Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-218d20.13

Gene Name Gene ID Reads Annotation
si:ch211-218d20.13 si:ch211-218d20.13 5488










Genes with expression patterns similar to si:ch211-218d20.13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-218d20.13 si:ch211-218d20.13 5488 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. fam135a ENSDARG00000059843 2352 2.453 - - - - - - 0.793 0.832 0.828 family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
3. BX649554.3_1 BX649554.3_1 1071 2.405 0.719 - 0.861 - - - - 0.825 -
4. CYP27A1_1 CYP27A1_1 329 2.347 0.706 - 0.859 - - - 0.782 - -
5. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 2.311 - 0.706 0.856 - - - 0.749 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
6. CR382298.2 CR382298.2 1083 2.166 - 0.732 0.723 - - - 0.711 - -
7. snx27a ENSDARG00000033804 2249 1.774 - 0.902 - - - - - 0.872 - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
8. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.766 - - - - - 0.792 - - 0.974 enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
9. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 1.718 - - 0.847 - - - - 0.871 - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
10. acin1b ENSDARG00000026842 3806 1.715 - - 0.889 - - - - - 0.826 apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
11. cenpl ENSDARG00000038802 696 1.661 - - - - - - 0.784 0.877 - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
12. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.66 - - 0.833 - - - - - 0.827 proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
13. stox2a ENSDARG00000070162 1620 1.656 - - - - - - 0.775 0.881 - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
14. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 1.652 - - 0.796 - - - - 0.856 - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
15. CCDC167 ENSDARG00000045850 1024 1.651 - - 0.798 - - - - 0.853 - coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
16. rnaseka ENSDARG00000069461 10304 1.639 - - - - - 0.775 - 0.864 - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
17. tfap2c ENSDARG00000040606 4628 1.631 - - 0.718 - - - - 0.913 - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
18. cc2d2a ENSDARG00000090971 363 1.628 0.801 - 0.827 - - - - - - coiled-coil and C2 domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2291]
19. ndrg2 ENSDARG00000011170 11442 1.623 - - - - - - - 0.823 0.800 NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
20. hnrnpua ENSDARG00000015206 4012 1.618 - - - - - 0.791 - - 0.827 heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
21. sorbs1 ENSDARG00000103435 2297 1.618 - - - - - 0.790 - - 0.828 sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
22. atp10a ENSDARG00000061039, ENSDARG00000110280 869 1.616 - 0.759 0.857 - - - - - - ATPase phospholipid transporting 10A [Source:ZFIN;Acc:ZDB-GENE-101102-1]
23. arpc1a ENSDARG00000008383 7353 1.607 - 0.738 - - - - - 0.869 - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
24. arap3 ENSDARG00000076801 725 1.607 - 0.754 - - - - - 0.853 - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
25. dusp7 ENSDARG00000101413 1307 1.606 0.776 - - - - - - 0.830 - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
26. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 1.603 - 0.811 - - - 0.792 - - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
27. letm2 ENSDARG00000077515 9561 1.596 - 0.729 - - - - - 0.867 - leucine zipper-EF-hand containing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-090521-4]
28. lepre1 lepre1 5346 1.588 - 0.705 - - - - - 0.883 -
29. uba5 ENSDARG00000063588 1260 1.588 0.743 - - - - - - 0.845 - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
30. hoxb10a ENSDARG00000011579 2135 1.583 - - - - - - 0.713 0.870 - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
31. rab5if ENSDARG00000074790 8807 1.582 - 0.752 - - - - - 0.830 - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
32. C19H1orf51 C19H1orf51 1776 1.581 - 0.746 - - - - 0.835 - -
33. lztfl1 ENSDARG00000105010 1697 1.58 - - - - - - 0.728 0.852 - leucine zipper transcription factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-945]
34. zfp36l1b ENSDARG00000021443 2974 1.58 - - - - - 0.780 0.800 - - zinc finger protein 36, C3H type-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2391]
35. cplx2 ENSDARG00000061918, ENSDARG00000111920 3673 1.576 - - - - - 0.763 - 0.813 - complexin 2 [Source:ZFIN;Acc:ZDB-GENE-081113-1]
36. atp13a atp13a 2867 1.572 - - 0.744 - - - - - 0.828
37. stx2b ENSDARG00000068217 2567 1.572 - 0.745 - - - - - - 0.827 syntaxin 2b [Source:ZFIN;Acc:ZDB-GENE-091204-424]
38. ap1s1 ENSDARG00000056803 3854 1.568 - 0.718 0.850 - - - - - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
39. amotl2a ENSDARG00000061923 4713 1.567 - 0.746 - - - - - - 0.821 angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
40. ska3 ENSDARG00000069917, ENSDARG00000114978 497 1.565 - - - - - 0.793 0.772 - - spindle and kinetochore associated complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2997]
41. mbd3a ENSDARG00000061774 4047 1.565 - 0.780 - - - - - 0.785 - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
42. sp3a ENSDARG00000001549 1994 1.564 - 0.733 0.831 - - - - - - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
43. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.564 - 0.781 - - - 0.783 - - - zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
44. slc7a6os ENSDARG00000010596 1599 1.563 - 0.722 - - - - - 0.841 - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
45. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.561 - 0.794 - - - - 0.767 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
46. zc3h15 ENSDARG00000015889 3861 1.56 - - 0.734 - - - - - 0.826 zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
47. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 1.557 - 0.824 - - - - 0.733 - - HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
48. sema3ab ENSDARG00000042210, ENSDARG00000110306 2178 1.553 - - 0.760 - - - - 0.793 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab [Source:ZFIN;Acc:ZDB-GENE-991209-6]
49. pho ENSDARG00000035133 670 1.549 - 0.702 0.847 - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
50. sdc4 ENSDARG00000059906 10105 1.549 - 0.830 - - - 0.719 - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
51. mrps33 ENSDARG00000020015 3551 1.548 - - - - - - 0.722 - 0.826 mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
52. Mar-02 Mar-02 1812 1.547 - 0.715 0.832 - - - - - -
53. VPS37B_1 VPS37B_1 1816 1.546 - 0.741 0.805 - - - - - -
54. agfg1b ENSDARG00000019526 472 1.546 - - 0.836 - - - 0.710 - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
55. Sep-06 Sep-06 5465 1.542 - 0.748 - - - - 0.794 - -
56. ift46 ENSDARG00000011240 2499 1.539 - - - - 0.705 - 0.834 - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
57. si:ch211-202h22.8 ENSDARG00000078138 670 1.537 - 0.706 0.831 - - - - - - si:ch211-202h22.8 [Source:ZFIN;Acc:ZDB-GENE-090313-78]
58. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.535 - - 0.826 - - - 0.709 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
59. ints1 ENSDARG00000100419 1958 1.533 - 0.732 - - - - 0.801 - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
60. sema3ga ENSDARG00000042545 1603 1.531 - 0.703 - - - - - - 0.828 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
61. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 1.53 - 0.719 0.811 - - - - - - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
62. eif3c ENSDARG00000016443 18003 1.526 - - - - - 0.747 - - 0.779 eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
63. rtn2a ENSDARG00000016088 12184 1.52 - - - - - 0.731 - - 0.789 reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
64. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.514 - - 0.786 - - - 0.728 - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
65. GABARAP GABARAP 8341 1.514 - 0.745 - - - - 0.769 - -
66. ost4 ENSDARG00000096118 7679 1.508 - - - - - 0.755 - 0.753 - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
67. pitpnbl ENSDARG00000015310, ENSDARG00000110980 3266 1.507 - 0.724 - - - - 0.783 - - phosphatidylinositol transfer protein, beta, like [Source:ZFIN;Acc:ZDB-GENE-040426-2791]
68. hoxc11a ENSDARG00000070351 1783 1.506 - - 0.717 - - 0.789 - - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
69. TTL ENSDARG00000062418 3043 1.504 - 0.787 - - - - 0.717 - - tubulin tyrosine ligase [Source:ZFIN;Acc:ZDB-GENE-060929-608]
70. mrps25 ENSDARG00000041306 3654 1.494 - - 0.793 - - - 0.701 - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
71. si:ch211-102c2.8 ENSDARG00000093823 168 1.494 0.745 - - - - - 0.749 - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
72. nr2f6a ENSDARG00000003607 4779 1.494 - - 0.725 - - 0.769 - - - nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
73. fam171a1 ENSDARG00000079788 1445 1.492 - 0.779 - - - - 0.713 - - family with sequence similarity 171, member A1 [Source:ZFIN;Acc:ZDB-GENE-061208-1]
74. si:dkey-39a18.1 ENSDARG00000045669 599 1.491 - 0.715 - - - - 0.776 - - si:dkey-39a18.1 [Source:ZFIN;Acc:ZDB-GENE-041210-127]
75. ccdc151 ENSDARG00000062978, ENSDARG00000113033 316 1.489 0.762 - - - - - 0.727 - - coiled-coil domain containing 151 [Source:ZFIN;Acc:ZDB-GENE-061013-787]
76. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.486 - 0.708 - - - - 0.778 - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
77. AL954146.5 AL954146.5 202 1.482 0.717 - - - - - 0.765 - -
78. esd ENSDARG00000019496 3192 1.48 - 0.747 0.733 - - - - - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
79. zgc:66475 ENSDARG00000099519 1348 1.477 - 0.747 0.730 - - - - - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
80. foxp1b ENSDARG00000014181 2594 1.468 - 0.767 - - - - 0.701 - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
81. tpm4b ENSDARG00000019128 450 1.457 0.728 - - - - - 0.729 - - tropomyosin 4b [Source:ZFIN;Acc:ZDB-GENE-030131-2964]
82. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 1.446 - - 0.710 - - - - 0.736 - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
83. cnp_1 ENSDARG00000070822 249 1.445 - 0.712 - - - - 0.733 - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
84. ppp2r1a ppp2r1a 11291 1.444 - 0.722 - - - - 0.722 - -
85. rassf9 ENSDARG00000074721 448 1.433 0.732 - - - - - 0.701 - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
86. cacybp ENSDARG00000014731 2650 1.427 - 0.703 0.724 - - - - - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
87. exosc1 ENSDARG00000059841 6895 1.417 - 0.705 0.712 - - - - - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
88. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.415 - 0.711 - - - - - 0.704 - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
89. BX088708.1 BX088708.1 6503 1.403 0.701 - - - - - 0.702 - -
90. atp5j 4272 1.402 - 0.702 - - - - 0.700 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
91. mccc2 ENSDARG00000017571 5635 0.995 - - - - - 0.995 - - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
92. arid3b ENSDARG00000104034 16303 0.992 - - - - - 0.992 - - - AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
93. chd4b ENSDARG00000025789 14299 0.99 - - - - - 0.990 - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
94. BDP1 BDP1 2514 0.917 - - - - - - - 0.917 -
95. coro7 ENSDARG00000089616 2141 0.913 - - - - - - - 0.913 - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
96. COL13A1 1565 0.913 - - - - - - - 0.913 - collagen, type XIII, alpha 1, transcript variant X1
97. myo9b ENSDARG00000077410 1956 0.908 - - - - - - - 0.908 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
98. si:dkey-193b15.6 si:dkey-193b15.6 1340 0.903 - - - - - - - 0.903 -
99. gins1 ENSDARG00000007624 1421 0.899 - - - - - - - 0.899 - GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
100. bcar1 ENSDARG00000056525 6563 0.896 - - - - - - - 0.896 - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]

There are 1421 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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