Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sypb

Gene Name Gene ID Reads Annotation
sypb ENSDARG00000002230 262 synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]










Genes with expression patterns similar to sypb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sypb ENSDARG00000002230 262 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
2. snap25b ENSDARG00000058117 469 3.635 0.897 0.947 - - - 0.819 0.972 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
3. tmie ENSDARG00000069423 305 3.587 0.845 0.959 - - - 0.811 0.972 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
4. rusc1 ENSDARG00000078125 617 3.55 0.831 0.867 - - - 0.913 0.939 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
5. gabrg2 ENSDARG00000053665 434 3.441 0.848 0.936 - - - 0.722 0.935 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
6. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.367 0.871 0.736 - - - 0.765 0.995 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
7. ndrg4 ENSDARG00000103937 1234 3.177 0.764 0.734 - - - 0.714 0.965 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
8. dbx2 2971 2.866 0.935 - - - - 0.943 0.988 - - developing brain homeobox 2
9. SPOCK1 ENSDARG00000074644 794 2.833 0.949 - - - - 0.922 0.962 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
10. slc8a2b ENSDARG00000100592 598 2.773 0.873 - - - - 0.906 0.994 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
11. scn8aa ENSDARG00000005775 792 2.755 0.910 - - - - 0.863 0.982 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
12. nbeaa ENSDARG00000070080 862 2.754 0.877 - - - - 0.890 0.987 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
13. elavl4 ENSDARG00000045639 998 2.726 0.803 - - - - 0.967 0.956 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
14. bhlhe22 ENSDARG00000058039 1673 2.724 0.924 - - - - 0.855 0.945 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
15. scn2b ENSDARG00000101713 796 2.719 0.882 - - - - 0.888 0.949 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
16. nefmb ENSDARG00000043697 2052 2.712 0.926 - - - - 0.920 0.866 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
17. dpysl3 ENSDARG00000002587 4381 2.7 0.844 - - - - 0.891 0.965 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
18. syngr3a ENSDARG00000014871 405 2.699 0.859 - - - - 0.908 0.932 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
19. stx1b ENSDARG00000000503 2724 2.698 0.906 - - - - 0.798 0.994 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
20. TUBB8P7_2 TUBB8P7_2 565 2.681 0.913 - - - - 0.825 0.943 - -
21. tuba1c ENSDARG00000055216 8384 2.68 0.909 - - - - 0.792 0.979 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
22. si:ch211-152f6.6 si:ch211-152f6.6 278 2.674 0.904 - - - - 0.851 0.919 - -
23. CABZ01111990.1 CABZ01111990.1 4374 2.673 0.843 - - - - 0.860 0.970 - -
24. GJD2_1 GJD2_1 3045 2.673 0.813 - - - - 0.903 0.957 - -
25. nadl1.1 1200 2.671 0.955 - - - - 0.783 0.933 - - neural adhesion molecule L1.1, transcript variant X1
26. rbfox3 rbfox3 1443 2.671 0.798 - - - - 0.879 0.994 - -
27. pcp4a ENSDARG00000053130 1024 2.67 0.835 0.846 - - - - 0.989 - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
28. her2 ENSDARG00000038205 3219 2.665 0.884 - - - - 0.814 0.967 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
29. epha4b ENSDARG00000011600 3110 2.665 0.862 - - - - 0.862 0.941 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
30. neurog1 ENSDARG00000056130 3924 2.661 0.841 - - - - 0.847 0.973 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
31. cdk5r1b ENSDARG00000045087 2075 2.66 0.829 - - - - 0.875 0.956 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
32. slc1a2b ENSDARG00000102453 3136 2.659 0.872 - - - - 0.806 0.981 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
33. RPH3A RPH3A 309 2.653 0.705 0.958 - - - - 0.990 - -
34. C8H1orf106 C8H1orf106 2690 2.652 0.866 - - - - 0.924 0.862 - -
35. syt4 ENSDARG00000036505 421 2.65 0.922 - - - - 0.818 0.910 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
36. CAMSAP3 ENSDARG00000059475 263 2.65 0.912 - - - - 0.855 0.883 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
37. CR847998.1 ENSDARG00000104784 518 2.645 - 0.889 - - - 0.777 0.979 - -
38. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.645 0.868 - - - - 0.799 0.978 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
39. dnajc5aa ENSDARG00000042948 2885 2.642 0.799 - - - - 0.889 0.954 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
40. evx2 ENSDARG00000059255 317 2.641 0.822 - - - - 0.933 0.886 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
41. pou4f1 ENSDARG00000005559 821 2.641 0.838 - - - - 0.845 0.958 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
42. pcsk1 ENSDARG00000002600 404 2.64 - 0.959 - - - 0.821 0.860 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
43. kcnd1 ENSDARG00000074746 153 2.639 0.836 - - - - 0.910 0.893 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
44. pax6a ENSDARG00000103379 3061 2.639 0.812 - - - - 0.834 0.993 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
45. TUBB8P7_1 TUBB8P7_1 2722 2.63 0.944 - - - - 0.761 0.925 - -
46. gng3 ENSDARG00000009553 2530 2.629 0.819 - - - - 0.843 0.967 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
47. stmn2b ENSDARG00000070537 1586 2.628 0.916 - - - - 0.807 0.905 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
48. APBB3 ENSDARG00000053771 654 2.627 0.855 - - - - 0.826 0.946 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
49. nova2 ENSDARG00000017673 7685 2.622 0.829 - - - - 0.840 0.953 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
50. snap91 ENSDARG00000098809 844 2.618 - 0.927 - - - 0.751 0.940 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
