Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-191j22.3

Gene Name Gene ID Reads Annotation
si:ch211-191j22.3 ENSDARG00000095459 959 si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]










Genes with expression patterns similar to si:ch211-191j22.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-191j22.3 ENSDARG00000095459 959 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
2. ptpn23a ENSDARG00000070124 1206 2.68 - - - - - 0.920 0.773 - 0.987 protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
3. sra1 ENSDARG00000053619 2799 2.643 - 0.748 - - - 0.918 - - 0.977 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
4. nt5c1bb ENSDARG00000033742 1248 2.596 0.783 - - - - - 0.823 - 0.990 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
5. brd4 ENSDARG00000078904 5367 2.357 - - - - - 0.822 0.721 - 0.814 bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
6. tmem18 ENSDARG00000036704 1784 2.313 - - - - - 0.857 0.752 - 0.704 transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
7. si:ch211-193k19.1 ENSDARG00000035660 636 2.287 0.708 - - - - 0.875 0.704 - - si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
8. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.933 - - - - - 0.941 - - 0.992 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
9. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.822 - - - - - 0.839 - - 0.983
10. brox ENSDARG00000013659 1334 1.799 - - - - - 0.859 - - 0.940 BRO1 domain and CAAX motif containing [Source:ZFIN;Acc:ZDB-GENE-041114-137]
11. ndst2a ENSDARG00000086269 754 1.768 - - - - - - 0.777 - 0.991 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
12. ensab ENSDARG00000061644 2436 1.762 - - - - - 0.780 - - 0.982 endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
13. cdc20 ENSDARG00000100741 3264 1.756 - - - - - 0.910 0.846 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
14. nudt9 ENSDARG00000087927 1148 1.754 0.776 - - - - - - - 0.978 nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
15. gnb1b ENSDARG00000104372 1077 1.753 - - - - - - 0.765 - 0.988 guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
16. kmt2e ENSDARG00000007523 1851 1.744 0.850 - - - - 0.894 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
17. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.739 0.894 - - - - 0.845 - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
18. ef1 1343 1.712 - - - - - 0.725 - - 0.987 E74-like factor 1 (ets domain transcription factor), transcript variant X4
19. ppig ENSDARG00000044431 3427 1.711 - - - - - - 0.740 - 0.971 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
20. bcar1 ENSDARG00000056525 6563 1.71 - - - - - 0.855 0.855 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
21. map4k3a ENSDARG00000087742 771 1.708 0.723 - - - - - - - 0.985 mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
22. TRIO TRIO 1601 1.707 - - - - - - 0.728 - 0.979
23. cpla2 cpla2 1031 1.696 - 0.707 - - - - - - 0.989
24. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.691 - - - - - 0.873 - 0.818 - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
25. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 1.687 - 0.758 - - - 0.929 - - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
26. commd4 ENSDARG00000061946 3281 1.686 - 0.707 - - - - - - 0.979 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
27. capn2l ENSDARG00000034211, ENSDARG00000111153 3858 1.673 - - - 0.817 - - - - 0.856 calpain 2, (m/II) large subunit, like [Source:ZFIN;Acc:ZDB-GENE-050417-341]
28. zgc:100918 ENSDARG00000087243 5451 1.666 - - - - - 0.768 - - 0.898 zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
29. stxbp2 ENSDARG00000007603 1646 1.666 - - - - - 0.848 0.818 - - syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
30. tefb ENSDARG00000098103 370 1.649 - - - - - 0.902 0.747 - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
31. vps36 ENSDARG00000057021 636 1.646 0.830 - - - - 0.816 - - - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
32. afap1 ENSDARG00000055284 730 1.644 - - - - - 0.860 0.784 - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
33. smg7 ENSDARG00000060767 2759 1.637 - - - - - 0.823 0.814 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
34. frmd6 ENSDARG00000002332 2698 1.634 - - - - - 0.710 - - 0.924 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
35. magt1 ENSDARG00000058062 3903 1.624 - - - - - 0.875 0.749 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
36. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.617 - 0.744 - - - 0.873 - - - abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
37. PDXK PDXK 224 1.616 0.720 - - - - 0.896 - - -
38. exosc1 ENSDARG00000059841 6895 1.605 - 0.758 - - - - - - 0.847 exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
39. pef1 ENSDARG00000023989 3013 1.59 - - - - - 0.833 0.757 - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
40. klf2a ENSDARG00000042667, ENSDARG00000113441 588 1.589 - - - - - 0.835 0.754 - - Kruppel-like factor 2a [Source:ZFIN;Acc:ZDB-GENE-011109-1]
41. ptbp3 ENSDARG00000043757 6760 1.587 - - - - - - 0.718 - 0.869 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
42. si:dkey-169i5.4 ENSDARG00000077862 511 1.583 - 0.751 - - - 0.832 - - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
43. pcnxl3 pcnxl3 756 1.581 - 0.781 - - - - 0.800 - -
44. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.581 - 0.748 - - - 0.833 - - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
45. tmem170a ENSDARG00000056628, ENSDARG00000111549 737 1.58 - - - - - 0.854 0.726 - - transmembrane protein 170A [Source:ZFIN;Acc:ZDB-GENE-040426-1622]
46. nipa2 ENSDARG00000055912 1574 1.58 - - - - - 0.861 0.719 - - NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]
47. slc44a2 ENSDARG00000037059 1903 1.574 - - - - - 0.780 0.794 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
48. ankrd6b ENSDARG00000029370 429 1.561 - 0.708 - - - 0.853 - - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
49. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.56 - - - - - 0.845 0.715 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
50. coa5 ENSDARG00000094833 1988 1.547 - - - - - 0.771 0.776 - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
51. elovl6l ENSDARG00000038639 1184 1.545 - - - - - 0.845 0.700 - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
52. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.542 - 0.720 - - - 0.822 - - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
53. LAMTOR4 ENSDARG00000045542 1181 1.533 - - - - - 0.792 0.741 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7438]
54. U2_6 U2_6 1155 1.531 - - - - - 0.809 0.722 - -
55. nufip2 ENSDARG00000069066 3965 1.527 - - - - - 0.710 - - 0.817 nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
56. si:dkeyp-104h9.5 ENSDARG00000073801 722 1.524 0.769 - - - - 0.755 - - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
57. prkar1aa ENSDARG00000076128 6565 1.507 - - - - - 0.734 0.773 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
58. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.499 - - - - - 0.745 0.754 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
59. adam17a ENSDARG00000043213 1305 1.497 - 0.787 - - - 0.710 - - - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
60. st13 ENSDARG00000021973 7787 1.491 - - - - - - 0.707 - 0.784 ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
61. itpkca ENSDARG00000002994 710 1.489 - - - - - 0.744 0.745 - - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
62. AIM1L AIM1L 899 1.475 0.712 - - - - 0.763 - - -
63. depdc5 ENSDARG00000078105 745 1.465 - 0.714 - - - - 0.751 - - DEP domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-091204-356]
64. lsm14aa ENSDARG00000006600 2298 1.465 - - - - - 0.724 0.741 - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
65. rab11fip1b ENSDARG00000036462 466 1.465 - - - - - 0.757 0.708 - - RAB11 family interacting protein 1 (class I) b [Source:ZFIN;Acc:ZDB-GENE-091204-322]
66. CU571162.1 CU571162.1 652 1.451 0.719 0.732 - - - - - - -
67. zdhhc16a ENSDARG00000007808 1080 1.45 - 0.721 - - - - 0.729 - - zinc finger, DHHC-type containing 16a [Source:ZFIN;Acc:ZDB-GENE-040426-1621]
68. bmp1a ENSDARG00000028071 583 1.445 - 0.704 - - - - 0.741 - - bone morphogenetic protein 1a [Source:ZFIN;Acc:ZDB-GENE-060818-1]
69. ovol1 1037 1.442 - - - - - 0.729 0.713 - - ovo-like zinc finger 1, transcript variant X1
70. xkrx ENSDARG00000044011 1788 1.44 - - - - - 0.710 0.730 - - XK related X-linked [Source:ZFIN;Acc:ZDB-GENE-041114-108]
71. nos2b ENSDARG00000031976 935 1.427 - - - - - 0.724 0.703 - - nitric oxide synthase 2b, inducible [Source:ZFIN;Acc:ZDB-GENE-080916-1]
72. CU695232.1 ENSDARG00000098286 1266 0.995 - - - - - - - - 0.995 zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
73. entpd2a.2 ENSDARG00000033953 389 0.995 - - - - - - - - 0.995 ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
74. etv2 ENSDARG00000053868 715 0.994 - - - - - - - - 0.994 ets variant 2 [Source:ZFIN;Acc:ZDB-GENE-050622-14]
75. ascc2 ENSDARG00000013058 228 0.994 - - - - - - - - 0.994 activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
76. PPP1R21 ENSDARG00000103144 385 0.993 - - - - - - - - 0.993 protein phosphatase 1, regulatory subunit 21 [Source:ZFIN;Acc:ZDB-GENE-041114-8]
77. si:ch73-109d9.1 ENSDARG00000052019 248 0.993 - - - - - - - - 0.993 si:ch73-109d9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-256]
78. nr1d4b ENSDARG00000059370 243 0.993 - - - - - - - - 0.993 nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
79. matn3b ENSDARG00000069265 856 0.993 - - - - - - - - 0.993 matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
80. CABZ01073417.1 CABZ01073417.1 232 0.993 - - - - - - - - 0.993
81. LRRC14B ENSDARG00000060788 363 0.993 - - - - - - - - 0.993 leucine rich repeat containing 14B [Source:ZFIN;Acc:ZDB-GENE-060503-910]
82. OTOS ENSDARG00000108475 180 0.993 - - - - - - - - 0.993 otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
83. NGEF ENSDARG00000076179 445 0.993 - - - - - - - - 0.993 neuronal guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-130530-794]
84. wdr66 ENSDARG00000059855 276 0.993 - - - - - - - - 0.993 WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
85. si:ch211-103e16.4 si:ch211-103e16.4 227 0.992 - - - - - - - - 0.992
86. KIF20B KIF20B 800 0.992 - - - - - - - - 0.992
87. lmo2 ENSDARG00000095019 1098 0.992 - - - - - - - - 0.992 LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
88. pcloa ENSDARG00000063299 353 0.992 - - - - - - - - 0.992 piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
89. ITPA ENSDARG00000057529 493 0.992 - - - - - - - - 0.992 inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
90. syt4 ENSDARG00000036505 421 0.992 - - - - - - - - 0.992 synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
91. plekhg5a ENSDARG00000025902 397 0.992 - - - - - - - - 0.992 pleckstrin homology domain containing, family G (with RhoGef domain) member 5a [Source:ZFIN;Acc:ZDB-GENE-060503-766]
92. tsc22d2 ENSDARG00000041839 1109 0.992 - - - - - - - - 0.992 TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
93. SURF2 ENSDARG00000112476 592 0.992 - - - - - - - - 0.992 surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
94. lace1a lace1a 561 0.992 - - - - - - - - 0.992
95. gsg1l ENSDARG00000037390 181 0.992 - - - - - - - - 0.992 gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
96. ccdc22 ENSDARG00000052379 2276 0.991 - - - - - - - - 0.991 coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
97. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 0.991 - - - - - - - - 0.991 RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
98. TCIRG1 TCIRG1 875 0.991 - - - - - - - - 0.991
99. SENP7 SENP7 1097 0.991 - - - - - - - - 0.991
100. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 0.991 - - - - - - - - 0.991 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]

There are 1295 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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