Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ube3c

Gene Name Gene ID Reads Annotation
ube3c ENSDARG00000035978, ENSDARG00000112229 787 ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]










Genes with expression patterns similar to ube3c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ube3c ENSDARG00000035978, ENSDARG00000112229 787 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
2. srp19 ENSDARG00000035699 2624 2.712 0.915 - 0.992 0.805 - - - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
3. sec22a ENSDARG00000078328 1207 2.575 0.846 - 0.990 0.739 - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
4. znf259 znf259 1819 2.553 0.818 - 0.984 - - - - 0.751 -
5. tubgcp2 ENSDARG00000013079 1520 2.476 - - 0.982 - - 0.738 0.756 - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
6. rmi1 ENSDARG00000041376 674 2.455 - - 0.991 - - - 0.743 - 0.721 RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
7. TRIM14 TRIM14 1424 2.432 0.945 - - 0.777 - - 0.710 - -
8. pex16 ENSDARG00000058202 486 2.396 - 0.894 - - - 0.750 - - 0.752 peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
9. arglu1b ENSDARG00000018319 1110 1.946 0.968 - 0.978 - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
10. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.918 0.945 - 0.973 - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
11. NFRKB ENSDARG00000091512 646 1.91 0.923 - 0.987 - - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
12. NUDT8 ENSDARG00000007722 329 1.902 - 0.908 0.994 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
13. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 1.883 0.899 - 0.984 - - - - - - calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
14. nme3 ENSDARG00000100990 3889 1.874 0.912 - 0.962 - - - - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
15. vta1 ENSDARG00000013732 6072 1.867 0.886 - 0.981 - - - - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
16. nin ENSDARG00000060298 1558 1.861 - - 0.983 - - 0.878 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
17. ISCA2 ENSDARG00000038154 489 1.85 - 0.859 0.991 - - - - - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
18. gak ENSDARG00000090654 695 1.825 - - 0.987 - - 0.838 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
19. gna13a ENSDARG00000073765 925 1.823 - 0.836 0.987 - - - - - - guanine nucleotide binding protein (G protein), alpha 13a [Source:ZFIN;Acc:ZDB-GENE-030131-5024]
20. fam135a ENSDARG00000059843 2352 1.819 - - 0.992 0.827 - - - - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
21. thap4 ENSDARG00000077323 434 1.813 0.941 - - - - 0.872 - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
22. znf207a ENSDARG00000015538 2630 1.81 0.844 - 0.966 - - - - - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
23. actr5 ENSDARG00000098235 237 1.809 0.947 - - - - 0.862 - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
24. ppwd1 ENSDARG00000063161 752 1.804 - - 0.972 - - - 0.832 - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-16]
25. wnt6b ENSDARG00000073935 236 1.794 0.875 0.919 - - - - - - - wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
26. chd1l ENSDARG00000015471 1142 1.79 0.877 - 0.913 - - - - - - chromodomain helicase DNA binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-892]
27. atoh1b ENSDARG00000099564 494 1.779 - - 0.977 - - 0.802 - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
28. pycr1 pycr1 1258 1.776 0.952 - - - - 0.824 - - -
29. commd3 ENSDARG00000045402 1601 1.772 - 0.922 - - - 0.850 - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
30. si:ch73-375g18.1 ENSDARG00000075024 2431 1.769 0.795 - 0.974 - - - - - - si:ch73-375g18.1 [Source:ZFIN;Acc:ZDB-GENE-110408-56]
31. thbs3b ENSDARG00000012060 922 1.768 - - 0.993 - - 0.775 - - - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
32. sfxn3 ENSDARG00000057374, ENSDARG00000112320 1766 1.767 0.786 - 0.981 - - - - - - sideroflexin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2092]
33. dedd1 ENSDARG00000002758 932 1.763 - 0.958 - - - 0.805 - - - death effector domain-containing 1 [Source:ZFIN;Acc:ZDB-GENE-000616-2]
34. RNF5 ENSDARG00000075606 1730 1.76 0.954 - - - - 0.806 - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
35. atg10 ENSDARG00000104846 85 1.758 - - - - - 0.859 0.899 - - ATG10 autophagy related 10 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051030-72]
36. rxraa ENSDARG00000057737 750 1.753 - - 0.991 - - - 0.762 - - retinoid X receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-070314-2]
37. wdr35 ENSDARG00000069269 492 1.75 0.948 - - 0.802 - - - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
38. aup1 ENSDARG00000092609 2431 1.748 0.922 0.826 - - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
39. WDFY3 ENSDARG00000078890 2092 1.744 - - 0.966 - - 0.778 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
40. bag1 ENSDARG00000020895 1660 1.744 0.941 0.803 - - - - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
41. TCAIM ENSDARG00000079881 424 1.743 - - 0.992 - - 0.751 - - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
42. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.742 - - 0.918 - - 0.824 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
43. myclb ENSDARG00000034956, ENSDARG00000110185 1466 1.742 - - 0.985 - - - - - 0.757 MYCL proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-5561]
44. six2a ENSDARG00000058004, ENSDARG00000115214 414 1.737 - 0.936 - 0.801 - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
45. ankrd28b ENSDARG00000009023 960 1.736 0.902 0.834 - - - - - - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
46. cops4 ENSDARG00000043732 1508 1.732 - - 0.972 - - 0.760 - - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
47. iah1 ENSDARG00000015765 326 1.725 0.929 - - - - 0.796 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
48. ARHGAP23 ARHGAP23 3946 1.723 - - 0.989 - - 0.734 - - -
49. ercc2 ENSDARG00000021985 678 1.721 - - 0.995 - - 0.726 - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
50. chmp3 ENSDARG00000038064 577 1.72 0.949 - - - - 0.771 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
51. zdhhc9 ENSDARG00000060515 981 1.718 - 0.908 - - - - 0.810 - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
52. CARKD 1398 1.718 0.964 0.754 - - - - - - - carbohydrate kinase domain containing, transcript variant X7
53. mat2al ENSDARG00000063665, ENSDARG00000109637, ENSDARG00000111463 447 1.715 0.849 0.866 - - - - - - - methionine adenosyltransferase II, alpha-like [Source:ZFIN;Acc:ZDB-GENE-060421-5255]
54. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.714 0.950 - - 0.764 - - - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
55. tmed4 ENSDARG00000024954 3476 1.714 - 0.746 0.968 - - - - - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
56. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.711 0.937 - - - - 0.774 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
57. pak4 ENSDARG00000018110 1962 1.71 - - 0.918 0.792 - - - - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
58. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.708 - - 0.982 0.726 - - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
59. ACOT12 ENSDARG00000054534 61 1.707 0.948 - - - - - 0.759 - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
60. glipr2l ENSDARG00000016837 440 1.706 0.869 - - - - 0.837 - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
61. orai2 ENSDARG00000035148 330 1.705 - 0.882 - - - 0.823 - - - ORAI calcium release-activated calcium modulator 2 [Source:ZFIN;Acc:ZDB-GENE-060531-127]
62. wnt7aa ENSDARG00000044827 645 1.704 - 0.865 - 0.839 - - - - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
63. ppifb ENSDARG00000052842 3533 1.698 0.745 - 0.953 - - - - - - peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]
64. ints8 ENSDARG00000057986 1063 1.696 - - 0.982 - - - - 0.714 - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
65. setd8b 2528 1.695 - 0.736 0.959 - - - - - - SET domain containing (lysine methyltransferase) 8b
66. bag6 ENSDARG00000075892 3782 1.693 0.730 - 0.963 - - - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
67. rnf11a ENSDARG00000010442 592 1.692 0.923 - - - - 0.769 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
68. fancd2 ENSDARG00000053574 247 1.69 - 0.875 - - - 0.815 - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
69. znf236 ENSDARG00000095890 410 1.689 - - - 0.856 - - 0.833 - - zinc finger protein 236 [Source:ZFIN;Acc:ZDB-GENE-041111-195]
70. fbrsl1 ENSDARG00000058232 885 1.688 - - - 0.802 - 0.886 - - - fibrosin-like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-487]
71. cib1 ENSDARG00000103118 291 1.686 0.954 - - - - 0.732 - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
72. pknox1.1_1 ENSDARG00000018765 203 1.683 - - - - - 0.872 0.811 - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
73. RBM6 ENSDARG00000077060 3521 1.678 0.843 - - - - 0.835 - - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
74. zgc:110626 ENSDARG00000053159 1124 1.678 0.925 - - - - 0.753 - - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
75. PLEKHM3 ENSDARG00000030633 496 1.677 0.939 - - - - 0.738 - - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
76. hspbp1 ENSDARG00000102937 260 1.672 0.898 - - - - 0.774 - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
77. alad ENSDARG00000100372 1711 1.671 0.845 - - - - 0.826 - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
78. ormdl2 ENSDARG00000058022 1146 1.668 - 0.913 - 0.755 - - - - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
79. ormdl1 ENSDARG00000014333 1589 1.667 0.750 0.917 - - - - - - - ORMDL sphingolipid biosynthesis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030616-529]
80. tmem8a ENSDARG00000032795 677 1.663 - 0.862 - - - 0.801 - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
81. mapk12b ENSDARG00000006409 2246 1.66 - - 0.916 - - 0.744 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
82. eva1ba ENSDARG00000102701 1480 1.658 0.901 0.757 - - - - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
83. chpf2 ENSDARG00000059961 679 1.658 0.947 - - - - 0.711 - - - chondroitin polymerizing factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7797]
84. exoc3l4 ENSDARG00000058180 923 1.657 - 0.843 - - - - 0.814 - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
85. syncripl ENSDARG00000026723 3889 1.657 0.879 - 0.778 - - - - - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
86. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 1.653 0.883 - - 0.770 - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
87. nxf1 ENSDARG00000055076 3251 1.65 - - 0.946 - - 0.704 - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
88. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.648 - - - 0.842 - - 0.806 - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
89. usb1 ENSDARG00000003841 524 1.642 - - - 0.826 - 0.816 - - - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
90. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.638 0.899 - - - - - - - 0.739 SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
91. zgc:109744 ENSDARG00000070800 262 1.636 - 0.907 - - - 0.729 - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
92. mybl2 mybl2 1341 1.634 0.927 - - - - - 0.707 - -
93. thrap3b ENSDARG00000098228 4396 1.633 0.749 - 0.884 - - - - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
94. PKD1 PKD1 260 1.63 - - - - - 0.774 0.856 - -
95. FAM126B 588 1.628 - 0.789 - - - 0.839 - - - family with sequence similarity 126 member B
96. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.628 0.832 - - - - 0.796 - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
97. gga3 ENSDARG00000103667 675 1.619 - 0.867 - - - - - - 0.752 ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
98. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.619 0.882 - - - - 0.737 - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
99. elovl6l ENSDARG00000038639 1184 1.618 0.848 0.770 - - - - - - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
100. kmt2d ENSDARG00000037060 1232 1.617 - - - 0.826 - 0.791 - - - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]

There are 2607 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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