Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sypa

Gene Name Gene ID Reads Annotation
sypa ENSDARG00000042974, ENSDARG00000110528 3217 synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]










Genes with expression patterns similar to sypa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sypa ENSDARG00000042974, ENSDARG00000110528 3217 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
2. stx1b ENSDARG00000000503 2724 4.327 0.950 - - - - 0.937 0.991 0.749 0.700 syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
3. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 4.237 0.811 0.782 - - - 0.968 0.886 0.790 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
4. BX957337.1 BX957337.1 1685 3.687 0.897 - - - - 0.986 0.971 0.833 -
5. pcdh1gc5 ENSDARG00000104826 10052 3.672 0.984 0.744 - - - 0.985 0.959 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
6. slc1a2b ENSDARG00000102453 3136 3.639 0.888 - - - - 0.943 0.973 0.835 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
7. mllt11 ENSDARG00000071026 2518 3.611 0.874 0.856 - - - 0.967 0.914 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
8. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.528 0.934 0.778 - - - 0.829 0.987 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
9. stmn2a ENSDARG00000033234 2272 3.512 0.840 0.740 - - - 0.968 0.964 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
10. nadl1.1 1200 3.485 0.834 - - - - 0.889 0.951 0.811 - neural adhesion molecule L1.1, transcript variant X1
11. dnajc5aa ENSDARG00000042948 2885 3.478 0.863 - - - - 0.825 0.965 0.825 - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
12. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.478 0.874 0.731 - - - 0.896 0.977 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
13. fzd3a ENSDARG00000021664 1958 3.472 0.917 - - - - 0.805 0.891 0.859 - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
14. cadm3 ENSDARG00000057013 1545 3.467 0.751 - - - - 0.981 0.930 0.805 - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
15. atp6v0cb ENSDARG00000036577 3472 3.423 0.800 - - - - 0.926 0.984 - 0.713 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
16. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 3.422 0.854 0.704 - - - 0.912 0.952 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
17. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.419 0.707 0.780 - - - 0.977 0.955 - -
18. slc6a1b ENSDARG00000039647 1301 3.397 0.812 - - - - 0.898 0.839 0.848 - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
19. hmgb3a ENSDARG00000056725 15668 3.388 0.832 - - - - 0.880 0.847 0.829 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
20. tuba2 ENSDARG00000045014 1490 3.381 0.788 - - - - 0.947 0.927 - 0.719 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
21. Sep-03 Sep-03 1124 3.359 0.865 - - - - 0.937 0.848 0.709 -
22. tnika ENSDARG00000056218 728 3.358 0.811 - - - - 0.881 0.865 0.801 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
23. sept5a ENSDARG00000013843 1206 3.331 0.902 0.703 - - - 0.849 0.877 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
24. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 3.285 0.728 - - - - 0.918 0.869 0.770 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
25. aplp1 ENSDARG00000098368 2317 3.239 0.825 - - - - 0.975 - 0.710 0.729 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
26. snap91 ENSDARG00000098809 844 3.199 0.758 0.787 - - - 0.727 0.927 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
27. fyna ENSDARG00000011370 1679 3.179 0.762 0.738 - - - 0.745 0.934 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
28. tuba1c ENSDARG00000055216 8384 2.872 0.922 - - - - 0.967 0.983 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
29. stmn1b ENSDARG00000033655 9491 2.849 0.906 - - - - 0.962 0.981 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
30. si:ch73-21g5.7 ENSDARG00000093156 9412 2.836 0.901 - - - - 0.951 0.984 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
31. slc32a1 ENSDARG00000059775 1092 2.835 0.899 - - - - 0.962 0.974 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
32. slc1a3a ENSDARG00000104431 9888 2.814 0.924 - - - - 0.977 0.913 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
33. snap25a ENSDARG00000020609 4537 2.811 0.897 - - - - 0.964 0.950 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
34. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.805 0.884 - - - - 0.944 0.977 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
35. pcsk1nl ENSDARG00000076170 1232 2.804 0.867 - - - - 0.974 0.963 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
36. gfap ENSDARG00000025301 5584 2.802 0.858 - - - - 0.953 0.991 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
37. plp1a ENSDARG00000103732 3544 2.799 0.889 - - - - 0.946 0.964 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
38. eno2 ENSDARG00000014287 2162 2.797 0.872 - - - - 0.973 0.952 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
39. mapk12b ENSDARG00000006409 2246 2.791 0.840 - - - - 0.958 0.993 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
40. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.788 0.876 - - - - 0.948 0.964 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
41. TUBB8P7_1 TUBB8P7_1 2722 2.788 0.889 - - - - 0.955 0.944 - -
42. necap1 ENSDARG00000020798 612 2.785 0.906 - - - - 0.922 0.957 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
43. TUSC5 TUSC5 1436 2.785 0.865 - - - - 0.961 0.959 - -
44. vgf ENSDARG00000105529 247 2.782 0.942 - - - - 0.898 0.942 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
45. syt11a ENSDARG00000057913 1145 2.782 0.869 - - - - 0.975 0.938 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
46. myt1b ENSDARG00000102879 5411 2.782 0.866 - - - - 0.956 0.960 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
47. gap43 ENSDARG00000099744 4114 2.78 0.866 - - - - 0.958 0.956 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
48. dpysl5a ENSDARG00000011141 1827 2.775 0.845 - - - - 0.939 0.991 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
49. scrt2 ENSDARG00000056175 4331 2.774 0.846 - - - - 0.968 0.960 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
50. rab3ab ENSDARG00000043835 1267 2.773 0.832 - - - - 0.956 0.985 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
51. nova2 ENSDARG00000017673 7685 2.772 0.909 - - - - 0.889 0.974 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
52. ZFHX3 ENSDARG00000103057 7759 2.76 0.908 - - - - 0.911 0.941 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
53. scn8aa ENSDARG00000005775 792 2.759 0.854 - - - - 0.937 0.968 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
54. gabra5 ENSDARG00000070730 156 2.756 0.888 - - - - 0.880 0.988 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
55. mir10d-1 mir10d-1 860 2.748 0.855 - - - - 0.945 0.948 - -
56. spock2 ENSDARG00000075393 791 2.747 0.826 - - - - 0.979 0.942 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
57. amph ENSDARG00000007663 599 2.745 0.855 - - - - 0.909 0.981 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
58. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.743 0.844 - - - - 0.958 0.941 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
59. epha4b ENSDARG00000011600 3110 2.743 0.933 - - - - 0.855 0.955 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
60. ppp3ca ENSDARG00000004988 615 2.734 0.869 - - - - 0.947 0.918 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
61. MAP1A MAP1A 847 2.734 0.830 - - - - 0.961 0.943 - -
62. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.733 0.924 - - - - 0.917 0.892 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
63. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.727 - - - - - 0.987 0.896 0.844 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
64. stmn2b ENSDARG00000070537 1586 2.725 0.884 - - - - 0.958 0.883 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
65. cers6 ENSDARG00000053583 247 2.714 0.822 - - - - 0.947 0.945 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
66. snap25b ENSDARG00000058117 469 2.714 0.887 - - - - 0.860 0.967 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
67. dpysl3 ENSDARG00000002587 4381 2.713 0.869 - - - - 0.873 0.971 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
68. fez1 ENSDARG00000023174 701 2.713 0.853 - - - - 0.946 0.914 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
69. adarb1a ENSDARG00000041609 476 2.712 0.851 - - - - 0.875 0.986 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
70. TUBA1A ENSDARG00000001889 25294 2.71 0.787 - - - - 0.955 0.968 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
71. clstn3 ENSDARG00000073883 590 2.707 0.901 - - - - 0.832 0.974 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
72. cnrip1a ENSDARG00000091683 1491 2.706 0.798 - - - - 0.915 0.993 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
73. sh3gl2 sh3gl2 1305 2.704 0.803 - - - - 0.950 0.951 - -
74. ELOVL4 ELOVL4 3026 2.699 0.954 0.855 - - - - 0.890 - -
75. tubb5 ENSDARG00000037997 18691 2.698 0.930 - - - - - 0.947 0.821 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
76. stmn4l ENSDARG00000043932 654 2.696 0.877 - - - - 0.912 0.907 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
77. AGO1 ENSDARG00000092644 4521 2.695 0.937 - - - - 0.790 0.968 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
78. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.693 0.877 - - - - 0.824 0.992 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
79. zic4 ENSDARG00000031307 1228 2.691 0.903 - - - - 0.963 0.825 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
80. pcsk1 ENSDARG00000002600 404 2.69 0.905 - - - - 0.919 0.866 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
81. kcnc3a ENSDARG00000055855 1821 2.689 0.781 - - - - 0.931 0.977 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
82. slc18a3a ENSDARG00000006356 1285 2.687 0.826 - - - - 0.874 0.987 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
83. lhx5 ENSDARG00000057936 785 2.686 0.766 - - - - 0.973 0.947 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
84. C7H4orf48 C7H4orf48 1455 2.686 0.822 - - - - 0.980 0.884 - -
85. atcaya ENSDARG00000071678 344 2.683 0.861 - - - - 0.876 0.946 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
86. ckbb ENSDARG00000043257 3503 2.682 0.894 - - - - 0.904 0.884 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
87. nrarpb ENSDARG00000018958 6225 2.679 0.774 - - - - 0.937 0.968 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
88. msi1 ENSDARG00000010710 2634 2.679 0.837 - - - - 0.873 0.969 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
89. rtn1b ENSDARG00000021143 1682 2.677 0.824 - - - - 0.964 0.889 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
90. CR847998.1 ENSDARG00000104784 518 2.676 0.832 - - - - 0.869 0.975 - -
91. stxbp1a ENSDARG00000001994 5154 2.676 - - - - - 0.962 0.960 0.754 - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
92. SV2B SV2B 208 2.675 0.805 - - - - 0.944 0.926 - -
93. EFCC1 ENSDARG00000077826 1359 2.675 0.905 - - - - 0.870 0.900 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
94. STMN3 ENSDARG00000038465 1009 2.675 0.798 - - - - 0.884 0.993 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
95. SEMA7A ENSDARG00000078707 465 2.674 0.770 - - - - 0.962 0.942 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
96. nrn1a ENSDARG00000071860 1311 2.673 0.745 - - - - 0.982 0.946 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
97. pax6a ENSDARG00000103379 3061 2.67 0.813 - - - - 0.880 0.977 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
98. slc17a6b ENSDARG00000041150 823 2.668 - - - - - 0.911 0.961 0.796 - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
99. atp1b4 ENSDARG00000053262 1337 2.664 0.845 - - - - 0.965 0.854 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
100. dpysl4 ENSDARG00000103490 534 2.663 0.923 - - - - 0.766 0.974 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]

There are 2213 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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