Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for srsf4

Gene Name Gene ID Reads Annotation
srsf4 ENSDARG00000105293 9657 serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]










Genes with expression patterns similar to srsf4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srsf4 ENSDARG00000105293 9657 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
2. MKI67 ENSDARG00000091150 11038 3.951 0.700 - 0.801 0.785 - 0.793 0.872 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
3. cdc25 cdc25 3913 3.938 0.719 0.808 - - - 0.857 0.722 - 0.832
4. h2afva ENSDARG00000068820 16427 3.302 - - 0.812 0.815 - 0.851 0.824 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
5. tmem35 ENSDARG00000052567 5685 3.124 0.721 - - 0.726 0.876 0.801 - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
6. ylpm1 ENSDARG00000043680 7676 3.112 0.713 - - - 0.781 0.807 - - 0.811 YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
7. msi1 ENSDARG00000010710 2634 3.013 0.706 - - 0.710 0.849 0.748 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
8. psmd14 ENSDARG00000063100 15711 2.98 0.743 - 0.769 - 0.709 0.759 - - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
9. nr2f2 ENSDARG00000040926 5213 2.915 0.700 - - 0.737 - 0.748 0.730 - - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
10. vdac1 ENSDARG00000045132 8051 2.509 0.808 - 0.900 - - 0.801 - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
11. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.478 - - - - - 0.852 0.811 - 0.815 TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
12. wu:fb17g07 wu:fb17g07 10567 2.353 0.731 - 0.849 - - 0.773 - - -
13. rufy3 ENSDARG00000029692 3031 2.347 0.752 - - - - 0.763 - - 0.832 RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
14. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.345 - - 0.829 0.742 - - 0.774 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
15. nova2 ENSDARG00000017673 7685 2.345 0.767 - 0.822 - - 0.756 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
16. pl10 pl10 10795 2.342 - 0.784 0.716 - - - 0.842 - -
17. prmt1 ENSDARG00000010246 11311 2.336 0.742 - - - - 0.792 0.802 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
18. dut ENSDARG00000106529 3120 2.327 0.789 0.802 - - - - 0.736 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
19. rrm1 ENSDARG00000014017 7296 2.324 0.759 0.750 - - - - 0.815 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
20. h2afvb ENSDARG00000116491 35692 2.322 0.749 0.856 - - - 0.717 - - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
21. rtca ENSDARG00000002215 3558 2.321 - - - 0.788 - 0.805 0.728 - - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
22. snrpe ENSDARG00000033175 7462 2.316 0.785 - - - - 0.702 0.829 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
23. smarca5 ENSDARG00000052348 15433 2.31 - - - - - 0.824 0.763 0.723 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
24. kif22 ENSDARG00000102624 3694 2.306 - - - - 0.768 0.774 0.764 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
25. tfdp2 ENSDARG00000042835 1985 2.3 - 0.732 - - - 0.735 0.833 - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
26. hnrnpub ENSDARG00000004735 16496 2.286 0.854 - - 0.727 - - 0.705 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
27. smarce1 ENSDARG00000016871 9628 2.284 - - 0.846 - - 0.706 0.732 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
28. ssbp4 ENSDARG00000056483 10196 2.279 0.705 - - - - 0.816 0.758 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
29. lfng ENSDARG00000037879 11783 2.276 0.743 0.739 - - - 0.794 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
30. clta ENSDARG00000045618, ENSDARG00000115484 11767 2.271 - - 0.749 - - 0.812 0.710 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
31. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.27 0.705 - 0.810 - - 0.755 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
32. smarca4 smarca4 9726 2.269 - - - - - 0.774 - 0.720 0.775
33. ptbp1a ENSDARG00000019362 6290 2.267 - 0.733 0.816 - - - 0.718 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
34. psmb7 ENSDARG00000037962 11542 2.252 0.709 0.702 0.841 - - - - - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
35. stmn1a ENSDARG00000004169 21169 2.25 0.720 0.771 - - - - 0.759 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
36. whsc1l1 8544 2.237 - - - 0.716 - 0.786 0.735 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
37. znf865 ENSDARG00000036698 15532 2.214 - 0.715 - - 0.758 0.741 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
38. kdm1a ENSDARG00000060679 6152 2.185 - - - 0.735 0.738 - 0.712 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
39. brd3b ENSDARG00000100129 6387 2.184 - - - - 0.722 0.749 0.713 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
40. hnrpl 6412 1.743 - - - - - 0.906 0.837 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
41. kifc1 ENSDARG00000001558 6658 1.731 - - 0.865 - - 0.866 - - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
42. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.724 - - 0.852 - - 0.872 - - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
43. lbr ENSDARG00000014013 4835 1.696 - - 0.862 - - - 0.834 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
44. CR548630.1 CR548630.1 3301 1.69 - - 0.812 - - 0.878 - - -
45. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.668 - - - - - 0.845 0.823 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
46. h3f3a 66671 1.668 0.830 - - - - - 0.838 - - H3 histone, family 3A, transcript variant X1
47. si:ch211-51e12.7 ENSDARG00000045914 9598 1.652 0.765 - 0.887 - - - - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
48. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.65 - - 0.850 - - - - 0.800 - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
49. akirin2 ENSDARG00000058729 13245 1.647 - - 0.839 - - - 0.808 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
50. carm1 ENSDARG00000018698 5599 1.644 - - - - - 0.915 0.729 - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
51. tuba1c ENSDARG00000055216 8384 1.641 0.765 - 0.876 - - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
52. cenpf ENSDARG00000055133 5267 1.64 - - 0.808 - - - - - 0.832 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
53. HIPK1_1 HIPK1_1 8096 1.639 - - - - - - 0.833 0.806 -
54. cbfa2t2 ENSDARG00000074337 4323 1.638 - - 0.782 - - - - 0.856 - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
55. znf292a ENSDARG00000016763 2253 1.636 - - 0.847 - - 0.789 - - - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
56. ddx39ab ENSDARG00000015111 11619 1.634 - - - - - 0.862 0.772 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
57. fam50a ENSDARG00000024895 3020 1.626 - - 0.794 - - - - - 0.832 family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
58. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.624 0.728 - - - - - 0.896 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
59. yy1a ENSDARG00000042796 4982 1.618 - - 0.801 - - - - 0.817 - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
60. gspt1l ENSDARG00000098627 8381 1.613 - 0.751 0.862 - - - - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
61. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.612 0.743 - - - - - 0.869 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
62. SNRPG ENSDARG00000099667 18697 1.611 - - - 0.787 - - 0.824 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
63. dnaja2l ENSDARG00000010745 2367 1.608 - - - 0.738 - 0.870 - - - DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
64. itm2ba ENSDARG00000007098 5686 1.602 - 0.768 - - 0.834 - - - - integral membrane protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2352]
65. tdg tdg 3269 1.602 - - 0.825 - - - 0.777 - -
66. GUSB ENSDARG00000063126 2712 1.601 - 0.838 0.763 - - - - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
67. eif3m ENSDARG00000013931 8117 1.597 - 0.791 - - 0.806 - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
68. CABZ01043370.1 CABZ01043370.1 2013 1.596 - 0.828 - - - - 0.768 - -
69. IGLON5 ENSDARG00000022176 1353 1.595 - - - - - 0.763 - - 0.832 IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
70. hoxb3a ENSDARG00000029263 5493 1.594 - 0.802 0.792 - - - - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
71. rqcd1 2301 1.592 - - - - - 0.836 0.756 - - RCD1 required for cell differentiation1 homolog (S. pombe)
72. HNRNPAB HNRNPAB 22267 1.592 0.715 - - - - - 0.877 - -
73. gdi1 ENSDARG00000056122 4106 1.592 - - 0.798 - - 0.794 - - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
74. hdac1 ENSDARG00000015427 19804 1.592 0.828 - - - - 0.764 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
75. kidins220b ENSDARG00000017338 1937 1.589 - 0.855 - - - 0.734 - - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
76. wdr82 ENSDARG00000014083 3159 1.588 - 0.787 0.801 - - - - - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
77. sarnp ENSDARG00000059357 4768 1.587 - 0.711 - - - - 0.876 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
78. dbx2 2971 1.586 - - 0.801 - - 0.785 - - - developing brain homeobox 2
79. uba1 ENSDARG00000037559 11579 1.585 - - - - - 0.771 0.814 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
80. wu:fc26g07 wu:fc26g07 1165 1.584 - 0.819 0.765 - - - - - -
81. plp1a ENSDARG00000103732 3544 1.583 0.757 - 0.826 - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
82. CORO1C CORO1C 5554 1.583 0.721 - 0.862 - - - - - -
83. fbxo28 ENSDARG00000027159 9602 1.583 - - 0.861 - - - 0.722 - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
84. ppp2r1a ppp2r1a 11291 1.581 - 0.770 - - - - 0.811 - -
85. trim71 ENSDARG00000075593 2750 1.581 - 0.876 - - - - 0.705 - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
86. CABZ01111990.1 CABZ01111990.1 4374 1.579 0.766 - - - - 0.813 - - -
87. pcdh19 ENSDARG00000034344 2378 1.578 - 0.749 - - - 0.829 - - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
88. cbx3a ENSDARG00000003860 4922 1.578 - - 0.873 - 0.705 - - - - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
89. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.577 - - 0.807 - - - 0.770 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
90. iars ENSDARG00000007955 1363 1.577 - - - - 0.806 - 0.771 - - isoleucyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-6325]
91. cpsf3 ENSDARG00000027649 6897 1.576 - - 0.864 - - - 0.712 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
92. cdca5 ENSDARG00000044437 2041 1.574 0.760 - 0.814 - - - - - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
93. clstn1 ENSDARG00000031720 5286 1.572 0.736 - - - - 0.836 - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
94. LEPROTL1 ENSDARG00000104871 3019 1.572 - - - - - 0.718 0.854 - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
95. FRMD4A ENSDARG00000042249 2883 1.571 - - - - - - 0.739 - 0.832 FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
96. srgap2a srgap2a 7197 1.57 - 0.757 - - - - 0.813 - -
97. NEDD4 NEDD4 2040 1.57 - 0.741 - - - - - - 0.829
98. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.569 - - - - - 0.777 0.792 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
99. khsrp ENSDARG00000026489 15738 1.568 0.725 - - - - - 0.843 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
100. ube2i ube2i 13024 1.567 - - - 0.757 - - 0.810 - -

There are 1626 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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