - 0.751 0.955 - - - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
77. ttc14 ENSDARG00000013845 1192 1.705 - - - 0.806 - - - - 0.899 tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
78. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.702 - - - - - - 0.842 - 0.860 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
79. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.699 - 0.890 - - - - - - 0.809 ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
80. hsbp1a ENSDARG00000069425 1086 1.695 - 0.707 0.988 - - - - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
81. PCBP4 ENSDARG00000024276 3194 1.694 - - 0.979 - - - - 0.715 - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
82. fat1 fat1 3934 1.693 - - 0.896 - - - 0.797 - -
83. ube4b ENSDARG00000037017 8012 1.691 - - 0.971 - - 0.720 - - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
84. xpo1b ENSDARG00000063229 2529 1.688 - - 0.964 - - 0.724 - - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
85. pou3f3a ENSDARG00000042032 2835 1.687 - - 0.913 - - - - 0.774 - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
86. CCDC88C ENSDARG00000053713 1026 1.686 - - - - - - 0.776 - 0.910 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
87. ndc80 ENSDARG00000071694 1162 1.683 - - 0.975 - - - 0.708 - - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
88. nfkbiab ENSDARG00000007693 1345 1.681 - - - 0.801 - - - - 0.880 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
89. zdhhc17 ENSDARG00000070441 1073 1.681 - - - 0.795 - - - - 0.886 zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
90. C3H16orf13 C3H16orf13 652 1.68 - - 0.914 0.766 - - - - -
91. cwc25 ENSDARG00000003382 2134 1.68 - - - 0.806 - - - - 0.874 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
92. ttc1 ENSDARG00000044567 1141 1.678 - - - 0.760 - - - - 0.918 tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
93. nap1l4b ENSDARG00000068868 3285 1.678 - - 0.970 0.708 - - - - - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
94. mrpl37 ENSDARG00000062916 1600 1.674 - - 0.973 - - - 0.701 - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
95. CU861453.1 ENSDARG00000097192 271 1.674 - - - - - - 0.752 - 0.922
96. angptl4 ENSDARG00000035859 2701 1.67 - - - - - - 0.809 - 0.861 angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
97. caly ENSDARG00000036008 1002 1.667 - - - - - - - 0.752 0.915 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
98. sipa1l2 ENSDARG00000061640 4545 1.666 - - 0.939 - - 0.727 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
99. GANAB_1 GANAB_1 685 1.665 - - - 0.732 - - - - 0.933
100. atp2b4 5891 1.663 - - 0.865 - - 0.798 - - - ATPase, Ca++ transporting, plasma membrane 4

There are 2184 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA