Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sv2bb

Gene Name Gene ID Reads Annotation
sv2bb ENSDARG00000060711 196 synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]










Genes with expression patterns similar to sv2bb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sv2bb ENSDARG00000060711 196 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
2. gng3 ENSDARG00000009553 2530 3.579 0.890 0.917 - - - 0.778 0.994 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
3. scn2b ENSDARG00000101713 796 3.527 0.846 0.985 - - - 0.726 0.970 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
4. sox19b ENSDARG00000040266 532 3.463 0.828 0.861 - - - 0.857 0.917 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
5. GLRA3 ENSDARG00000011066 242 3.457 0.839 0.887 - - - 0.750 0.981 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
6. nova2 ENSDARG00000017673 7685 3.441 0.773 0.926 - - - 0.771 0.971 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
7. neurog1 ENSDARG00000056130 3924 3.439 0.826 0.823 - - - 0.811 0.979 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
8. si:ch211-152f6.6 si:ch211-152f6.6 278 3.438 0.779 0.912 - - - 0.888 0.859 - -
9. nadl1.1 1200 3.429 0.833 0.890 - - - 0.741 0.965 - - neural adhesion molecule L1.1, transcript variant X1
10. C8H1orf106 C8H1orf106 2690 3.361 0.931 0.761 - - - 0.784 0.885 - -
11. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 3.315 0.881 0.703 - - - 0.840 0.891 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
12. jag1a ENSDARG00000030289 1275 3.311 0.733 0.907 - - - 0.749 0.922 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
13. pax6a ENSDARG00000103379 3061 3.302 0.787 0.843 - - - 0.711 0.961 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
14. ptprnb ENSDARG00000077047 2743 3.283 0.799 0.869 - - - 0.835 0.780 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
15. CHL1 CHL1 1553 3.233 0.737 0.880 - - - 0.716 0.900 - -
16. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.226 0.713 0.741 - - - 0.798 0.974 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
17. myt1b ENSDARG00000102879 5411 3.195 0.716 0.818 - - - 0.701 0.960 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
18. jph3 ENSDARG00000102204 175 3.185 0.770 0.822 - - - 0.737 0.856 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
19. syngr3a ENSDARG00000014871 405 3.172 - 0.743 - - 0.760 0.736 0.933 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
20. mapk11 ENSDARG00000045836 846 3.153 0.912 0.797 - - - 0.740 0.704 - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
21. stmn2b ENSDARG00000070537 1586 3.099 0.741 0.747 - - 0.751 - 0.860 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
22. scrt2 ENSDARG00000056175 4331 2.833 0.935 0.958 - - - - 0.940 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
23. amph ENSDARG00000007663 599 2.797 0.842 0.985 - - - - 0.970 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
24. stx1b ENSDARG00000000503 2724 2.773 0.872 0.913 - - - - 0.988 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
25. dbx2 2971 2.766 0.840 0.936 - - - - 0.990 - - developing brain homeobox 2
26. SV2B SV2B 208 2.764 0.845 0.985 - - - - 0.934 - -
27. stmn2a ENSDARG00000033234 2272 2.756 0.861 0.934 - - - - 0.961 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
28. adam23a ENSDARG00000062323 580 2.755 0.943 0.902 - - - - 0.910 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
29. mir10d-1 mir10d-1 860 2.752 0.892 0.915 - - - - 0.945 - -
30. bhlhe22 ENSDARG00000058039 1673 2.743 0.893 - - - - 0.875 0.975 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
31. SLC5A7 SLC5A7 453 2.734 - 0.880 - - - 0.865 0.989 - -
32. snap25a ENSDARG00000020609 4537 2.726 0.819 0.950 - - - - 0.957 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
33. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.721 0.922 - - - - 0.825 0.974 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
34. APBB3 ENSDARG00000053771 654 2.71 0.846 - - - - 0.883 0.981 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
35. itm2ca ENSDARG00000043448 1265 2.701 - 0.903 - - - 0.821 0.977 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
36. pcsk1nl ENSDARG00000076170 1232 2.69 0.800 0.911 - - - - 0.979 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
37. pcdh1gc5 ENSDARG00000104826 10052 2.684 0.888 0.825 - - - - 0.971 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
38. TUSC5 TUSC5 1436 2.678 0.848 0.891 - - - - 0.939 - -
39. si:ch73-21g5.7 ENSDARG00000093156 9412 2.673 0.777 0.914 - - - - 0.982 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
40. CABZ01029738.1 CABZ01029738.1 327 2.668 - 0.955 - - - 0.824 0.889 - -
41. msi1 ENSDARG00000010710 2634 2.662 0.910 - - - - 0.771 0.981 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
42. syt11a ENSDARG00000057913 1145 2.654 0.806 0.900 - - - - 0.948 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
43. MAP1A MAP1A 847 2.654 0.732 0.980 - - - - 0.942 - -
44. cdk5r2a ENSDARG00000071011 167 2.653 0.927 - - - - 0.826 0.900 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
45. gap43 ENSDARG00000099744 4114 2.644 0.844 0.841 - - - - 0.959 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
46. calca ENSDARG00000056590 150 2.644 - 0.887 - - - 0.786 0.971 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
47. nes ENSDARG00000088805 2710 2.635 0.710 0.977 - - - - 0.948 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
48. AGO1 ENSDARG00000092644 4521 2.634 0.916 - - - - 0.770 0.948 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
49. EPB41L1 EPB41L1 1896 2.627 0.868 - - - - 0.798 0.961 - -
50. slc1a2b ENSDARG00000102453 3136 2.625 0.794 0.878 - - - - 0.953 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
