Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-223a21.3

Gene Name Gene ID Reads Annotation
si:ch211-223a21.3 ENSDARG00000104737 28 si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]










Genes with expression patterns similar to si:ch211-223a21.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-223a21.3 ENSDARG00000104737 28 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
2. BX004980.1 ENSDARG00000099680 10 2.61 - - - 0.809 - 1.000 - 0.801 -
3. CU459160.1 CU459160.1 104 2.486 - - - - - 0.901 0.836 - 0.749
4. itga6l ENSDARG00000056018 1 2 - - - - - - 1.000 1.000 - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
5. pcyox1 ENSDARG00000103052 20 2 - - - - - 1.000 1.000 - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
6. CU469509.3 CU469509.3 1 2 1.000 - - - - - - 1.000 -
7. ntf7 ntf7 72 2 1.000 1.000 - - - - - - -
8. ANGEL1 ENSDARG00000077567 38 2 - - - - - 1.000 1.000 - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
9. CYP46A1 CYP46A1 16 1.978 - 0.978 - - - - - 1.000 -
10. MDFI ENSDARG00000089564 8 1.978 1.000 0.978 - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
11. rag2 ENSDARG00000052121 15 1.973 - - - - - 0.973 1.000 - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
12. si:dkey-209n16.2 ENSDARG00000095914 27 1.969 1.000 - - - - 0.969 - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
13. si:dkey-161j23.5 ENSDARG00000094441 11 1.962 1.000 0.962 - - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
14. xrra1 ENSDARG00000089578 18 1.913 - 0.913 - - - - 1.000 - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
15. lingo2 lingo2 67 1.908 - 0.976 - - - - 0.932 - -
16. zgc:158654 19 1.901 1.000 - - - - - 0.901 - - zgc:158654, transcript variant X1
17. ttll2 ENSDARG00000077853 9 1.896 - 0.896 - - - 1.000 - - - tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
18. npas4a ENSDARG00000055752 5 1.891 - - - - - - 1.000 0.891 - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
19. zgc:171220 ENSDARG00000102959 164 1.884 - 0.978 - - - 0.906 - - - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
20. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.879 - 0.978 - - - 0.901 - - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
21. KCNG2 ENSDARG00000035961 58 1.874 - - - - - 0.975 - - 0.899 potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
22. SCARB2 SCARB2 24 1.872 - - 0.918 - - 0.954 - - -
23. nkx1.2la ENSDARG00000006350 76 1.871 - - - - - - 1.000 - 0.871 NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
24. FMNL1 FMNL1 7 1.865 - - - - - 0.957 - 0.908 -
25. wu:fd60c08 wu:fd60c08 35 1.862 - - - - - 0.862 1.000 - -
26. MAP3K2 ENSDARG00000062884 34 1.86 0.860 - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
27. ntn1b ENSDARG00000022531 248 1.859 0.893 - - - - - 0.966 - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
28. pyyb ENSDARG00000035832 18 1.849 1.000 - - - - - 0.849 - - peptide YYb [Source:ZFIN;Acc:ZDB-GENE-060215-2]
29. arhgap19 ENSDARG00000083189 210 1.832 - 0.980 - - - - 0.852 - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
30. si:dkey-239j18.3 ENSDARG00000089806 12918 1.816 - - - - - - 1.000 0.816 - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
31. RIBC2 ENSDARG00000075177 445 1.812 - 0.924 - - - - 0.888 - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
32. C6H22orf23 C6H22orf23 15 1.809 - - - 0.809 - - 1.000 - -
33. st6galnac ENSDARG00000086292 29 1.803 0.825 0.978 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
34. zeb1a ENSDARG00000016788 48 1.796 - 0.796 - - - - 1.000 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
35. DHDH DHDH 15 1.795 - - - 0.795 - 1.000 - - -
36. cth1 ENSDARG00000057328 13 1.795 0.825 - - - - - - - 0.970 cysteine three histidine 1 [Source:ZFIN;Acc:ZDB-GENE-990806-20]
37. sfi1 ENSDARG00000053992 1075 1.79 0.872 0.918 - - - - - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
38. si:dkey-45k15.1 ENSDARG00000061714 32 1.787 - 0.978 - 0.809 - - - - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
39. tmprss4b ENSDARG00000012860 6 1.787 - 0.978 - 0.809 - - - - - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
40. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 1.783 0.946 0.837 - - - - - - -
41. trpc1 ENSDARG00000061203 62 1.782 - - - - - 0.949 0.833 - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
42. BX469915.2 BX469915.2 48 1.779 1.000 - - - - - 0.779 - -
43. irf9 ENSDARG00000016457 152 1.77 - 0.825 - - - 0.945 - - - interferon regulatory factor 9 [Source:ZFIN;Acc:ZDB-GENE-040912-165]
44. esm1 ENSDARG00000104370 186 1.77 0.912 - - - - - - - 0.858 endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
45. CABZ01030107.1 ENSDARG00000058631 52 1.769 0.895 - - - - - - - 0.874
46. si:ch73-389b16.2 ENSDARG00000103802 340 1.764 0.860 - - - - - 0.904 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
47. chrna6 ENSDARG00000055559 60 1.763 0.825 - - - - - 0.938 - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
48. HIST1H2BA ENSDARG00000116654 10 1.76 - - - 0.760 - - - 1.000 - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
49. si:ch211-260b17.6 32 1.755 - - 0.767 - - 0.988 - - - si:ch211-260b17.6
50. PLCXD1_2 PLCXD1_2 9 1.751 - - - - - - 1.000 0.751 -
51. rxfp3.3a3 ENSDARG00000069246 5 1.75 - 0.978 0.772 - - - - - - relaxin family peptide receptor 3.3a3 [Source:ZFIN;Acc:ZDB-GENE-050419-246]
52. MTBP ENSDARG00000090447 174 1.746 - - - - - 0.855 0.891 - - MDM2 binding protein [Source:ZFIN;Acc:ZDB-GENE-120724-1]
53. ENSDARG00000091313 ENSDARG00000091313 6 1.739 - - 0.772 - - - - - 0.967
54. ZNF135_5 ZNF135_5 73 1.738 - 0.809 - - - 0.929 - - -
55. crfb2 ENSDARG00000040332, ENSDARG00000109306, ENSDARG00000116866 21 1.736 - - - - - 0.957 0.779 - - cytokine receptor family member b2 [Source:ZFIN;Acc:ZDB-GENE-070905-2]
56. si:dkey-20j10.2 si:dkey-20j10.2 8 1.734 - - 0.734 - - - 1.000 - -
57. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 1.733 - 0.978 0.755 - - - - - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
58. GMIP ENSDARG00000077249 43 1.728 1.000 - - - - - 0.728 - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
59. MSMP ENSDARG00000105581 254 1.725 0.867 - - - - - 0.858 - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
60. kif19 ENSDARG00000053026 124 1.721 0.869 - - - - - 0.852 - - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
61. SLC2A13 SLC2A13 74 1.715 - 0.992 - - - - 0.723 - -
62. slitrk2 ENSDARG00000006636 40 1.707 - - - - - - 0.929 - 0.778 SLIT and NTRK-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-080327-7]
63. nek8 ENSDARG00000045626, ENSDARG00000117017 67 1.703 - - - - - 0.924 0.779 - - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
64. sprn ENSDARG00000056004 128 1.689 0.895 - - - - - 0.794 - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
65. WDR93 ENSDARG00000087191 51 1.689 - 0.883 - - - - 0.806 - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
66. zbtb3 ENSDARG00000036235 155 1.685 0.866 0.819 - - - - - - - zinc finger and BTB domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050506-105]
67. C11H1orf158 C11H1orf158 133 1.672 0.813 - - - - - 0.859 - -
68. CABZ01021538.1 CABZ01021538.1 67 1.665 0.824 - - - - - 0.841 - -
69. nlgn3a ENSDARG00000104786 91 1.662 - - - - - - 0.941 - 0.721 neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
70. fam193a ENSDARG00000102787 617 1.66 - 0.786 - - - 0.874 - - - family with sequence similarity 193, member A [Source:ZFIN;Acc:ZDB-GENE-080917-25]
71. si:dkey-260c8.4 si:dkey-260c8.4 106 1.651 - 0.820 - - - - - - 0.831
72. CCHCR1 CCHCR1 238 1.633 - - - - - 0.748 0.885 - -
73. si:ch211-209j10.6 ENSDARG00000093317 126 1.629 - 0.894 - - - 0.735 - - - si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
74. CU638868.1 ENSDARG00000115797 487 1.628 - 0.761 - - - 0.867 - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
75. PRR5L PRR5L 408 1.627 0.824 - - - - - - - 0.803
76. her8.2 ENSDARG00000069675 315 1.626 - 0.798 - - - - 0.828 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
77. vox ENSDARG00000099761 801 1.616 - 0.812 - - - 0.804 - - - ventral homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-1]
78. prkx ENSDARG00000060716 530 1.605 - 0.828 - - - 0.777 - - - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
79. CU658147.1 CU658147.1 69 1.605 0.751 - - - - - 0.854 - -
80. adam8b ENSDARG00000057644 108 1.599 - 0.835 - - - - - - 0.764 ADAM metallopeptidase domain 8b [Source:ZFIN;Acc:ZDB-GENE-070808-1]
81. alkbh3 ENSDARG00000045606, ENSDARG00000097208 169 1.599 - 0.897 - - 0.702 - - - - alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-040801-254]
82. slc31a2 ENSDARG00000076092 251 1.597 - - - - - 0.877 - 0.720 - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]
83. HMGXB4 HMGXB4 209 1.596 - 0.890 - - - - 0.706 - -
84. kifap3a ENSDARG00000008639 721 1.59 - - - - - 0.737 0.853 - - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
85. skap2 ENSDARG00000000906 146 1.589 0.724 - - - - 0.865 - - - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
86. gnb5b ENSDARG00000055377 98 1.589 - - - - - 0.716 0.873 - - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
87. WWC1 ENSDARG00000076041 26 1.586 - 0.859 - - - - - 0.727 - WW and C2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091118-8]
88. gucy1b3 92 1.585 0.705 - - - - 0.880 - - - guanylate cyclase 1, soluble, beta 3
89. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.575 0.786 - - - - - 0.789 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
90. foxj2 ENSDARG00000057680 73 1.574 - 0.846 - - - - - - 0.728 forkhead box J2 [Source:ZFIN;Acc:ZDB-GENE-100922-240]
91. MAP4K2 ENSDARG00000001234 39 1.565 - 0.861 - - - - 0.704 - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
92. enthd2 481 1.561 - 0.806 - - - - - - 0.755 ENTH domain containing 2
93. clu ENSDARG00000010434 498 1.549 0.799 - - - - - 0.750 - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
94. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.539 0.729 0.810 - - - - - - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
95. zgc:173770 ENSDARG00000076476 34 1.533 - 0.824 - 0.709 - - - - - zgc:173770 [Source:ZFIN;Acc:ZDB-GENE-070822-29]
96. RNF208 ENSDARG00000078056 60 1.522 0.728 - - - - - 0.794 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
97. inpp5e ENSDARG00000103926 567 1.517 - 0.776 - - - - - - 0.741 inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
98. si:ch211-162i8.2 ENSDARG00000096041 4 1.514 - - 0.705 0.809 - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
99. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1.508 - - - - - - 0.726 0.782 - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
100. scg2a 800 1.501 0.731 - - - - - 0.770 - - secretogranin II (chromogranin C) a

There are 1664 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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