51. nes ENSDARG00000088805 2710 2.617 0.834 - - - - 0.866 0.917 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
52. lhx1a ENSDARG00000014018 958 2.617 0.866 - - - - 0.812 0.939 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
53. AGO1 ENSDARG00000092644 4521 2.611 0.794 - - - - 0.858 0.959 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
54. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.609 0.755 - - - - 0.867 0.987 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
55. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.608 0.867 - - - - 0.907 0.834 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
56. map1aa ENSDARG00000059601 599 2.608 0.829 - - - - 0.933 0.846 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
57. INA INA 950 2.608 0.822 - - - - 0.807 0.979 - -
58. scn1bb ENSDARG00000105003 239 2.606 0.733 - - - - 0.892 0.981 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
59. ppp2r2c ppp2r2c 441 2.601 0.799 - - - - 0.886 0.916 - -
60. rheb ENSDARG00000090213 1432 2.6 0.839 - - - - 0.904 0.857 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
61. clstn1 ENSDARG00000031720 5286 2.597 0.775 - - - - 0.933 0.889 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
62. snap25a ENSDARG00000020609 4537 2.597 0.901 - - - - 0.742 0.954 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
63. cspg5a ENSDARG00000069981 1699 2.597 0.726 - - - - 0.926 0.945 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
64. map7d2a ENSDARG00000068480 513 2.59 0.888 - - - - 0.782 0.920 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
65. necab2 ENSDARG00000056745, ENSDARG00000110976 304 2.589 0.722 - - - - 0.966 0.901 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
66. inab ENSDARG00000053248 3239 2.588 0.935 0.817 - - - 0.836 - - - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
67. gsx1 ENSDARG00000035735 1243 2.584 0.723 - - - - 0.871 0.990 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
68. nell2b ENSDARG00000062797 854 2.583 0.747 - - - - 0.841 0.995 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
69. STMN3 ENSDARG00000038465 1009 2.583 0.840 - - - - 0.750 0.993 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
70. EPB41L1 EPB41L1 1896 2.58 0.775 - - - - 0.831 0.974 - -
71. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.577 0.852 - - - - 0.755 0.970 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
72. kcnc3a ENSDARG00000055855 1821 2.575 0.806 - - - - 0.786 0.983 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
73. clstn3 ENSDARG00000073883 590 2.575 0.710 - - - - 0.877 0.988 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
74. gfap ENSDARG00000025301 5584 2.573 0.876 - - - - 0.709 0.988 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
75. sept5a ENSDARG00000013843 1206 2.568 0.807 0.912 - - - - 0.849 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
76. mllt11 ENSDARG00000071026 2518 2.567 0.949 - - - - 0.721 0.897 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
77. gap43 ENSDARG00000099744 4114 2.567 0.878 - - - - 0.738 0.951 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
78. celf4 ENSDARG00000070045 1537 2.562 0.865 - - - - 0.761 0.936 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
79. dtnbp1b ENSDARG00000055206 64 2.561 0.771 - - - - 0.862 0.928 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
80. rab3ab ENSDARG00000043835 1267 2.554 0.865 - - - - 0.709 0.980 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
81. tmem59l ENSDARG00000003655 1536 2.553 0.894 - - - - 0.803 0.856 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
82. SEMA7A ENSDARG00000078707 465 2.543 - 0.888 - - - 0.719 0.936 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
83. slc18a3a ENSDARG00000006356 1285 2.536 0.771 - - - - 0.790 0.975 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
84. mb21d2a mb21d2a 421 2.536 0.720 - - - - 0.854 0.962 - -
85. Mar-09 Mar-09 126 2.533 0.715 - - - - 0.904 0.914 - -
86. cadm3 ENSDARG00000057013 1545 2.529 0.812 - - - - 0.771 0.946 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
87. zgc:194665 ENSDARG00000004577 136 2.528 0.823 - - - - 0.926 0.779 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
88. atp6v0cb ENSDARG00000036577 3472 2.528 0.845 - - - - 0.713 0.970 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
89. BSN BSN 463 2.525 0.890 - - - - 0.861 0.774 - -
90. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.521 0.891 - - - - 0.720 0.910 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
91. fgf13b ENSDARG00000056633 455 2.52 0.722 - - - - 0.886 0.912 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
92. vgf ENSDARG00000105529 247 2.519 0.706 - - - - 0.889 0.924 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
93. TUSC3 ENSDARG00000078854 1021 2.518 0.725 - - - - 0.868 0.925 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
94. ckbb ENSDARG00000043257 3503 2.518 0.803 - - - - 0.856 0.859 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
95. atp6v0a1b ENSDARG00000015174 1052 2.515 - 0.719 - - - 0.878 0.918 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
96. SYT2 ENSDARG00000014169 265 2.511 0.898 - - - - 0.869 0.744 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
97. EFCC1 ENSDARG00000077826 1359 2.51 0.852 - - - - 0.779 0.879 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
98. GLRA3 ENSDARG00000011066 242 2.508 0.800 - - - - 0.723 0.985 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
99. adam11 ENSDARG00000079204 298 2.507 0.814 - - - - 0.748 0.945 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
100. sox19b ENSDARG00000040266 532 2.507 0.845 - - - - 0.745 0.917 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]

There are 1931 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA