Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-198c19.2

Gene Name Gene ID Reads Annotation
si:ch211-198c19.2 si:ch211-198c19.2 165










Genes with expression patterns similar to si:ch211-198c19.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198c19.2 si:ch211-198c19.2 165 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. igsf5 igsf5 85 2.79 - 1.000 - - - - 0.793 - 0.997
3. si:ch73-7i4.1 ENSDARG00000094554 771 1.954 - 1.000 - - - - - - 0.954 si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
4. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.919 0.919 1.000 - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
5. slc15a1a ENSDARG00000100315 23 1.898 - 1.000 - - - - - 0.898 - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
6. capsla ENSDARG00000103521 277 1.891 0.902 - - - - - - - 0.989 calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
7. MFAP4_7 MFAP4_7 43 1.874 0.874 1.000 - - - - - - -
8. ITPRIPL2 88 1.83 - 1.000 - - - - - 0.830 - inositol 1,4,5-trisphosphate receptor interacting protein like 2
9. cybb ENSDARG00000056615 177 1.829 - 1.000 - - - - - 0.829 - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
10. klhl42 ENSDARG00000006011 46 1.827 0.827 1.000 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
11. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1.814 - 1.000 - - - 0.814 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
12. fam5b fam5b 45 1.814 - 1.000 - - - 0.814 - - -
13. vip ENSDARG00000078247 10 1.814 - 1.000 - - - 0.814 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
14. fam43b ENSDARG00000070222 92 1.809 - 1.000 - - - - 0.809 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
15. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.793 - 1.000 - - - - 0.793 - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
16. mapk15 ENSDARG00000100822 157 1.784 - 0.887 - - - 0.897 - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
17. dnajb9a ENSDARG00000052072 578 1.779 0.794 - - - - - - - 0.985 DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
18. CABZ01021538.1 CABZ01021538.1 67 1.77 - 1.000 - - - - - 0.770 -
19. si:ch211-243a22.1 si:ch211-243a22.1 42 1.759 - 1.000 - - - - - 0.759 -
20. CU467888.1 CU467888.1 30 1.752 - 1.000 - - - 0.752 - - -
21. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1.746 - 1.000 0.746 - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
22. MFAP4_2 MFAP4_2 592 1.741 0.741 1.000 - - - - - - -
23. EXD1 ENSDARG00000098669 27 1.734 - 0.941 - - - - 0.793 - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
24. CABZ01007222.1 CABZ01007222.1 78 1.73 - 1.000 - - - 0.730 - - -
25. acot9.2 ENSDARG00000058390, ENSDARG00000113544 438 1.711 - - - - - - - 0.720 0.991 acyl-CoA thioesterase 9, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-051113-136]
26. CU915778.2 CU915778.2 194 1.707 0.827 0.880 - - - - - - -
27. CABZ01038313.1 CABZ01038313.1 79 1.706 - - - - - - 0.768 0.938 -
28. zgc:174160 484 1.698 - - - - - - - 0.711 0.987 zgc:174160, transcript variant X1
29. arf3a ENSDARG00000070539 29 1.697 - - - - - - 0.793 0.904 - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
30. CABZ01061873.1 CABZ01061873.1 51 1.694 - 0.880 - - - 0.814 - - -
31. UIMC1 200 1.683 0.869 - - - - 0.814 - - - ubiquitin interaction motif containing 1
32. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.683 0.827 - - - - - - 0.856 - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
33. si:ch211-121j5.2 si:ch211-121j5.2 86 1.679 - 0.865 - - - 0.814 - - -
34. tnr ENSDARG00000020771 20 1.672 - - - - - 0.786 - 0.886 - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
35. zgc:110130 ENSDARG00000039203 352 1.672 - 0.933 0.739 - - - - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
36. si:ch73-167f18.4 si:ch73-167f18.4 9 1.666 - - - - - 0.814 0.852 - -
37. efr3ba ENSDARG00000033516 19 1.638 - - - - - 0.814 0.824 - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
38. hoxd11a ENSDARG00000059267 521 1.626 0.702 - - - - - - - 0.924 homeobox D11a [Source:ZFIN;Acc:ZDB-GENE-990415-117]
39. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 1.625 0.734 - - - - - - 0.891 - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
40. cdk5r2b ENSDARG00000078671 20 1.623 - - - - - 0.814 0.809 - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
41. PLB1 PLB1 20 1.622 0.827 - - - - - - 0.795 -
42. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1.62 0.827 - - - - - 0.793 - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
43. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1.62 0.827 - - - - - 0.793 - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
44. zgc:110353 ENSDARG00000039443 80 1.62 0.827 - - - - - 0.793 - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
45. pih1d2 ENSDARG00000014849 389 1.618 0.809 - - - - - 0.809 - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
46. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.61 0.827 0.783 - - - - - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
47. si:dkey-208k4.1 si:dkey-208k4.1 15 1.607 - - - - - 0.814 0.793 - -
48. panx2 ENSDARG00000063019 3 1.607 - - - - - 0.814 0.793 - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
49. b3galnt2 ENSDARG00000046133 68 1.606 - 0.847 - - - 0.759 - - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
50. NBL1 428 1.576 - 0.813 0.763 - - - - - - neuroblastoma 1, DAN family BMP antagonist
51. trim23 ENSDARG00000069420 103 1.565 - - - - - - 0.716 0.849 - tripartite motif containing 23 [Source:ZFIN;Acc:ZDB-GENE-060929-804]
52. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1.542 0.728 - - - - 0.814 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
53. nupl2 ENSDARG00000029043 105 1.528 - - - - - 0.814 0.714 - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
54. ppp1r3da ENSDARG00000077513 109 1.527 0.779 - 0.748 - - - - - - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
55. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1.525 - - 0.732 - - - 0.793 - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
56. C18H15orf61 C18H15orf61 104 1.524 - - - - - - 0.734 0.790 -
57. nme5 ENSDARG00000041617 135 1.513 0.750 - - - - 0.763 - - - NME/NM23 family member 5 [Source:ZFIN;Acc:ZDB-GENE-040718-221]
58. si:ch211-67e16.4 ENSDARG00000086317 609 1.476 0.770 - - - - - 0.706 - - si:ch211-67e16.4 [Source:ZFIN;Acc:ZDB-GENE-070912-311]
59. TEKT4 ENSDARG00000028899 47 1.451 0.724 - 0.727 - - - - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
60. nlgn3a ENSDARG00000104786 91 1.447 0.707 0.740 - - - - - - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
61. SLC9A3R2 SLC9A3R2 55 1.424 - - - - - 0.713 - 0.711 -
62. rassf4 ENSDARG00000012460 43 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
63. FAXC FAXC 102 1 - 1.000 - - - - - - -
64. CT027800.1 CT027800.1 36 1 - 1.000 - - - - - - -
65. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - 1.000 - - - - - - -
66. LRRK1_1 LRRK1_1 11 1 - 1.000 - - - - - - -
67. SMARCA4 ENSDARG00000104339 48 1 - 1.000 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
68. olfm1a ENSDARG00000018270 107 1 - 1.000 - - - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
69. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 - 1.000 - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
70. arrb2a ENSDARG00000039215 5 1 - 1.000 - - - - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
71. si:ch211-188i4.4 5 1 - 1.000 - - - - - - - si:ch211-188i4.4, transcript variant X3
72. DUSP13 DUSP13 2 1 - 1.000 - - - - - - -
73. mettl25 ENSDARG00000045754 36 1 - 1.000 - - - - - - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
74. hbaa2 ENSDARG00000069735 10 1 - 1.000 - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
75. zgc:165627 zgc:165627 4 1 - 1.000 - - - - - - -
76. pcyox1 ENSDARG00000103052 20 1 - 1.000 - - - - - - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
77. urgcp ENSDARG00000036767 6 1 - 1.000 - - - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
78. scg2b ENSDARG00000038574 345 1 - 1.000 - - - - - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
79. CABZ01008480.1 CABZ01008480.1 0 1 - 1.000 - - - - - - -
80. zgc:152968 ENSDARG00000037002 6 1 - 1.000 - - - - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
81. ABCC6 ABCC6 5 1 - 1.000 - - - - - - -
82. TMEM57 TMEM57 260 1 - 1.000 - - - - - - -
83. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - 1.000 - - - - - - -
84. ODF2 ODF2 6 1 - 1.000 - - - - - - -
85. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
86. traf1 ENSDARG00000069482 50 1 - 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
87. CR626874.1 ENSDARG00000100141 55 1 - 1.000 - - - - - - -
88. si:ch211-239j9.1 ENSDARG00000096319 27 1 - 1.000 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
89. hsp70l_1 ENSDARG00000055723 72 1 - 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
90. zgc:153615 ENSDARG00000038981 105 1 - 1.000 - - - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
91. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1 - 1.000 - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
92. BX000703.2 BX000703.2 10 1 - 1.000 - - - - - - -
93. ccr6a ENSDARG00000087474 10 1 - 1.000 - - - - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
94. CU457778.2 ENSDARG00000109381 2 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100329258]
95. SNORD30 SNORD30 34 1 - 1.000 - - - - - - -
96. itih6 ENSDARG00000056037 3 1 - 1.000 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
97. pja2 ENSDARG00000100296 1 1 - 1.000 - - - - - - - praja ring finger ubiquitin ligase 2 [Source:ZFIN;Acc:ZDB-GENE-060526-337]
98. ca10b ENSDARG00000009568 8 1 - 1.000 - - - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
99. PCDH10 PCDH10 7 1 - 1.000 - - - - - - -
100. si:dkey-222h21.4 1 1 - 1.000 - - - - - - - si:dkey-222h21.4

There are 1494 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA