Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-25o16.2

Gene Name Gene ID Reads Annotation
si:dkey-25o16.2 1990 si:dkey-25o16.2, transcript variant X1










Genes with expression patterns similar to si:dkey-25o16.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-25o16.2 1990 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-25o16.2, transcript variant X1
2. si:busm1-118j2.5 si:busm1-118j2.5 10462 5.079 - 0.893 0.929 0.705 - - 0.972 0.846 0.734
3. slc4a1a ENSDARG00000012881 8972 4.215 - 0.830 0.920 - - - 0.957 0.711 0.797 solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
4. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 4.178 - 0.829 0.760 - 0.878 - - 0.813 0.898 hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
5. epb41b ENSDARG00000029019 1472 3.478 - 0.788 0.883 - - - 0.934 - 0.873 erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
6. cahz ENSDARG00000011166 5771 3.451 - 0.774 0.877 - - - 0.970 - 0.830 carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
7. klfd klfd 625 3.374 - 0.819 0.880 - - - 0.849 - 0.826
8. HBQ1 HBQ1 413 3.196 - 0.746 0.882 - - - 0.833 0.735 -
9. epor_1 ENSDARG00000090834 366 3.149 - 0.775 - - - - 0.851 0.748 0.775 erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
10. hbae1 14666 2.613 - 0.790 0.842 - - - 0.981 - - hemoglobin, alpha embryonic 1
11. AL935210.1 ENSDARG00000088330 24618 2.581 - - 0.815 - - - 0.975 - 0.791 hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
12. hbae1_1 37308 2.55 - 0.892 0.889 - - - - - 0.769 hemoglobin, alpha embryonic 1
13. gata1a ENSDARG00000013477, ENSDARG00000117116 902 2.544 - - 0.832 - - - 0.882 - 0.830 GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
14. nt5c2l1 ENSDARG00000034852 1014 2.539 - 0.901 - - - - 0.870 - 0.768 5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]
15. hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 2.517 - 0.846 0.890 - - - - 0.781 - hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
16. hmbsb ENSDARG00000055991 3037 2.504 - 0.835 0.849 - - - - - 0.820 hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
17. hbbe1.1 ENSDARG00000113599 64815 2.502 - 0.815 - - - - - 0.844 0.843 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
18. nmt1b ENSDARG00000057206 654 2.404 - 0.826 - - - 0.748 0.830 - - N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
19. hbbe1.1_1 ENSDARG00000113599 31704 2.298 - - 0.772 - - - 0.709 0.817 - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
20. hbae3 ENSDARG00000079305 100050 2.27 - 0.718 0.749 - - - - - 0.803 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
21. CASKIN2_1 CASKIN2_1 2299 1.804 - 0.872 - - 0.932 - - - -
22. sepsecs ENSDARG00000033861 478 1.789 - - - - 0.951 0.838 - - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:ZFIN;Acc:ZDB-GENE-040426-859]
23. mrpl27 ENSDARG00000032985 2158 1.785 - 0.856 - - 0.929 - - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
24. si:ch211-214p16.1 ENSDARG00000044129 64 1.758 - - - - - 0.864 0.894 - - si:ch211-214p16.1 [Source:NCBI gene;Acc:368901]
25. ddx49 ENSDARG00000012899 1604 1.746 - 0.815 - - 0.931 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
26. hbz 327 1.723 - 0.826 - - - - 0.897 - - hemoglobin subunit zeta
27. cdkn2aipnl ENSDARG00000053395 5107 1.714 - 0.809 - - 0.905 - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
28. BX294434.1 ENSDARG00000061272 6493 1.702 - 0.769 - - 0.933 - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
29. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.7 - 0.842 - - - 0.858 - - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
30. utp3 ENSDARG00000056720 922 1.686 - 0.736 - - 0.950 - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
31. fbxl22 ENSDARG00000096995 1290 1.652 - 0.803 - - - - 0.849 - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
32. CABZ01074946.1 CABZ01074946.1 119 1.649 - 0.749 - - - - 0.900 - -
33. hspg2 ENSDARG00000076564 3440 1.646 - 0.753 - - 0.893 - - - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
34. PACS1 PACS1 2061 1.64 - 0.700 - - 0.940 - - - -
35. mrpl12 ENSDARG00000038768 5539 1.636 - 0.793 - - 0.843 - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
36. CBFA2T3 ENSDARG00000079012 6799 1.617 - 0.853 - - 0.764 - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
37. eif2s3 ENSDARG00000008292 17051 1.607 - 0.867 - - 0.740 - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
38. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.603 - 0.753 - - 0.850 - - - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
39. mir133b_1 671 1.601 - 0.807 - - - - 0.794 - - microRNA 133b
40. urod ENSDARG00000006818 856 1.596 - 0.819 0.777 - - - - - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
41. pdss1 ENSDARG00000017910 1290 1.579 - 0.857 - - - - 0.722 - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
42. klf4b klf4b 533 1.568 - 0.704 0.864 - - - - - -
43. rrp7a ENSDARG00000098934 1123 1.566 - 0.749 - - 0.817 - - - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
44. mfap2 ENSDARG00000059367 3774 1.558 - 0.737 - - 0.821 - - - - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
45. flrt3 ENSDARG00000076895 3516 1.551 - 0.793 - - 0.758 - - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
46. ecscr ENSDARG00000087457 319 1.548 - - - - - 0.841 0.707 - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:ZFIN;Acc:ZDB-GENE-050411-37]
47. timm8b ENSDARG00000055708 7291 1.543 - 0.761 - - 0.782 - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
48. znf648 ENSDARG00000104823 1918 1.539 - 0.727 - - - - 0.812 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
49. tubb1 ENSDARG00000053066 364 1.533 - - - - - - 0.808 0.725 - tubulin, beta 1 class VI [Source:ZFIN;Acc:ZDB-GENE-110408-5]
50. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.526 - 0.756 - - 0.770 - - - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
51. angptl7 ENSDARG00000027582, ENSDARG00000110344 1574 1.522 - - - 0.772 - - 0.750 - - angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
52. bxdc2 ENSDARG00000098935 1348 1.518 - 0.810 - - - 0.708 - - - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
53. rfesd ENSDARG00000058725 339 1.506 - - 0.756 - - - - - 0.750 Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
54. nab2 ENSDARG00000078076 108 1.5 - 0.735 - 0.765 - - - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
55. atxn7l2b ENSDARG00000056268 226 1.493 - 0.751 - - - 0.742 - - - ataxin 7-like 2b [Source:ZFIN;Acc:ZDB-GENE-040718-403]
56. ppox ENSDARG00000102167 929 1.491 - 0.771 - - - - - - 0.720 protoporphyrinogen oxidase [Source:ZFIN;Acc:ZDB-GENE-051120-90]
57. six1a ENSDARG00000039304 1183 1.483 - 0.778 - 0.705 - - - - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
58. agpat6 agpat6 587 1.469 - 0.748 - 0.721 - - - - -
59. gnao1a ENSDARG00000016676 8184 0.957 - - - - 0.957 - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
60. setd8a 2549 0.955 - - - - 0.955 - - - - SET domain containing (lysine methyltransferase) 8a
61. alx4a ENSDARG00000088332 895 0.955 - - - - 0.955 - - - - ALX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-070712-3]
62. pcdh18a ENSDARG00000089805 1096 0.955 - - - - 0.955 - - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
63. CPEB4 CPEB4 3249 0.955 - - - - 0.955 - - - -
64. sh3bp5lb 1090 0.954 - - - - 0.954 - - - - SH3-binding domain protein 5-like, b
65. aatkb ENSDARG00000104442 392 0.954 - - - - 0.954 - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
66. ikbkb ENSDARG00000079123 498 0.954 - - - - 0.954 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
67. esrrb ENSDARG00000100847 636 0.954 - - - - 0.954 - - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
68. rassf10a 417 0.953 - - - - 0.953 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
69. nol8 ENSDARG00000044143 425 0.953 - - - - 0.953 - - - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
70. C1H3orf70 C1H3orf70 634 0.953 - - - - 0.953 - - - -
71. gsto2 ENSDARG00000033285 583 0.953 - - - - 0.953 - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
72. her4.3 ENSDARG00000070770 613 0.953 - - - - 0.953 - - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
73. tpcn1 ENSDARG00000062362 563 0.953 - - - - 0.953 - - - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
74. rybpa ENSDARG00000037773 904 0.952 - - - - 0.952 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
75. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.952 - - - - 0.952 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
76. cdan1 ENSDARG00000042261 658 0.952 - - - - 0.952 - - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
77. anapc1 ENSDARG00000075687 488 0.952 - - - - 0.952 - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
78. CR933820.2 CR933820.2 152 0.951 - - - - 0.951 - - - -
79. mettl16 ENSDARG00000055838 818 0.951 - - - - 0.951 - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
80. dhx9 ENSDARG00000079725 1241 0.951 - - - - 0.951 - - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
81. MTA1 ENSDARG00000007198 731 0.951 - - - - 0.951 - - - - metastasis associated 1 [Source:ZFIN;Acc:ZDB-GENE-131121-353]
82. tbx19 ENSDARG00000079187 133 0.951 - - - - 0.951 - - - - T-box 19 [Source:ZFIN;Acc:ZDB-GENE-110411-5]
83. tmem135 ENSDARG00000069157 918 0.951 - - - - 0.951 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
84. usf2 ENSDARG00000020228 2667 0.951 - - - - 0.951 - - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
85. espn ENSDARG00000076414 343 0.951 - - - - 0.951 - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
86. Mar-01 Mar-01 176 0.951 - - - - 0.951 - - - -
87. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 0.951 - - - - 0.951 - - - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
88. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 0.951 - - - - 0.951 - - - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
89. myo9al1 myo9al1 1194 0.95 - - - - 0.950 - - - -
90. hpca ENSDARG00000018397, ENSDARG00000110115 3866 0.95 - - - - 0.950 - - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
91. BX548000.3 BX548000.3 241 0.95 - - - - 0.950 - - - -
92. fzd8a ENSDARG00000045444 802 0.95 - - - - 0.950 - - - - frizzled class receptor 8a [Source:ZFIN;Acc:ZDB-GENE-000328-3]
93. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.949 - - - - 0.949 - - - - interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
94. si:ch211-282k23.2 ENSDARG00000093591 447 0.949 - - - - 0.949 - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
95. adi1 ENSDARG00000020448 1402 0.949 - - - - 0.949 - - - - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
96. invs ENSDARG00000002213 261 0.949 - - - - 0.949 - - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]
97. slc39a13 ENSDARG00000000442 1367 0.949 - - - - 0.949 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
98. C8H1orf174 C8H1orf174 372 0.949 - - - - 0.949 - - - -
99. farp1 ENSDARG00000074381 406 0.949 - - - - 0.949 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
100. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.949 - - - - 0.949 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]

There are 1300 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA