Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:dkeyp-53d3.3

Gene Name Gene ID Reads Annotation
si:dkeyp-53d3.3 ENSDARG00000098664 65 si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]










Genes with expression patterns similar to si:dkeyp-53d3.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkeyp-53d3.3 ENSDARG00000098664 65 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
2. si:dkey-78o7.3 ENSDARG00000100387 59 2.222 0.802 - - 0.712 - 0.708 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
3. lrch4 ENSDARG00000068258 24 2 1.000 1.000 - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
4. si:dkey-150k17.3 33 1.962 1.000 0.962 - - - - - - - si:dkey-150k17.3
5. si:ch211-10j20.7 si:ch211-10j20.7 8 1.904 1.000 - - - - - 0.904 - -
6. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.904 1.000 - - - - - 0.904 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
7. gata4 ENSDARG00000098952 11 1.904 - 1.000 - - - - 0.904 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
8. CU104716.2 CU104716.2 10 1.892 - 0.988 - - - - 0.904 - -
9. dync1i2b ENSDARG00000103195 46 1.888 1.000 0.888 - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
10. disp2 ENSDARG00000042846 53 1.839 0.896 - - - - - 0.943 - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
11. gdf10b ENSDARG00000073891 116 1.831 1.000 - - - - - - - 0.831 growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
12. fbxo32 ENSDARG00000040277 93 1.824 - 0.920 - - - - 0.904 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
13. zgc:114123 ENSDARG00000044956 9 1.807 - 1.000 - - - - - 0.807 - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
14. csdc2b 82 1.769 0.795 0.974 - - - - - - - cold shock domain containing C2, RNA binding b
15. vegfab ENSDARG00000034700 366 1.767 0.791 0.976 - - - - - - - vascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]
16. CSMD1 CSMD1 15 1.767 1.000 - - - - - 0.767 - -
17. im:6904045 ENSDARG00000115174 179 1.762 - 0.937 - - - - 0.825 - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
18. CR388046.3 ENSDARG00000105537 108 1.754 - 0.987 - - - - 0.767 - -
19. megf11 ENSDARG00000062686 230 1.742 - 0.942 - - - - 0.800 - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
20. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1.741 1.000 - - - - - 0.741 - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
21. usp20 ENSDARG00000027501, ENSDARG00000116822 211 1.737 - 0.976 - - - - 0.761 - - ubiquitin specific peptidase 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1219]
22. zgc:173443 ENSDARG00000034403 26 1.735 - - - - - - 0.904 - 0.831 zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
23. ubxn1_1 ENSDARG00000090309 38 1.734 0.849 - - - - - 0.885 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
24. FAM177B 9 1.711 - - - - - - 0.904 0.807 - family with sequence similarity 177 member B
25. kcnt1 ENSDARG00000079484 45 1.71 1.000 - - - - - 0.710 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
26. DIP2B DIP2B 18 1.708 1.000 - - - - 0.708 - - -
27. si:dkey-1h6.8 ENSDARG00000096703 45 1.697 0.771 - - - - - 0.926 - - si:dkey-1h6.8 [Source:ZFIN;Acc:ZDB-GENE-130603-8]
28. FDFT1 ENSDARG00000101062 6 1.692 - 0.984 - - - 0.708 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]
29. zgc:92218 zgc:92218 64 1.687 - 0.963 - - - - 0.724 - -
30. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.677 0.872 - - - - - - - 0.805 A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
31. il11a ENSDARG00000037859 5 1.675 0.771 - - - - - 0.904 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
32. CR478286.1_1 CR478286.1_1 306 1.672 0.765 0.907 - - - - - - -
33. ZNF784_1 ZNF784_1 155 1.663 - 0.927 - - - - - - 0.736
34. cep128 ENSDARG00000103771 75 1.66 0.940 - - - - - 0.720 - - centrosomal protein 128 [Source:ZFIN;Acc:ZDB-GENE-070410-34]
35. myo7aa ENSDARG00000099871 23 1.641 0.927 0.714 - - - - - - - myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
36. igf1 ENSDARG00000094132 59 1.635 0.927 - - - - 0.708 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
37. dock9b ENSDARG00000016311 122 1.631 - 0.806 - - - - - - 0.825 dedicator of cytokinesis 9b [Source:ZFIN;Acc:ZDB-GENE-090916-2]
38. PTGER3 ENSDARG00000055781 187 1.624 0.789 0.835 - - - - - - - prostaglandin E receptor 3 (subtype EP3) [Source:ZFIN;Acc:ZDB-GENE-120508-5]
39. FAM26E FAM26E 79 1.617 - 0.897 - - - - 0.720 - -
40. ZNF337_24 ZNF337_24 16 1.615 0.878 - - - - - - 0.737 -
41. bdkrb1 ENSDARG00000020744 4 1.612 - - - - - 0.708 0.904 - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
42. PCDH10 PCDH10 7 1.612 - - - - - 0.708 0.904 - -
43. zp2.5 ENSDARG00000086522 15 1.612 - - - - - 0.708 0.904 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
44. si:ch211-283l16.1 ENSDARG00000112586 131 1.612 - - - - - 0.708 0.904 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
45. nitr3a_1 ENSDARG00000110676 44 1.612 - - - - - 0.708 0.904 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
46. si:ch211-12e1.5 si:ch211-12e1.5 14 1.612 - - - - - 0.708 0.904 - -
47. PLEKHA2 PLEKHA2 43 1.601 - 0.771 - - - - 0.830 - -
48. nprl3 ENSDARG00000010918 339 1.58 0.786 - - - 0.794 - - - - NPR3-like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-1348]
49. spock2 ENSDARG00000075393 791 1.572 0.835 - - 0.737 - - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
50. C2CD3 ENSDARG00000074137 51 1.569 0.802 - - - - - 0.767 - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
51. si:ch211-71m22.1 ENSDARG00000058638 169 1.559 - 0.799 - - - - 0.760 - - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
52. serpine3 ENSDARG00000057108 49 1.553 - - - - - 0.708 - 0.845 - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
53. cables2b ENSDARG00000017154 131 1.551 - 0.839 - - - - 0.712 - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
54. mctp1b ENSDARG00000060871 20 1.547 - - - - - 0.708 0.839 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
55. neu3.1 ENSDARG00000096382 9 1.535 - - - 0.728 - - - 0.807 - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
56. si:ch211-105d18.7 si:ch211-105d18.7 6 1.529 - - - - - 0.708 0.821 - -
57. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1.526 0.818 - - - - 0.708 - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
58. OVOL1 75 1.523 - 0.773 - - - - - - 0.750 ovo-like zinc finger 1, transcript variant X1
59. EPS8 78 1.522 - 0.816 - - - - 0.706 - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
60. caspbl ENSDARG00000094433 1 1.515 - - - - - 0.708 - 0.807 - caspase b, like [Source:ZFIN;Acc:ZDB-GENE-090311-53]
61. si:dkey-111b14.2 si:dkey-111b14.2 25 1.515 - - - - - 0.708 - 0.807 -
62. mir124-6 64 1.51 0.802 - - - - 0.708 - - - microRNA 124-6
63. chtopb ENSDARG00000070430 29 1.497 - - - 0.709 - - - - 0.788 chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
64. aptx ENSDARG00000027143 87 1.497 - - - 0.789 - 0.708 - - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
65. sod3b ENSDARG00000079183 39 1.496 - - - - - - 0.771 - 0.725 superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
66. SHISA8 SHISA8 58 1.493 - - - 0.713 - - - - 0.780
67. TMEM240 TMEM240 13 1.484 - - - 0.776 - 0.708 - - -
68. zgc:171759_2 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 48 1.476 - 0.768 - - - 0.708 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
69. wdr65 wdr65 251 1.473 - 0.765 - - - 0.708 - - -
70. si:dkey-253d23.9 ENSDARG00000074820 24 1.469 - 0.761 - - - 0.708 - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
71. nab2 ENSDARG00000078076 108 1.461 - - - - - 0.708 0.753 - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
72. brf1a ENSDARG00000017835 206 1.426 - 0.711 - - - - - - 0.715 BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
73. rxfp1 ENSDARG00000090071 6 1.419 - - - - - 0.708 - 0.711 - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
74. bbs5 ENSDARG00000039827 211 1.417 - - - - - 0.708 - - 0.709 Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
75. MYO9B ENSDARG00000078313 97 1.414 - 0.706 - - - 0.708 - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
76. si:ch73-57f22.2 ENSDARG00000087453 28 1 1.000 - - - - - - - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
77. elovl4a ENSDARG00000006773 412 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
78. BX324155.2 BX324155.2 1 1 1.000 - - - - - - - -
79. BX005421.4 BX005421.4 11 1 - 1.000 - - - - - - -
80. FUT9 FUT9 91 1 1.000 - - - - - - - -
81. zgc:174694 zgc:174694 2 1 1.000 - - - - - - - -
82. CABZ01021433.1 ENSDARG00000105696 74 1 1.000 - - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
83. slc8a1a ENSDARG00000013422 12 1 - 1.000 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-1]
84. CABZ01059406.1 ENSDARG00000088775 1 1 1.000 - - - - - - - -
85. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
86. lppr5b lppr5b 23 1 1.000 - - - - - - - -
87. si:dkey-266f7.10 ENSDARG00000086613 7 1 1.000 - - - - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
88. MAST1 MAST1 29 1 1.000 - - - - - - - -
89. si:dkey-185p13.1 ENSDARG00000095837 12 1 - 1.000 - - - - - - - si:dkey-185p13.1 [Source:ZFIN;Acc:ZDB-GENE-110411-125]
90. si:dkey-49n23.3 ENSDARG00000095325 4 1 1.000 - - - - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
91. npffr2.1 npffr2.1 60 1 1.000 - - - - - - - -
92. prdm11 ENSDARG00000074468 2 1 1.000 - - - - - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
93. si:ch73-29c22.1 ENSDARG00000090948 5 1 1.000 - - - - - - - - si:ch73-29c22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-309]
94. zgc:113307 ENSDARG00000044894 17 1 1.000 - - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
95. si:ch211-113a14.26_1 5 1 1.000 - - - - - - - - si:ch211-113a14.26
96. LRFN2_1 LRFN2_1 17 1 1.000 - - - - - - - -
97. BX548021.2 BX548021.2 4 1 1.000 - - - - - - - -
98. FAXC FAXC 102 1 1.000 - - - - - - - -
99. UBAC2 ENSDARG00000093065, ENSDARG00000116281, ENSDARG00000116596 16 1 1.000 - - - - - - - - UBA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-2122]
100. yod1 ENSDARG00000008542 56 1 1.000 - - - - - - - - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]

There are 1604 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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