Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snrpb

Gene Name Gene ID Reads Annotation
snrpb ENSDARG00000011125 11729 small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]










Genes with expression patterns similar to snrpb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrpb ENSDARG00000011125 11729 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
2. lypla2 ENSDARG00000053656 8971 3.806 - - 0.819 0.741 - 0.744 0.801 0.701 - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
3. ube2i ube2i 13024 3.273 0.831 - - 0.760 - - 0.739 0.943 -
4. eif3ba ENSDARG00000059654 22960 3.08 0.721 - 0.847 0.789 - 0.723 - - - eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
5. smarce1 ENSDARG00000016871 9628 2.585 - - - - 0.865 - 0.744 - 0.976 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
6. si:ch211-161h7.4 ENSDARG00000087238 4399 2.561 - - 0.782 - 0.901 - - 0.878 - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
7. ipo7 ENSDARG00000035751 7095 2.508 0.898 - - 0.734 - - 0.876 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
8. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 2.479 - - - - - 0.800 0.758 0.921 - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
9. rbm8a ENSDARG00000016516 8789 2.473 0.830 - - - - - 0.751 0.892 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
10. MKI67 ENSDARG00000091150 11038 2.451 - - - 0.765 0.833 - - 0.853 - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
11. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.446 0.785 - - - - 0.711 - 0.950 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
12. fbl ENSDARG00000053912 5891 2.435 - 0.793 0.745 - 0.897 - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
13. snrpf ENSDARG00000105037 10241 2.431 - - - 0.739 0.889 - 0.803 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
14. pfn2l ENSDARG00000012682 21690 2.428 - - - 0.753 - - 0.720 - 0.955 profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
15. CPEB4 CPEB4 3249 2.419 - - - - 0.809 - 0.742 0.868 -
16. agpat4 ENSDARG00000069044 4487 2.38 0.788 - - - 0.719 - - 0.873 - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
17. rrm1 ENSDARG00000014017 7296 2.378 - - - 0.752 0.828 - - 0.798 - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
18. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.358 0.857 - - 0.776 - - 0.725 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
19. txnrd1 11401 2.306 0.867 - - 0.715 - - 0.724 - - thioredoxin reductase 1
20. cnot6 cnot6 7029 2.274 - 0.790 - - - - 0.766 0.718 -
21. cdv3 ENSDARG00000023028 12380 2.267 0.782 - - - 0.748 - 0.737 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
22. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.264 0.739 0.728 - - - - - 0.797 - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
23. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 2.254 - - - - - 0.822 0.704 0.728 - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
24. acadvl ENSDARG00000016687 5329 2.217 - - 0.724 - - 0.718 0.775 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
25. eef1db ENSDARG00000030053 5185 2.217 - - - - - 0.756 0.742 0.719 - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
26. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 2.193 - - 0.701 - - 0.730 0.762 - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
27. slc1a2b ENSDARG00000102453 3136 1.79 - - - - 0.830 - - 0.960 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
28. myef2 ENSDARG00000059398 6050 1.79 - - - - - - 0.875 0.915 - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
29. lmnb2 ENSDARG00000101624 11304 1.786 0.862 - - - 0.924 - - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
30. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 1.783 0.801 - - - - - - - 0.982 GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
31. ndufa7 ENSDARG00000036684 6051 1.78 - 0.795 - - - - - - 0.985 NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
32. arhgef12b ENSDARG00000100913 1358 1.779 0.816 - - - - - - - 0.963 Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
33. grpel1 ENSDARG00000010021 3055 1.768 - - - - - - 0.850 0.918 - GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]
34. fbxl5 ENSDARG00000043046 1403 1.763 - - - - 0.830 - - 0.933 - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
35. zmiz1a ENSDARG00000074502 3920 1.762 - - - - - - 0.777 - 0.985 zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
36. si:ch1073-286c18.5 ENSDARG00000098567 7391 1.74 - 0.787 - - - - - - 0.953 si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]
37. add1 ENSDARG00000103962 4938 1.736 - - - - - - 0.753 - 0.983 adducin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030909-2]
38. arrb2b ENSDARG00000011545 3126 1.736 - - - - 0.820 - - 0.916 - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
39. CR354611.2 CR354611.2 2040 1.734 - - - - - - 0.800 0.934 -
40. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.728 - - - - 0.924 - 0.804 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
41. farsa ENSDARG00000098825 2813 1.728 0.841 - - - - - - 0.887 - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
42. top2a ENSDARG00000024488 4273 1.726 - - - 0.779 - - - 0.947 - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
43. arih2 ENSDARG00000012848 7087 1.726 - - - - - - 0.799 0.927 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
44. marcksl1b ENSDARG00000035715 37390 1.723 - - - 0.902 - - - 0.821 - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
45. cox14 ENSDARG00000092124 2229 1.72 0.807 - - - - - - 0.913 - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
46. rbm4.2 ENSDARG00000055080 5241 1.72 0.800 - - - - - - 0.920 - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
47. arfrp1 ENSDARG00000057857 2840 1.72 - - - - 0.818 - - 0.902 - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
48. ncalda ENSDARG00000070688 5069 1.715 - - - - - - 0.761 0.954 - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
49. rac1 rac1 7341 1.709 - - - - - - 0.739 - 0.970
50. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 1.709 - - - - - - 0.726 - 0.983 guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
51. cx43.4 ENSDARG00000007099 16369 1.708 - - 0.734 - - - - - 0.974 connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
52. tcea1 ENSDARG00000003531 2912 1.707 - - - - 0.889 - 0.818 - - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
53. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.704 - - - - - 0.811 - 0.893 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
54. ghitm 1443 1.702 - - - - - - 0.778 0.924 - growth hormone inducible transmembrane protein
55. sdc4 ENSDARG00000059906 10105 1.701 - - 0.794 - 0.907 - - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
56. ehd3 ENSDARG00000007869 3238 1.7 - - - - 0.820 - - 0.880 - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
57. oxnad1 ENSDARG00000062664 2684 1.696 - - - - - - 0.714 - 0.982 oxidoreductase NAD-binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-199]
58. arid1ab ENSDARG00000101891 1722 1.691 - - - - 0.887 - 0.804 - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
59. boc ENSDARG00000074335 4832 1.691 - - - - - - 0.820 0.871 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
60. stat5.1 stat5.1 3337 1.691 - - - - - - 0.708 - 0.983
61. taf11 ENSDARG00000037855 2624 1.69 - - - - 0.840 - - 0.850 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
62. brms1la ENSDARG00000006235 2011 1.68 - - - - - - 0.736 0.944 - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
63. hmgb1b ENSDARG00000030479 10398 1.679 - - - - 0.861 - - - 0.818 high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
64. scmh1 ENSDARG00000104311, ENSDARG00000110119 413 1.678 - - - - - - 0.756 0.922 - Scm polycomb group protein homolog 1 [Source:ZFIN;Acc:ZDB-GENE-070410-82]
65. echs1 ENSDARG00000001578 3733 1.677 - - - - - 0.701 - - 0.976 enoyl CoA hydratase, short chain, 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-617]
66. sf3a3 ENSDARG00000100114 4511 1.676 - - - - - 0.707 - - 0.969 splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
67. fzd3a ENSDARG00000021664 1958 1.669 - - - 0.808 - - - 0.861 - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
68. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.661 - - - 0.724 - - - 0.937 - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
69. gpx4b ENSDARG00000076836 8085 1.66 0.891 - - - - - 0.769 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
70. tet2 ENSDARG00000076928 2190 1.66 0.830 - - - - - - 0.830 - tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
71. fubp1 ENSDARG00000029248 15259 1.658 - - - 0.711 0.947 - - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
72. znf706 ENSDARG00000056307 12518 1.657 0.864 0.793 - - - - - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
73. RBM22 ENSDARG00000010238 493 1.654 - - - - 0.858 - 0.796 - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
74. ufm1 ENSDARG00000043857 4152 1.652 - - - - 0.796 - - 0.856 - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
75. tead1a ENSDARG00000028159 3574 1.649 - - - - - - 0.734 0.915 - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
76. c1d ENSDARG00000021112 2839 1.643 - - - - - - 0.726 0.917 - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
77. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.642 0.873 - - - - - 0.769 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
78. ppp6r3 ENSDARG00000013379 2912 1.64 - - - - - - 0.745 0.895 - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
79. atf4b2 atf4b2 4734 1.639 - - - - - - 0.707 0.932 -
80. puf60a ENSDARG00000032175 5618 1.639 - - - 0.820 - - 0.819 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
81. cfl1 ENSDARG00000021124 78399 1.638 0.863 - - - - - 0.775 - - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
82. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.637 - - - - 0.848 - 0.789 - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
83. MTA1 ENSDARG00000007198 731 1.628 - - - - 0.856 - 0.772 - - metastasis associated 1 [Source:ZFIN;Acc:ZDB-GENE-131121-353]
84. nova2 ENSDARG00000017673 7685 1.628 - - - 0.727 0.901 - - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
85. psmb1 ENSDARG00000009640 8628 1.628 0.858 - 0.770 - - - - - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
86. lmnb1 ENSDARG00000044299 9817 1.628 - - 0.804 - 0.824 - - - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
87. dhx9 ENSDARG00000079725 1241 1.625 - - - - 0.858 - 0.767 - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
88. eif3c ENSDARG00000016443 18003 1.624 - - 0.730 - - - - 0.894 - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
89. kif22 ENSDARG00000102624 3694 1.622 - - - - - - 0.745 0.877 - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
90. sf3b14 sf3b14 9434 1.62 - 0.796 - - 0.824 - - - -
91. tnfaip3 ENSDARG00000027777 1066 1.619 - - - - - - 0.719 0.900 - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
92. si:ch211-79l20.4 1305 1.618 - - - - - - 0.777 0.841 - si:ch211-79l20.4, transcript variant X3
93. srsf5a ENSDARG00000029818 15600 1.618 - - - 0.795 0.823 - - - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
94. mccc2 ENSDARG00000017571 5635 1.617 - - 0.756 - - - 0.861 - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
95. atp5o 10343 1.617 0.875 - - - - - - 0.742 - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
96. nucks1b ENSDARG00000012777 4468 1.616 - - - - - - 0.715 0.901 - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
97. ddx39ab ENSDARG00000015111 11619 1.614 - - 0.816 - - - 0.798 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
98. pbx2 ENSDARG00000019717 6892 1.614 - - - - 0.872 - 0.742 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
99. hnrnpk ENSDARG00000018914 8841 1.607 - - 0.788 - - - 0.819 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
100. lrrfip2 ENSDARG00000010400 2633 1.605 - - - - 0.826 - 0.779 - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]

There are 1513 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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