51. sox2 ENSDARG00000070913 2763 2.623 0.764 0.935 - - - - 0.924 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
52. scn8aa ENSDARG00000005775 792 2.619 0.791 0.881 - - - - 0.947 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
53. zic4 ENSDARG00000031307 1228 2.618 0.862 0.879 - - - - 0.877 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
54. mapk12b ENSDARG00000006409 2246 2.617 0.788 0.841 - - - - 0.988 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
55. slc8a2b ENSDARG00000100592 598 2.607 0.857 - - - - 0.760 0.990 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
56. gnao1a ENSDARG00000016676 8184 2.606 0.871 0.757 - - - - 0.978 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
57. NTRK3 NTRK3 163 2.605 0.876 0.822 - - - - 0.907 - -
58. ctnnd2b ENSDARG00000003779 964 2.604 0.732 - - - - 0.907 0.965 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
59. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.602 0.882 0.770 - - - - 0.950 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
60. dla ENSDARG00000010791 9281 2.6 0.839 0.781 - - - - 0.980 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
61. vsnl1a ENSDARG00000023228 1584 2.595 0.820 0.886 - - - - 0.889 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
62. celf4 ENSDARG00000070045 1537 2.593 0.859 - - - - 0.766 0.968 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
63. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.59 0.821 - - - - 0.781 0.988 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
64. UBE2QL1 ENSDARG00000079276 3474 2.589 0.945 - - - - 0.718 0.926 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
65. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.587 - 0.875 - - - 0.785 0.927 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
66. NPAS3 ENSDARG00000109820 362 2.585 0.860 0.822 - - - 0.903 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
67. slc18a3a ENSDARG00000006356 1285 2.583 - 0.867 - - - 0.727 0.989 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
68. nlgn3b ENSDARG00000062376 171 2.57 0.802 - - - - 0.813 0.955 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
69. tnika ENSDARG00000056218 728 2.569 0.946 0.751 - - - - 0.872 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
70. atp2b3b ENSDARG00000023445 1424 2.568 0.793 0.863 - - - - 0.912 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
71. her4.3 ENSDARG00000070770 613 2.567 0.782 - - - - 0.865 0.920 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
72. lhfpl4a ENSDARG00000111810 206 2.562 0.843 - - - - 0.797 0.922 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
73. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.562 0.930 - - - - 0.749 0.883 - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
74. CLIP3 ENSDARG00000054456 734 2.551 0.811 0.808 - - - - 0.932 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
75. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.549 - 0.778 - - - 0.781 0.990 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
76. TUBB8P7_1 TUBB8P7_1 2722 2.547 0.849 0.742 - - - - 0.956 - -
77. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.546 0.912 0.864 - - - - 0.770 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
78. lhx1a ENSDARG00000014018 958 2.539 - 0.903 - - - 0.701 0.935 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
79. CU928222.1 ENSDARG00000097436 1662 2.534 - 0.871 - - - 0.721 0.942 - -
80. nhlh2 ENSDARG00000025495 1860 2.531 - 0.753 - - - 0.817 0.961 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
81. dpysl5a ENSDARG00000011141 1827 2.525 0.836 0.704 - - - - 0.985 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
82. cadm3 ENSDARG00000057013 1545 2.52 0.757 0.841 - - - - 0.922 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
83. rtn1b ENSDARG00000021143 1682 2.516 0.837 0.793 - - - - 0.886 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
84. dbx1a ENSDARG00000086393 3161 2.51 - 0.863 - - - 0.731 0.916 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
85. rbfox3 rbfox3 1443 2.508 0.723 0.816 - - - - 0.969 - -
86. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 2.506 - 0.848 - - - 0.725 0.933 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
87. rnft2 ENSDARG00000053019 270 2.503 0.780 0.913 - - - - 0.810 - - ring finger protein, transmembrane 2 [Source:ZFIN;Acc:ZDB-GENE-050522-168]
88. syt11b ENSDARG00000056105 578 2.502 0.865 0.886 - - - 0.751 - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
89. clstn3 ENSDARG00000073883 590 2.5 0.758 - - - - 0.787 0.955 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
90. SSX2IP SSX2IP 316 2.493 - 0.737 - - - 0.877 0.879 - -
91. cplx2l ENSDARG00000018997 3975 2.485 0.776 0.728 - - - - 0.981 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
92. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 2.484 0.771 0.944 - - - 0.769 - - - homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
93. GADD45G GADD45G 382 2.481 0.793 - - - - 0.740 0.948 - -
94. rheb ENSDARG00000090213 1432 2.477 0.801 - - - - 0.792 0.884 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
95. CABZ01111990.1 CABZ01111990.1 4374 2.477 0.710 - - - - 0.790 0.977 - -
96. CR848045.1 CR848045.1 459 2.474 - 0.731 - - - 0.805 0.938 - -
97. tmem179 ENSDARG00000013292 343 2.473 - 0.912 - - - 0.779 0.782 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
98. ELOVL4 ELOVL4 3026 2.472 0.886 0.718 - - - - 0.868 - -
99. tmem35 ENSDARG00000052567 5685 2.471 0.786 - - - - 0.752 0.933 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
100. atp1a3a ENSDARG00000018259 5393 2.457 0.802 0.876 - - - 0.779 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]

There are 2181 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA