Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-9i5.1

Gene Name Gene ID Reads Annotation
si:dkey-9i5.1 si:dkey-9i5.1 36










Genes with expression patterns similar to si:dkey-9i5.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-9i5.1 si:dkey-9i5.1 36 6 - 1.000 - - 1.000 1.000 1.000 1.000 1.000
2. si:dkey-53f14.2 si:dkey-53f14.2 4 2.955 - - - - 0.955 1.000 1.000 - -
3. myo16 ENSDARG00000078582 714 2.412 - 0.752 - - - - 0.721 0.939 - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
4. SYNPO 2 2 - - - - 1.000 - - - 1.000 synaptopodin, transcript variant X2
5. il7r ENSDARG00000078970 4 2 - - - - 1.000 - 1.000 - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
6. BTBD17 BTBD17 53 2 - - - - - 1.000 1.000 - -
7. SSTR2 SSTR2 12 2 - - - - 1.000 - - - 1.000
8. si:ch1073-351l9.1 si:ch1073-351l9.1 1 2 - - - - 1.000 - - - 1.000
9. wdr27 ENSDARG00000053386 2 2 - - - - 1.000 - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
10. sftpbb ENSDARG00000067566 13 2 - - - - 1.000 - 1.000 - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
11. KIAA0319 KIAA0319 2 2 - - - - - 1.000 - - 1.000
12. CR936540.2 CR936540.2 4 2 - - - - - 1.000 1.000 - -
13. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 2 - - - - 1.000 - 1.000 - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
14. CABZ01056274.1 CABZ01056274.1 3 2 - - - - - 1.000 - - 1.000
15. si:dkey-276l13.5 si:dkey-276l13.5 3 2 - - - - 1.000 - - - 1.000
16. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 2 - - - - - - 1.000 - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
17. CR848025.1 ENSDARG00000100501 35 1.999 - - - - - - 1.000 0.999 - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
18. si:dkey-242e21.3 ENSDARG00000075723 77 1.999 - - - - - 1.000 - 0.999 - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
19. nmu ENSDARG00000043299 67 1.994 - - - - - - 1.000 0.994 - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
20. myh6 ENSDARG00000090637 66 1.994 - - - - 0.994 1.000 - - - myosin, heavy chain 6, cardiac muscle, alpha [Source:ZFIN;Acc:ZDB-GENE-031112-1]
21. BX936298.1 ENSDARG00000092607 2 1.909 - - - - 0.909 - 1.000 - -
22. CABZ01067743.1 CABZ01067743.1 48 1.898 - 0.898 - - - - 1.000 - -
23. FP102801.1_1 FP102801.1_1 238 1.884 - - - - - - 0.892 0.992 -
24. si:zfos-979f1.2 ENSDARG00000011652 24 1.877 - - - - - 0.877 - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
25. CU184872.1 CU184872.1 15 1.877 - - - - - 0.877 1.000 - -
26. pde8a ENSDARG00000087941 11 1.877 - - - - 0.877 - 1.000 - - phosphodiesterase 8A [Source:ZFIN;Acc:ZDB-GENE-070112-622]
27. GPT GPT 2 1.877 - - - - 0.877 - - - 1.000
28. sparcl1 ENSDARG00000074989 80 1.856 - - - - 0.856 1.000 - - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
29. ROBO3_1 ROBO3_1 468 1.824 - - - - - - 0.834 0.990 -
30. cryba1l2 ENSDARG00000014803 47 1.82 - - - - 0.820 1.000 - - - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
31. phf20a ENSDARG00000002750 90 1.817 - - - - 0.817 - 1.000 - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
32. rgs20 ENSDARG00000038859 331 1.8 - - - - - - 0.849 0.951 - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
33. asb16 ENSDARG00000056468, ENSDARG00000110292 126 1.774 - 0.780 - - - - - 0.994 - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
34. si:dkey-250k10.3 si:dkey-250k10.3 2 1.772 - 0.772 - - 1.000 - - - -
35. crhbp ENSDARG00000024831 63 1.772 - 0.772 - - - 1.000 - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
36. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1.772 - 0.772 - - - - 1.000 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
37. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1.766 - 0.772 - - - - - 0.994 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
38. si:dkey-122c11.4 si:dkey-122c11.4 13 1.761 - - - - - - 1.000 - 0.761
39. wbp2nl ENSDARG00000044852 14 1.755 - 0.755 - - - - 1.000 - - WBP2 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-4012]
40. WSCD1 ENSDARG00000098113 35 1.748 - - - - - 1.000 0.748 - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
41. kcnk9 ENSDARG00000104563 92 1.733 - - - - - - 0.743 0.990 - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
42. CR318624.1 ENSDARG00000094618 5 1.728 - - - - 0.728 - - - 1.000
43. C9H2orf69 C9H2orf69 148 1.715 - 0.731 - - - - - 0.984 -
44. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.714 - - - - - 0.725 - 0.989 - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
45. HIST1H4J_4 HIST1H4J_4 9 1.712 - - - - - - 1.000 - 0.712
46. si:ch211-214b16.4 ENSDARG00000074345 261 1.711 - 0.737 - - - - - 0.974 - si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]
47. trim46b ENSDARG00000058649 54 1.691 - - - - - 0.877 0.814 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
48. calca ENSDARG00000056590 150 1.685 - - - - - - 0.709 0.976 - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
49. si:dkeyp-27e10.3 ENSDARG00000063008 369 1.668 - 0.754 - - - - 0.914 - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
50. dscamb ENSDARG00000028118 82 1.661 - 0.898 - - - - 0.763 - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
51. st6galnac5a ENSDARG00000039220 76 1.659 - 0.710 - - - - 0.949 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
52. NELL2A ENSDARG00000090690 840 1.652 - 0.772 - - - - 0.880 - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
53. exosc4 ENSDARG00000103432 21 1.649 - 0.772 - - - 0.877 - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
54. bicc1b ENSDARG00000070497 406 1.63 - 0.716 - - - - - 0.914 - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
55. rab6bb ENSDARG00000031343 1381 1.618 - - - - - - 0.819 0.799 - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
56. si:dkey-238f9.1 ENSDARG00000079446 51 1.616 - 0.772 - - - - 0.844 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
57. vav3b ENSDARG00000073713, ENSDARG00000075962 26 1.609 - 0.881 - - 0.728 - - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
58. HSPA4L ENSDARG00000053544 363 1.586 - 0.773 - - - - 0.813 - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
59. pou4f1 ENSDARG00000005559 821 1.577 - - - - - - 0.787 0.790 - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
60. pax6l pax6l 54 1.57 - - - - - 0.713 - - 0.857
61. fgf6a ENSDARG00000009351 799 1.559 - 0.737 - - - - - 0.822 - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
62. ENTHD1 ENTHD1 235 1.55 - - - - - 0.765 - 0.785 -
63. scn8aa ENSDARG00000005775 792 1.548 - - - - - - 0.848 0.700 - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
64. elovl4a ENSDARG00000006773 412 1.541 - 0.834 - - - - 0.707 - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
65. BX571712.3 ENSDARG00000098050 1 1.527 - 0.772 - - 0.755 - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
66. CABZ01071911.2 CABZ01071911.2 64 1.513 - 0.791 - - - 0.722 - - -
67. rrad ENSDARG00000052011, ENSDARG00000112434 70 1.479 - 0.755 - - - 0.724 - - - Ras-related associated with diabetes [Source:ZFIN;Acc:ZDB-GENE-030131-5607]
68. chst3a ENSDARG00000061070 127 1.475 - - - - - 0.716 0.759 - - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
69. b3gat1 b3gat1 77 1.474 - 0.772 - - - - 0.702 - -
70. rpph1 33 1.457 - 0.755 - - - 0.702 - - - ribonuclease P RNA component H1
71. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
72. im:7160594 ENSDARG00000070957 1 1 - - - - - - 1.000 - - im:7160594 [Source:ZFIN;Acc:ZDB-GENE-080917-43]
73. abcd1 ENSDARG00000074876 6 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
74. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
75. CR936977.1 ENSDARG00000100144 4 1 - - - - - 1.000 - - -
76. pcdh1a6 ENSDARG00000097170 6 1 - - - - - - 1.000 - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
77. elmod1 ENSDARG00000062056, ENSDARG00000113222 10 1 - - - - - - 1.000 - - ELMO/CED-12 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070112-262]
78. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
79. si:dkey-82i20.3 si:dkey-82i20.3 6 1 - - - - - - - - 1.000
80. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - 1.000 - - - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
81. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
82. si:ch73-366i20.25 si:ch73-366i20.25 6 1 - - - - - - 1.000 - -
83. CU571169.4 CU571169.4 12 1 - - - - - - 1.000 - -
84. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
85. BX119910.12 BX119910.12 1 1 - - - - - - 1.000 - -
86. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - - - - 1.000 - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
87. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
88. adgra1a ENSDARG00000054177 19 1 - - - - - - 1.000 - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
89. fgf18b ENSDARG00000043962, ENSDARG00000112937 29 1 - - - - - - 1.000 - - fibroblast growth factor 18b [Source:ZFIN;Acc:ZDB-GENE-050221-4]
90. cacna1i ENSDARG00000070522 1 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, T type, alpha 1I subunit [Source:ZFIN;Acc:ZDB-GENE-060503-324]
91. rbbp9 ENSDARG00000040713 12 1 - - - - - 1.000 - - - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
92. KCNMB3 KCNMB3 5 1 - - - - 1.000 - - - -
93. nrg2b ENSDARG00000086585 100 1 - - - - - - 1.000 - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
94. si:ch211-218m3.16 ENSDARG00000044336 33 1 - - - - - - - 1.000 - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
95. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
96. si:dkey-189d19.2 si:dkey-189d19.2 45 1 - - - - - - 1.000 - -
97. si:dkey-154p10.3 ENSDARG00000068366 153 1 - - - - - - 1.000 - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
98. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1 - - - - - - 1.000 - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
99. zgc:162872 ENSDARG00000012184 1 1 - - - - 1.000 - - - - zgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]
100. si:ch211-170d8.5 ENSDARG00000046142 0 1 - - - - - - - - 1.000 si:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]

There are 1818 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA