Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-243a22.1

Gene Name Gene ID Reads Annotation
si:ch211-243a22.1 si:ch211-243a22.1 42










Genes with expression patterns similar to si:ch211-243a22.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-243a22.1 si:ch211-243a22.1 42 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. LRRK1_1 LRRK1_1 11 2.764 0.764 1.000 - - - 1.000 - - -
3. ropn1l ENSDARG00000058370, ENSDARG00000114122 57 2.443 0.808 0.723 0.912 - - - - - - rhophilin associated tail protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040724-235]
4. pax7b ENSDARG00000070818 282 2.333 - 0.866 0.732 - - 0.735 - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
5. BX927122.3 BX927122.3 19 2 - 1.000 - - - 1.000 - - -
6. nid2b ENSDARG00000009471 4 2 - 1.000 - - - 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
7. si:ch211-108c6.2 14 2 - 1.000 - - - 1.000 - - - si:ch211-108c6.2
8. PCDH10 PCDH10 7 2 - 1.000 - - - 1.000 - - -
9. amy2a ENSDARG00000013856 13 2 - 1.000 - - - - 1.000 - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
10. GABRA3 ENSDARG00000090883 5 2 - 1.000 - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
11. apnl ENSDARG00000090900 21 1.997 - 1.000 0.997 - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
12. si:dkey-81p22.11 ENSDARG00000093797 68 1.966 - 1.000 0.966 - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
13. DOCK4 DOCK4 78 1.903 - 1.000 0.903 - - - - - -
14. slc15a1a ENSDARG00000100315 23 1.855 - 1.000 - - - - - 0.855 - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
15. dclk1a ENSDARG00000018856 177 1.806 - - 0.961 - - 0.845 - - - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
16. BX005085.2 ENSDARG00000098122 196 1.806 - - 0.887 - - - 0.919 - -
17. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.771 - 1.000 - - - 0.771 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
18. si:dkey-103d23.5 26 1.771 - - - - - 0.771 1.000 - - si:dkey-103d23.5
19. CABZ01057951.1 CABZ01057951.1 10 1.764 0.764 1.000 - - - - - - -
20. erap2 ENSDARG00000098618 16 1.764 0.764 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
21. ABCC6 ABCC6 5 1.764 0.764 1.000 - - - - - - -
22. sytl4 ENSDARG00000102433 19 1.764 0.764 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
23. si:dkey-24p1.7 ENSDARG00000089404 7 1.764 0.764 1.000 - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
24. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.764 0.764 - - - - 1.000 - - -
25. CABZ01078314.1 CABZ01078314.1 44 1.76 0.764 - 0.996 - - - - - -
26. si:ch211-198c19.2 si:ch211-198c19.2 165 1.759 - 1.000 - - - - - 0.759 -
27. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.754 - 1.000 - - - 0.754 - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
28. si:ch73-346o4.3 si:ch73-346o4.3 29 1.738 - - - - - 1.000 - 0.738 -
29. pole2 ENSDARG00000100028 42 1.734 0.734 - - - - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
30. ITPRIPL2 88 1.733 - 1.000 - - - - - 0.733 - inositol 1,4,5-trisphosphate receptor interacting protein like 2
31. samd10b ENSDARG00000094377 18 1.725 - - - - 0.725 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
32. NUGGC NUGGC 9 1.718 - - - - - 1.000 0.718 - -
33. zgc:173593 ENSDARG00000077360 10 1.718 - 1.000 - - - - 0.718 - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
34. rx3 ENSDARG00000052893 43 1.718 - - - - - 1.000 0.718 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
35. CR626874.1 ENSDARG00000100141 55 1.718 - 1.000 - - - - 0.718 - -
36. BX321870.1 ENSDARG00000098519 9 1.718 - 1.000 - - - - 0.718 - -
37. CABZ01112732.1 ENSDARG00000068453 4 1.718 - - - - - 1.000 0.718 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
38. si:ch211-202m22.1 ENSDARG00000094491 24 1.718 - - - - - 1.000 0.718 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
39. slc25a29 ENSDARG00000057352 9 1.718 - 1.000 - - - - 0.718 - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
40. SMARCA4 ENSDARG00000104339 48 1.717 - 1.000 - - - 0.717 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
41. pcyox1 ENSDARG00000103052 20 1.715 0.715 1.000 - - - - - - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
42. rab3c ENSDARG00000014462, ENSDARG00000042803 508 1.711 - 0.883 0.828 - - - - - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
43. tnxb 30 1.707 0.707 1.000 - - - - - - - tenascin XB
44. mapk15 ENSDARG00000100822 157 1.67 - 0.887 - 0.783 - - - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
45. F2RL3 ENSDARG00000079399 29 1.665 - - 0.947 - - - 0.718 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
46. FAM120A ENSDARG00000075021 73 1.652 - 0.726 0.926 - - - - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
47. wu:fd55e03 wu:fd55e03 41 1.611 0.764 - - - - - 0.847 - -
