Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-239j9.1

Gene Name Gene ID Reads Annotation
si:ch211-239j9.1 ENSDARG00000096319 27 si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]










Genes with expression patterns similar to si:ch211-239j9.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-239j9.1 ENSDARG00000096319 27 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
2. b3galtla b3galtla 111 2.457 0.711 1.000 - - - - 0.746 - -
3. si:ch211-152l15.4 si:ch211-152l15.4 13 2 - 1.000 - - - - 1.000 - -
4. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 2 - 1.000 - - - - 1.000 - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
5. abcc9 ENSDARG00000015985 20 2 - 1.000 - - - 1.000 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
6. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 2 - - - - - 1.000 1.000 - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
7. CU457778.1 ENSDARG00000098976 38 2 - 1.000 - - - 1.000 - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
8. si:dkey-19a16.2 ENSDARG00000058794 8 2 - 1.000 - - - - 1.000 - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
9. si:dkey-20f20.3 si:dkey-20f20.3 7 2 - 1.000 - - - 1.000 - - -
10. dao.2 ENSDARG00000035603 8 2 - - - - - 1.000 1.000 - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
11. slc27a6 ENSDARG00000046053 57 1.949 0.987 - - - - - 0.962 - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
12. si:dkeyp-73d8.8 ENSDARG00000094045 17 1.931 - - - - - 1.000 0.931 - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
13. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 1.862 0.862 - - - - 1.000 - - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
14. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1.795 - - - - 0.810 0.985 - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
15. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 1.774 - 0.774 - - - 1.000 - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
16. CR391998.1 ENSDARG00000091817 15 1.761 - - - - 0.761 - 1.000 - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
17. si:ch211-214j8.12 ENSDARG00000092556 65 1.76 - - - - - 0.871 0.889 - - si:ch211-214j8.12 [Source:ZFIN;Acc:ZDB-GENE-060526-102]
18. figf 48 1.751 - 1.000 - - - 0.751 - - - c-fos induced growth factor, transcript variant X2
19. CU652893.1 ENSDARG00000104131 3 1.75 - 1.000 0.750 - - - - - -
20. si:ch211-224l10.4 ENSDARG00000088762 36 1.742 0.935 - - - - 0.807 - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
21. pdcl ENSDARG00000009480 12 1.734 - 0.734 - - - 1.000 - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
22. zgc:110130 ENSDARG00000039203 352 1.728 0.795 0.933 - - - - - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
23. SRR SRR 544 1.727 0.881 - - - - - 0.846 - -
24. klhl42 ENSDARG00000006011 46 1.713 - 1.000 0.713 - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
25. erap2 ENSDARG00000098618 16 1.708 - 1.000 - - - 0.708 - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
26. spns3 ENSDARG00000035459, ENSDARG00000115176 42 1.677 - - - - - 0.781 0.896 - - spinster homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060531-7]
27. tmprss4b ENSDARG00000012860 6 1.652 - - 0.750 - - 0.902 - - - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
28. flnb ENSDARG00000092281 10 1.606 - - 0.750 - - 0.856 - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
29. smarcal1 ENSDARG00000102265 1921 1.547 0.799 - - - - - 0.748 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
30. CU856681.1 CU856681.1 7 1.497 - 0.728 - 0.769 - - - - -
31. si:dkey-40i22.5 si:dkey-40i22.5 8 1.475 - - - 0.738 - 0.737 - - -
32. si:ch211-106h4.4 ENSDARG00000093629 9 1.437 - - - 0.729 - 0.708 - - - si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]
33. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
34. dclre1a ENSDARG00000091768 94 1 - 1.000 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
35. sytl4 ENSDARG00000102433 19 1 - 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
36. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
37. CABZ01085979.1 CABZ01085979.1 4 1 - 1.000 - - - - - - -
38. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
39. CU467888.1 CU467888.1 30 1 - 1.000 - - - - - - -
40. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - 1.000 - - - - - - -
41. si:ch211-57m13.9 ENSDARG00000095884 10 1 - 1.000 - - - - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
42. CCDC66 2 1 - 1.000 - - - - - - - coiled-coil domain containing 66
43. rspo3 ENSDARG00000070081 4 1 - - - - - 1.000 - - - R-spondin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9814]
44. ninj2 ENSDARG00000079824 1 1 - 1.000 - - - - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
45. LRTM1 ENSDARG00000098742 21 1 - - - - - 1.000 - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
46. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
47. slc15a1a ENSDARG00000100315 23 1 - 1.000 - - - - - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
48. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - 1.000 - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
49. atg9b ENSDARG00000055292 155 1 - - - - - 1.000 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
50. sez6l ENSDARG00000100594 35 1 - 1.000 - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
51. btr20 ENSDARG00000102992 4 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
52. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - 1.000 - - -
53. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1 - 1.000 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
54. zgc:173556 82 1 - - - - - - 1.000 - - zgc:173556
55. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
56. cx45.6 cx45.6 26 1 - - - - - 1.000 - - -
57. igsf5 igsf5 85 1 - 1.000 - - - - - - -
58. zgc:172051 ENSDARG00000086569 12 1 - - - - - 1.000 - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
59. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 - 1.000 - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
60. SAMHD1 ENSDARG00000071288 0 1 - 1.000 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
61. swsap1 ENSDARG00000093423 14 1 - 1.000 - - - - - - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
62. nmrk1 ENSDARG00000037913 18 1 - 1.000 - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
63. zgc:66455 ENSDARG00000052375 3 1 - 1.000 - - - - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
64. FBXO40_1 FBXO40_1 59 1 - 1.000 - - - - - - -
65. nlrc3 ENSDARG00000103146 6 1 - 1.000 - - - - - - - NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]
66. gpc2 ENSDARG00000104217 10 1 - 1.000 - - - - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
67. DNAJC11 1 1 - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C11
68. cdk5r1a ENSDARG00000037916 46 1 - 1.000 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
69. zgc:152857 ENSDARG00000041034 7 1 - - - - - 1.000 - - - zgc:152857 [Source:ZFIN;Acc:ZDB-GENE-060929-72]
70. TTC34 ENSDARG00000091221 3 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
71. TRIM14_5 TRIM14_5 2 1 - - - - - 1.000 - - -
72. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - - - - - 1.000 - - -
73. si:dkey-27p18.3 ENSDARG00000092228 38 1 - - - - - - 1.000 - - si:dkey-27p18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-287]
74. SPP2 ENSDARG00000095590 5 1 - - - - - 1.000 - - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
75. si:ch211-212b13.1 si:ch211-212b13.1 1 1 - - - - - 1.000 - - -
76. irg1 22 1 - - - - - 1.000 - - - immunoresponsive 1 homolog (mouse)
77. ptpn6_1 ENSDARG00000089043 22 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
78. adra1bb ENSDARG00000041173, ENSDARG00000116032 5 1 - - - - - 1.000 - - - adrenoceptor alpha 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-51]
79. C24H11orf65 C24H11orf65 1 1 - 1.000 - - - - - - -
80. sts ENSDARG00000053241 10 1 - - - - - 1.000 - - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
81. BX569789.4 BX569789.4 3 1 - 1.000 - - - - - - -
82. pcdh1g18 ENSDARG00000099447 7 1 - 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
83. CABZ01081748.1 ENSDARG00000102139 31 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
84. supt3h ENSDARG00000098141 18 1 - 1.000 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
85. prl ENSDARG00000037946 80 1 - 1.000 - - - - - - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
86. CABZ01068324.1 CABZ01068324.1 4 1 - 1.000 - - - - - - -
87. si:ch211-145h19.2 7 1 - - - - - - 1.000 - - si:ch211-145h19.2
88. st6gal1 ENSDARG00000044514 142 1 - 1.000 - - - - - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
89. ucn3l ENSDARG00000087241 29 1 - - - - - 1.000 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
90. CABZ01007222.1 CABZ01007222.1 78 1 - 1.000 - - - - - - -
91. tmem178 ENSDARG00000020758 77 1 - 1.000 - - - - - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
92. CABZ01021538.1 CABZ01021538.1 67 1 - 1.000 - - - - - - -
93. gpr61 ENSDARG00000055570 128 1 - 1.000 - - - - - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
94. wdr17 ENSDARG00000075098 83 1 - 1.000 - - - - - - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
95. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - 1.000 - - - - - - -
96. vcam1 vcam1 243 1 - 1.000 - - - - - - -
97. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - 1.000 - - - - - - -
98. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - 1.000 - - - - - - -
99. si:ch211-198c19.2 si:ch211-198c19.2 165 1 - 1.000 - - - - - - -
100. si:ch211-66k16.28 ENSDARG00000088423 80 1 - - - - - 1.000 - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]

There are 1101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA