Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch73-46j18.5

Gene Name Gene ID Reads Annotation
si:ch73-46j18.5 ENSDARG00000092467 6002 si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]










Genes with expression patterns similar to si:ch73-46j18.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-46j18.5 ENSDARG00000092467 6002 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
2. srrm1 ENSDARG00000001244 4972 3.06 - 0.797 0.783 - 0.712 - 0.768 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
3. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 2.418 - 0.768 - - 0.845 - 0.805 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
4. hnrpl 6412 2.41 - - 0.750 - 0.944 - - - 0.716 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
5. FP016176.1 FP016176.1 7030 2.334 - 0.832 - - 0.751 - 0.751 - -
6. ppp2r1a ppp2r1a 11291 2.325 - 0.846 - - - - 0.722 - 0.757
7. midn ENSDARG00000018524 7559 2.324 - 0.864 - - - 0.729 0.731 - - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
8. cand1 ENSDARG00000017841 8164 2.303 0.710 0.733 - - 0.860 - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
9. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.279 - - 0.784 - - - 0.777 - 0.718 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
10. usp7 ENSDARG00000073710 7017 2.271 - - 0.755 - - 0.768 0.748 - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
11. hmgb3a ENSDARG00000056725 15668 2.242 - 0.717 - - - - 0.733 - 0.792 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
12. smarca5 ENSDARG00000052348 15433 2.235 - 0.718 - - - - 0.815 - 0.702 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
13. puf60b ENSDARG00000001241 13827 2.231 - 0.723 - - 0.743 - - - 0.765 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
14. tmpob ENSDARG00000022978 8121 2.226 - - 0.760 - - - 0.755 - 0.711 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
15. rbb4 rbb4 15541 2.204 - - 0.730 - - - 0.717 - 0.757
16. rrm1 ENSDARG00000014017 7296 2.176 - 0.716 - - - - 0.743 - 0.717 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
17. tgif1 ENSDARG00000059337 4020 2.171 - 0.754 0.701 - - - 0.716 - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
18. bcor ENSDARG00000017798 1719 2.158 - 0.709 0.735 - - - 0.714 - - BCL6 corepressor [Source:ZFIN;Acc:ZDB-GENE-040408-1]
19. ptenb ENSDARG00000056623 5783 1.792 - - - - 0.977 - 0.815 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
20. h2afva ENSDARG00000068820 16427 1.737 - - - - 0.935 - 0.802 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
21. ppm1g ENSDARG00000075559 6516 1.735 - 0.794 - - 0.941 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
22. CCDC106 CCDC106 1908 1.707 - - - - 0.877 - 0.830 - -
23. nkd1 ENSDARG00000020053 4450 1.7 - 0.752 - - 0.948 - - - - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
24. plcg1 ENSDARG00000038442 5324 1.692 - - - - 0.965 - - - 0.727 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
25. nr2f6b ENSDARG00000003165 5855 1.672 - - - - 0.958 - 0.714 - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
26. hmgb2b ENSDARG00000053990 11519 1.656 0.778 - - - - - 0.878 - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
27. HNRNPAB HNRNPAB 22267 1.651 - - - - - - 0.846 - 0.805
28. ctnnb1 ENSDARG00000014571 12004 1.65 - 0.854 0.796 - - - - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
29. trim71 ENSDARG00000075593 2750 1.649 - 0.899 0.750 - - - - - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
30. foxp4 ENSDARG00000076120 9458 1.648 - 0.927 0.721 - - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
31. kmt2cb ENSDARG00000075560 4816 1.644 - 0.802 - - - - 0.842 - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
32. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 1.64 - 0.852 - - - - 0.788 - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
33. RNF38 ENSDARG00000062055 3901 1.639 - - - - 0.868 - 0.771 - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
34. hoxb3a ENSDARG00000029263 5493 1.639 - 0.812 - - 0.827 - - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
35. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.639 - 0.872 0.767 - - - - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
36. rap1gap ENSDARG00000056554, ENSDARG00000110356 1284 1.624 - 0.917 - - - - 0.707 - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
37. cplx4b ENSDARG00000059486 3192 1.623 - 0.858 0.765 - - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
38. ccne2 ENSDARG00000098529 4695 1.619 - - - - 0.846 - 0.773 - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
39. pa2g4b ENSDARG00000070657 7999 1.616 - 0.850 - - - - 0.766 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
40. bysl ENSDARG00000001057 2621 1.612 - 0.743 - - 0.869 - - - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
41. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.608 - - - - - 0.781 0.827 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
42. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.603 - 0.800 - - - - 0.803 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
43. vta1 ENSDARG00000013732 6072 1.601 - 0.751 - - 0.850 - - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
44. whsc1l1 8544 1.598 - - - - - - 0.791 - 0.807 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
45. pl10 pl10 10795 1.596 - 0.763 - - - - 0.833 - -
46. rbm28 ENSDARG00000025332 2685 1.591 - - 0.721 - 0.870 - - - - RNA binding motif protein 28 [Source:ZFIN;Acc:ZDB-GENE-040426-960]
47. sltm ENSDARG00000052728 6234 1.589 - - - - - 0.852 0.737 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
48. scocb ENSDARG00000002217 1844 1.586 0.710 - - - 0.876 - - - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
49. tead1a ENSDARG00000028159 3574 1.584 - 0.714 - - 0.870 - - - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
50. slc35d2 ENSDARG00000089837 1606 1.581 - 0.708 - - 0.873 - - - - solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 [Source:ZFIN;Acc:ZDB-GENE-080125-1]
51. kidins220b ENSDARG00000017338 1937 1.579 - 0.707 - - 0.872 - - - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
52. mbd3a ENSDARG00000061774 4047 1.579 - 0.728 - - 0.851 - - - - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
53. cicb ENSDARG00000055502 1356 1.577 - 0.703 - - 0.874 - - - - capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
54. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.577 - 0.862 - - - - 0.715 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
55. gkap1 ENSDARG00000068123 2645 1.576 - 0.785 0.791 - - - - - - G kinase anchoring protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2485]
56. tle2 5014 1.576 - 0.727 - - - - 0.849 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
57. CREBZF ENSDARG00000089787 4261 1.572 - 0.860 - - - - 0.712 - - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
58. mllt10 ENSDARG00000045401 7557 1.572 - 0.736 - - - - 0.836 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
59. kpna3 ENSDARG00000052641 5347 1.571 - 0.819 - - - - 0.752 - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
60. srsf11 ENSDARG00000098574 12801 1.568 - - - - - - 0.761 - 0.807 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
61. psat1 ENSDARG00000016733 8084 1.567 0.741 - - - - - 0.826 - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
62. IM:7163548 IM:7163548 6540 1.563 - - - - - - 0.821 - 0.742
63. srsf4 ENSDARG00000105293 9657 1.56 - 0.796 - - - - 0.764 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
64. carm1 ENSDARG00000018698 5599 1.559 - - - - - - 0.789 - 0.770 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
65. luc7l3 ENSDARG00000014366 4416 1.559 - - - - 0.856 - 0.703 - - LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
66. nucks1a ENSDARG00000078473 28285 1.558 - 0.754 0.804 - - - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
67. kifc1 ENSDARG00000001558 6658 1.553 - - - - 0.832 - 0.721 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
68. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.552 - - - - - - 0.838 - 0.714 small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
69. pbx4 ENSDARG00000052150 35676 1.551 0.735 - - - - - 0.816 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
70. smarcd1 ENSDARG00000019004 6028 1.55 - - - - - - 0.760 - 0.790 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
71. trrap ENSDARG00000100623 3429 1.549 - 0.728 - - - - 0.821 - - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
72. ccnt1 ENSDARG00000017525 1888 1.546 - 0.748 - - - - 0.798 - - cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
73. prmt1 ENSDARG00000010246 11311 1.545 - 0.806 - - - - 0.739 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
74. ube2e3 ENSDARG00000012244 8909 1.545 - - 0.710 - 0.835 - - - - ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-408]
75. cx43.4 ENSDARG00000007099 16369 1.543 - 0.755 - - 0.788 - - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
76. hdgfrp2 7462 1.543 - 0.822 - - - - - - 0.721 hepatoma-derived growth factor-related protein 2, transcript variant X1
77. smarca4 smarca4 9726 1.542 0.718 - - - - - 0.824 - -
78. sp4 ENSDARG00000005186 2904 1.542 - 0.726 - - - 0.816 - - - sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
79. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 1.536 - 0.787 - - - - 0.749 - - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
80. sh2d3ca ENSDARG00000028099 1037 1.535 - 0.783 - - - - 0.752 - - SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
81. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.533 - - 0.783 - - - - - 0.750 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
82. nsd1a ENSDARG00000060016 2974 1.528 - - 0.700 - - - 0.828 - - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
83. Sep-06 Sep-06 5465 1.524 - 0.763 - - - - 0.761 - -
84. TTYH3 TTYH3 1841 1.52 - 0.765 - - - - 0.755 - -
85. caprin1b ENSDARG00000054272 7033 1.515 - - - - - - 0.741 - 0.774 cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
86. si:ch211-288g17.3 ENSDARG00000070959 2425 1.514 - 0.775 0.739 - - - - - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
87. srsf3b ENSDARG00000059360 14888 1.513 - - - - - 0.717 - - 0.796 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
88. smc1al ENSDARG00000058203 8838 1.512 - - - - - - 0.795 - 0.717 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
89. ncalda ENSDARG00000070688 5069 1.511 - 0.737 - - - - 0.774 - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
90. u2af2b ENSDARG00000011740 6946 1.511 - - 0.743 - - - 0.768 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
91. bahcc1 bahcc1 1934 1.51 - 0.749 - - - - 0.761 - -
92. sumo3a ENSDARG00000028119 13447 1.51 0.786 - - - - - - - 0.724 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
93. nckap5l ENSDARG00000079148 4227 1.509 - 0.739 - - - - 0.770 - - NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
94. kmt2bb ENSDARG00000060697 5230 1.507 - 0.716 0.791 - - - - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
95. papola ENSDARG00000009585 9567 1.506 - - 0.752 - - 0.754 - - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
96. EML4_1 EML4_1 8736 1.504 - 0.800 - - - 0.704 - - -
97. ptbp1a ENSDARG00000019362 6290 1.5 - - - - 0.757 - - - 0.743 polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
98. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.499 - - 0.708 - - - 0.791 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
99. ddx39ab ENSDARG00000015111 11619 1.498 - - - - - - 0.743 - 0.755 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
100. GABARAP GABARAP 8341 1.496 - 0.760 - - - - 0.736 - -

There are 1122 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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