48. si:ch73-173m3.3 si:ch73-173m3.3 425 1.586 - 0.872 - - 0.714 - - - -
49. si:dkey-193i10.3 si:dkey-193i10.3 70 1.583 - 0.730 - - - - 0.853 - -
50. BX324131.3 BX324131.3 278 1.532 - 0.760 - - - 0.772 - - -
51. WDR93 ENSDARG00000087191 51 1.517 0.764 - - - 0.753 - - - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
52. PELI3 ENSDARG00000087452, ENSDARG00000111338 166 1.509 - - - - - - 0.780 0.729 - pellino E3 ubiquitin protein ligase family member 3 [Source:ZFIN;Acc:ZDB-GENE-110304-4]
53. ZNF337_23 ZNF337_23 39 1.508 0.790 - - - - - 0.718 - -
54. CABZ01027547.1 CABZ01027547.1 128 1.496 - - - - 0.761 0.735 - - -
55. efhb ENSDARG00000069703 9 1.482 0.764 - - - - - 0.718 - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
56. cacna1sb ENSDARG00000042552 1320 1.477 - - 0.769 - - - - 0.708 - calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
57. p2rx4b ENSDARG00000042452 14 1.477 - - - - 0.759 - 0.718 - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
58. ELMO1 ENSDARG00000098753 114 1.471 0.764 - - - - 0.707 - - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
59. csnk1g1 ENSDARG00000104342 57 1.454 - - - - - 0.722 0.732 - - casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]
60. si:dkey-13m3.1 si:dkey-13m3.1 45 1.438 - - - - - 0.720 0.718 - -
61. cabp5a ENSDARG00000002576 14 1.428 - - - - 0.710 - 0.718 - - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
62. VSIG10L ENSDARG00000089237 12 1.418 - - - 0.700 - - 0.718 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
63. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - 1.000 - - -
64. il21r il21r 74 1 - - - - - 1.000 - - -
65. htr1bd htr1bd 8 1 - - - - - 1.000 - - -
66. egr2a ENSDARG00000044098 1101 1 - 1.000 - - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
67. si:dkey-253d23.9 ENSDARG00000074820 24 1 - - - - - 1.000 - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
68. leprel4 leprel4 34 1 - - - - - 1.000 - - -
69. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1 - - - - - 1.000 - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
70. cep89 ENSDARG00000005092 4 1 - - - - - 1.000 - - - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
71. MOB2 MOB2 4 1 - 1.000 - - - - - - -
72. slc1a9 ENSDARG00000098269 12 1 - 1.000 - - - - - - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
73. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - 1.000 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
74. MYL2 MYL2 7 1 - 1.000 - - - - - - -
75. klhl24 klhl24 40 1 - - - - - 1.000 - - -
76. FP236851.1 FP236851.1 10 1 - 1.000 - - - - - - -
77. GRIN2B GRIN2B 140 1 - 1.000 - - - - - - -
78. pik3ap1 ENSDARG00000078285 23 1 - - - - - 1.000 - - - phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
79. SNORD59 SNORD59 7 1 - 1.000 - - - - - - -
80. cybb ENSDARG00000056615 177 1 - 1.000 - - - - - - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
81. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - 1.000 - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
82. gad1b ENSDARG00000027419 440 1 - 1.000 - - - - - - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
83. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - 1.000 - - - - - - -
84. kcnc3b ENSDARG00000098816 0 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 3b [Source:ZFIN;Acc:ZDB-GENE-100901-2]
85. nab2 ENSDARG00000078076 108 1 - - - - - 1.000 - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
86. HELZ2_1 ENSDARG00000012600 53 1 - 1.000 - - - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
87. klc4 ENSDARG00000086985 4 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
88. si:dkey-225k4.1 ENSDARG00000092045 47 1 - 1.000 - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
89. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - 1.000 - - - - - - -
90. si:dkeyp-33e11.1 6 1 - 1.000 - - - - - - - si:dkeyp-33e11.1, transcript variant X3
91. si:dkey-63d15.12 ENSDARG00000075480 9 1 - - - - - 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
92. itpr2 ENSDARG00000011909 3 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
93. GLS2 GLS2 10 1 - 1.000 - - - - - - -
94. neu3.5 ENSDARG00000096368 5 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
95. si:dkey-208k4.10 si:dkey-208k4.10 1 1 - - - - - 1.000 - - -
96. ALOX5_2 ALOX5_2 6 1 - 1.000 - - - - - - -
97. grin2bb ENSDARG00000030376 60 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
98. lpar5b ENSDARG00000068638 2 1 - - - - - 1.000 - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
99. th2 ENSDARG00000038384 1 1 - - - - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
100. CU468896.2 CU468896.2 38 1 - - - - - 1.000 - - -

There are 1423 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA