Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-9i5.1

Gene Name Gene ID Reads Annotation
si:dkey-9i5.1 si:dkey-9i5.1 36










Genes with expression patterns similar to si:dkey-9i5.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-9i5.1 si:dkey-9i5.1 36 6 - 1.000 - - 1.000 1.000 1.000 1.000 1.000
2. si:dkey-53f14.2 si:dkey-53f14.2 4 2.955 - - - - 0.955 1.000 1.000 - -
3. myo16 ENSDARG00000078582 714 2.412 - 0.752 - - - - 0.721 0.939 - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
4. sftpbb ENSDARG00000067566 13 2 - - - - 1.000 - 1.000 - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
5. wdr27 ENSDARG00000053386 2 2 - - - - 1.000 - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
6. si:ch1073-351l9.1 si:ch1073-351l9.1 1 2 - - - - 1.000 - - - 1.000
7. SSTR2 SSTR2 12 2 - - - - 1.000 - - - 1.000
8. BTBD17 BTBD17 53 2 - - - - - 1.000 1.000 - -
9. il7r ENSDARG00000078970 4 2 - - - - 1.000 - 1.000 - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
10. SYNPO 2 2 - - - - 1.000 - - - 1.000 synaptopodin, transcript variant X2
11. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 2 - - - - - - 1.000 - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
12. si:dkey-276l13.5 si:dkey-276l13.5 3 2 - - - - 1.000 - - - 1.000
13. CABZ01056274.1 CABZ01056274.1 3 2 - - - - - 1.000 - - 1.000
14. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 2 - - - - 1.000 - 1.000 - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
15. CR936540.2 CR936540.2 4 2 - - - - - 1.000 1.000 - -
16. KIAA0319 KIAA0319 2 2 - - - - - 1.000 - - 1.000
17. CR848025.1 ENSDARG00000100501 35 1.999 - - - - - - 1.000 0.999 - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
18. si:dkey-242e21.3 ENSDARG00000075723 77 1.999 - - - - - 1.000 - 0.999 - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
19. nmu ENSDARG00000043299 67 1.994 - - - - - - 1.000 0.994 - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
20. myh6 ENSDARG00000090637 66 1.994 - - - - 0.994 1.000 - - - myosin, heavy chain 6, cardiac muscle, alpha [Source:ZFIN;Acc:ZDB-GENE-031112-1]
21. BX936298.1 ENSDARG00000092607 2 1.909 - - - - 0.909 - 1.000 - -
22. CABZ01067743.1 CABZ01067743.1 48 1.898 - 0.898 - - - - 1.000 - -
23. FP102801.1_1 FP102801.1_1 238 1.884 - - - - - - 0.892 0.992 -
24. CU184872.1 CU184872.1 15 1.877 - - - - - 0.877 1.000 - -
25. si:zfos-979f1.2 ENSDARG00000011652 24 1.877 - - - - - 0.877 - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
26. GPT GPT 2 1.877 - - - - 0.877 - - - 1.000
27. pde8a ENSDARG00000087941 11 1.877 - - - - 0.877 - 1.000 - - phosphodiesterase 8A [Source:ZFIN;Acc:ZDB-GENE-070112-622]
28. sparcl1 ENSDARG00000074989 80 1.856 - - - - 0.856 1.000 - - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
29. ROBO3_1 ROBO3_1 468 1.824 - - - - - - 0.834 0.990 -
30. cryba1l2 ENSDARG00000014803 47 1.82 - - - - 0.820 1.000 - - - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
31. phf20a ENSDARG00000002750 90 1.817 - - - - 0.817 - 1.000 - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
32. rgs20 ENSDARG00000038859 331 1.8 - - - - - - 0.849 0.951 - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
33. asb16 ENSDARG00000056468, ENSDARG00000110292 126 1.774 - 0.780 - - - - - 0.994 - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
34. si:dkey-250k10.3 si:dkey-250k10.3 2 1.772 - 0.772 - - 1.000 - - - -
35. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1.772 - 0.772 - - - - 1.000 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
36. crhbp ENSDARG00000024831 63 1.772 - 0.772 - - - 1.000 - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
37. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1.766 - 0.772 - - - - - 0.994 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
38. si:dkey-122c11.4 si:dkey-122c11.4 13 1.761 - - - - - - 1.000 - 0.761
39. wbp2nl ENSDARG00000044852 14 1.755 - 0.755 - - - - 1.000 - - WBP2 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-4012]
40. WSCD1 ENSDARG00000098113 35 1.748 - - - - - 1.000 0.748 - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
41. kcnk9 ENSDARG00000104563 92 1.733 - - - - - - 0.743 0.990 - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
42. CR318624.1 ENSDARG00000094618 5 1.728 - - - - 0.728 - - - 1.000
43. C9H2orf69 C9H2orf69 148 1.715 - 0.731 - - - - - 0.984 -
44. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.714 - - - - - 0.725 - 0.989 - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
45. HIST1H4J_4 HIST1H4J_4 9 1.712 - - - - - - 1.000 - 0.712
46. si:ch211-214b16.4 ENSDARG00000074345 261 1.711 - 0.737 - - - - - 0.974 - si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]
47. trim46b ENSDARG00000058649 54 1.691 - - - - - 0.877 0.814 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
48. calca ENSDARG00000056590 150 1.685 - - - - - - 0.709 0.976 - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
49. si:dkeyp-27e10.3 ENSDARG00000063008 369 1.668 - 0.754 - - - - 0.914 - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
50. dscamb ENSDARG00000028118 82 1.661 - 0.898 - - - - 0.763 - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
51. st6galnac5a ENSDARG00000039220 76 1.659 - 0.710 - - - - 0.949 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
52. NELL2A ENSDARG00000090690 840 1.652 - 0.772 - - - - 0.880 - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
53. exosc4 ENSDARG00000103432 21 1.649 - 0.772 - - - 0.877 - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
54. bicc1b ENSDARG00000070497 406 1.63 - 0.716 - - - - - 0.914 - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
55. rab6bb ENSDARG00000031343 1381 1.618 - - - - - - 0.819 0.799 - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
56. si:dkey-238f9.1 ENSDARG00000079446 51 1.616 - 0.772 - - - - 0.844 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
57. vav3b ENSDARG00000073713, ENSDARG00000075962 26 1.609 - 0.881 - - 0.728 - - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
58. HSPA4L ENSDARG00000053544 363 1.586 - 0.773 - - - - 0.813 - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
59. pou4f1 ENSDARG00000005559 821 1.577 - - - - - - 0.787 0.790 - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
60. pax6l pax6l 54 1.57 - - - - - 0.713 - - 0.857
61. fgf6a ENSDARG00000009351 799 1.559 - 0.737 - - - - - 0.822 - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
62. ENTHD1 ENTHD1 235 1.55 - - - - - 0.765 - 0.785 -
63. scn8aa ENSDARG00000005775 792 1.548 - - - - - - 0.848 0.700 - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
64. elovl4a ENSDARG00000006773 412 1.541 - 0.834 - - - - 0.707 - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
65. BX571712.3 ENSDARG00000098050 1 1.527 - 0.772 - - 0.755 - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
66. CABZ01071911.2 CABZ01071911.2 64 1.513 - 0.791 - - - 0.722 - - -
67. rrad ENSDARG00000052011, ENSDARG00000112434 70 1.479 - 0.755 - - - 0.724 - - - Ras-related associated with diabetes [Source:ZFIN;Acc:ZDB-GENE-030131-5607]
68. chst3a ENSDARG00000061070 127 1.475 - - - - - 0.716 0.759 - - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
69. b3gat1 b3gat1 77 1.474 - 0.772 - - - - 0.702 - -
70. rpph1 33 1.457 - 0.755 - - - 0.702 - - - ribonuclease P RNA component H1
71. cldnd ENSDARG00000006580 17 1 - - - - - - 1.000 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
72. nebl ENSDARG00000021200 40 1 - - - - - - 1.000 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
73. si:dkey-211f1.2 si:dkey-211f1.2 11 1 - - - - - - 1.000 - -
74. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - 1.000 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
75. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - - - 1.000 - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
76. asap3 ENSDARG00000021896 19 1 - - - - - - 1.000 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
77. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - - - - 1.000
78. ssh1b ENSDARG00000010031 4 1 - - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
79. atp8b2 ENSDARG00000099216 21 1 - - - - - - 1.000 - - ATPase phospholipid transporting 8B2 [Source:ZFIN;Acc:ZDB-GENE-030131-2474]
80. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
81. smarcd3b ENSDARG00000019969 11 1 - - - - - 1.000 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
82. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
83. pde5ab ENSDARG00000051915 18 1 - - - - - 1.000 - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
84. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
85. grm1a ENSDARG00000026796 9 1 - - - - - - 1.000 - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
86. nptx2b ENSDARG00000045164 5 1 - - - - - - 1.000 - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
87. PSMB11_1 PSMB11_1 2 1 - - - - - 1.000 - - -
88. TDRD6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
89. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 - - - - 1.000 - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
90. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
91. gad1a ENSDARG00000093411 2 1 - - - - - 1.000 - - - glutamate decarboxylase 1a [Source:ZFIN;Acc:ZDB-GENE-070912-472]
92. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
93. ttc25 ENSDARG00000058140 2 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
94. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
95. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1 - - - - 1.000 - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
96. fbxl3b ENSDARG00000021882 58 1 - - - - - - 1.000 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
97. grin2cb ENSDARG00000077560 9 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
98. GGT5 GGT5 1 1 - - - - - - - - 1.000
99. CHCHD5 ENSDARG00000091754 35 1 - 1.000 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
100. PCDH10_1 PCDH10_1 57 1 - - - - - - 1.000 - -

There are 1818 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA