Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-229d11.5

Gene Name Gene ID Reads Annotation
si:dkey-229d11.5 ENSDARG00000094392 33 si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]










Genes with expression patterns similar to si:dkey-229d11.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-229d11.5 ENSDARG00000094392 33 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
2. si:ch211-113a14.14_2 si:ch211-113a14.14_2 156 2.633 0.955 - - - - 0.826 - - 0.852
3. si:dkey-202b22.6 ENSDARG00000045552 190 2.233 - 0.730 0.758 - - 0.745 - - - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
4. crygn2 ENSDARG00000030411 2551 1.974 - 0.974 - - - 1.000 - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
5. CABZ01067727.1 CABZ01067727.1 2 1.925 - - - 0.925 - 1.000 - - -
6. FAM149A ENSDARG00000073709 7 1.913 - - - 0.913 - 1.000 - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
7. bik ENSDARG00000045549 18 1.907 0.907 1.000 - - - - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
8. si:ch211-165l15.1 si:ch211-165l15.1 10 1.89 0.890 1.000 - - - - - - -
9. H2AFX_1 H2AFX_1 28 1.878 - 0.878 - - - 1.000 - - -
10. CRFA31.2 CRFA31.2 12 1.876 - 0.907 - 0.969 - - - - -
11. ptgdsb.2 ENSDARG00000071626 105 1.876 0.890 0.986 - - - - - - - prostaglandin D2 synthase b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030911-3]
12. FAM175B FAM175B 23 1.874 - - - - - 0.959 - - 0.915
13. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.824 0.875 0.949 - - - - - - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
14. si:dkey-121j17.5 ENSDARG00000014232 18 1.818 - 0.818 - - - 1.000 - - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
15. zgc:175008 zgc:175008 55 1.817 - 1.000 - - 0.817 - - - -
16. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.805 - - 0.805 - - 1.000 - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
17. illr4 ENSDARG00000008075 164 1.783 - 0.873 - - - 0.910 - - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
18. si:ch211-13o20.1 si:ch211-13o20.1 30 1.778 - - 0.778 - - 1.000 - - -
19. si:dkey-6o1.2 si:dkey-6o1.2 12 1.778 - 1.000 - - 0.778 - - - -
20. USH1G USH1G 25 1.76 - - 0.760 - - 1.000 - - -
21. stx11a ENSDARG00000044039 39 1.758 - 1.000 0.758 - - - - - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
22. ENSDARG00000074422 ENSDARG00000074422 61 1.749 0.890 - - - 0.859 - - - -
23. CR354540.1 ENSDARG00000004051 10 1.746 - - - 0.746 - 1.000 - - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
24. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1.739 - - - - - 0.826 - - 0.913 family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
25. ARX ARX 71 1.734 0.907 - - - - - - - 0.827
26. skap2 ENSDARG00000000906 146 1.731 - 0.847 - - - - - - 0.884 src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
27. si:dkeyp-46h3.6 ENSDARG00000087363 14 1.726 - - - - 0.726 1.000 - - - si:dkeyp-46h3.6 [Source:ZFIN;Acc:ZDB-GENE-060503-90]
28. cables2b ENSDARG00000017154 131 1.708 0.869 0.839 - - - - - - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
29. ADAM12 ENSDARG00000116062 35 1.703 - 0.988 - 0.715 - - - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
30. si:dkey-29b11.3 ENSDARG00000087388 29 1.697 0.907 - - - - 0.790 - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
31. im:6904045 ENSDARG00000115174 179 1.696 0.759 0.937 - - - - - - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
32. zgc:112437 ENSDARG00000009215 50 1.683 - - 0.829 - - - - - 0.854 zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
33. si:dkey-253d23.3 ENSDARG00000095643 66 1.681 0.900 0.781 - - - - - - - si:dkey-253d23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-330]
34. chd 56 1.675 - 0.845 0.830 - - - - - - chordin
35. BEND2_1 BEND2_1 45 1.666 - - - 0.868 - - - - 0.798
36. dgcr6 ENSDARG00000005500 479 1.654 - 0.854 - - - - - - 0.800 DiGeorge syndrome critical region gene 6 [Source:ZFIN;Acc:ZDB-GENE-040912-125]
37. zgc:193811 ENSDARG00000076745 72 1.653 - - 0.821 - - 0.832 - - - zgc:193811 [Source:ZFIN;Acc:ZDB-GENE-081022-43]
38. pde10a ENSDARG00000003449 60 1.642 0.816 - - - - 0.826 - - - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
39. sytl2 sytl2 259 1.636 0.884 0.752 - - - - - - -
40. elf3 ENSDARG00000077982 211 1.632 0.883 0.749 - - - - - - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
41. OVOL1 75 1.625 - 0.773 0.852 - - - - - - ovo-like zinc finger 1, transcript variant X1
42. RNF39 RNF39 52 1.617 0.907 - - - - 0.710 - - -
43. l3mbtl1b ENSDARG00000074346 120 1.613 0.761 - - - - - - - 0.852 l(3)mbt-like 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-100922-38]
44. arhgef11 ENSDARG00000052482 24 1.602 0.703 - - 0.899 - - - - - Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]
45. CABZ01039859.1 ENSDARG00000076361 540 1.581 - 0.878 0.703 - - - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
46. BX470211.1 ENSDARG00000105629 111 1.576 - 0.746 - - - 0.830 - - -
47. zmym2 ENSDARG00000027353 96 1.565 0.786 - - - - 0.779 - - - zinc finger, MYM-type 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2408]
48. elp4 ENSDARG00000008852 253 1.56 0.706 - - - - - - - 0.854 elongator acetyltransferase complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-114]
49. CABZ01089980.1 ENSDARG00000117446 16 1.559 0.840 - - - 0.719 - - - -
50. CU683898.1 CU683898.1 203 1.556 - 0.801 - - - - - - 0.755
51. clk4b ENSDARG00000005908 915 1.554 - 0.763 - - - - - - 0.791 CDC-like kinase 4b [Source:ZFIN;Acc:ZDB-GENE-050227-19]
52. brip1 ENSDARG00000074410, ENSDARG00000113993 501 1.546 0.709 0.837 - - - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
53. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 1.545 - - - - - 0.710 - - 0.835 si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
54. LAYN LAYN 94 1.527 0.750 0.777 - - - - - - -
55. fam184a ENSDARG00000014081 93 1.521 - - 0.786 - - - - - 0.735 family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
56. smad9 368 1.502 0.797 0.705 - - - - - - - SMAD family member 9, transcript variant X1
57. snip1 ENSDARG00000087528 275 1.494 - 0.748 - - - - - - 0.746 Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]
58. CABZ01100267.1 CABZ01100267.1 104 1.492 - - - 0.752 - 0.740 - - -
59. ripply3 ENSDARG00000036974 30 1.479 - - - 0.725 - 0.754 - - - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
60. si:ch211-51h9.7 ENSDARG00000074720 227 1.47 - - - - - 0.701 - - 0.769 si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
61. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.467 - 0.719 - - - - - - 0.748 Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
62. zgc:66014 817 1.463 0.713 0.750 - - - - - - - zgc:66014, transcript variant X6
63. lrch4 ENSDARG00000068258 24 1 - 1.000 - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
64. si:ch211-203b20.4 ENSDARG00000091790 3 1 - - - - - 1.000 - - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]
65. si:ch211-272h9.2 si:ch211-272h9.2 1 1 - - - - - 1.000 - - -
66. CU550716.4 CU550716.4 14 1 - - - - - 1.000 - - -
67. cadm1b ENSDARG00000042677 277 1 - 1.000 - - - - - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
68. slc15a1a ENSDARG00000100315 23 1 - - - - - 1.000 - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
69. gata4 ENSDARG00000098952 11 1 - 1.000 - - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
70. crygm2a ENSDARG00000057536 1 1 - - - - - 1.000 - - - crystallin, gamma M2a [Source:ZFIN;Acc:ZDB-GENE-050516-9]
71. LRRTM4 2 1 - - - - - 1.000 - - - leucine rich repeat transmembrane neuronal 4
72. CABZ01049058.1 CABZ01049058.1 7 1 - - - - - 1.000 - - -
73. CR387932.1 ENSDARG00000097344 2 1 - - - - - 1.000 - - -
74. CR735107.1 CR735107.1 6 1 - 1.000 - - - - - - -
75. CT868708.1 ENSDARG00000097601 2 1 - - - - - 1.000 - - -
76. pdgfrb ENSDARG00000100897 0 1 - - - - - 1.000 - - - platelet-derived growth factor receptor, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030805-2]
77. ptprq ENSDARG00000008849 3 1 - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type, Q [Source:ZFIN;Acc:ZDB-GENE-050419-183]
78. igfbp6b ENSDARG00000090833 37 1 - - - - - 1.000 - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
79. RAB37 RAB37 0 1 - - - - - 1.000 - - -
80. zgc:136872 ENSDARG00000008553 9 1 - - - - - 1.000 - - - zgc:136872 [Source:ZFIN;Acc:ZDB-GENE-060421-5204]
81. si:dkey-162h11.3 41 1 - - - - - 1.000 - - - si:dkey-162h11.3, transcript variant X2
82. rxfp3.2a 11 1 - - - - 1.000 - - - - relaxin/insulin-like family peptide receptor 3.2a
83. GPR113 GPR113 0 1 - - - - - 1.000 - - -
84. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 - - - - - 1.000 - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
85. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - - - - - 1.000 - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
86. BX248496.1 BX248496.1 0 1 - - - - - 1.000 - - -
87. fubp3 ENSDARG00000086896 21 1 - - - - - 1.000 - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
88. si:dkey-93m18.3 ENSDARG00000092664 30 1 - - - - - 1.000 - - - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
89. CR749167.1 ENSDARG00000100165 38 1 - - - - - 1.000 - - -
90. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - - - - - 1.000 - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
91. foxe1 ENSDARG00000079266 6 1 - - - - - 1.000 - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
92. si:ch211-193e5.3 si:ch211-193e5.3 0 1 - - - - - 1.000 - - -
93. CR457462.1 CR457462.1 11 1 - 1.000 - - - - - - -
94. zgc:154125 ENSDARG00000071463 7 1 - - - - - 1.000 - - - zgc:154125 [Source:ZFIN;Acc:ZDB-GENE-061013-717]
95. fgf22 ENSDARG00000076510, ENSDARG00000114053, ENSDARG00000115407 3 1 - - - - - 1.000 - - - fibroblast growth factor 22 [Source:ZFIN;Acc:ZDB-GENE-050208-380]
96. als2a ENSDARG00000075111 29 1 - 1.000 - - - - - - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
97. zgc:92275 ENSDARG00000034048 9 1 - - - - - 1.000 - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
98. ftr42 4 1 - - - - - 1.000 - - - finTRIM family, member 42
99. MYO15B ENSDARG00000074852 6 1 - - - - - 1.000 - - - myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
100. ms4a17a.2 ENSDARG00000105674 32 1 - 1.000 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]

There are 1324 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA