Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-132g1.3

Gene Name Gene ID Reads Annotation
si:ch211-132g1.3 ENSDARG00000089477 769 si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]










Genes with expression patterns similar to si:ch211-132g1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-132g1.3 ENSDARG00000089477 769 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
2. ARHGAP23 ARHGAP23 3946 2.619 - 0.886 - - 0.986 - - 0.747 -
3. QPCT ENSDARG00000089717 1383 2.564 - 0.877 - - - - - 0.765 0.922 glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
4. cry1a cry1a 738 2.337 - 0.716 - - - - - 0.791 0.830
5. pou2f1b ENSDARG00000007996 2172 1.912 - 0.918 - - 0.994 - - - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
6. tubg1 ENSDARG00000015610 2433 1.904 - 0.913 - - 0.991 - - - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
7. SRR SRR 544 1.904 - - - - 0.998 - - - 0.906
8. pargl ENSDARG00000101719 155 1.848 - 0.951 - - - - - 0.897 - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
9. uap1 ENSDARG00000052170 1168 1.829 - - - - 0.995 - - - 0.834 UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1233]
10. RNF38 ENSDARG00000062055 3901 1.798 - 0.808 - - 0.990 - - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
11. arid1aa ENSDARG00000101710 3644 1.779 - 0.881 - - 0.898 - - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
12. TRIM35_10 TRIM35_10 484 1.77 - 0.955 - - - - - - 0.815
13. ftsjd2 ftsjd2 2694 1.77 - 0.772 - - 0.998 - - - -
14. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 1.761 - 0.765 - - 0.996 - - - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
15. ribc1 ENSDARG00000055739 32 1.756 - - - - - - 0.834 - 0.922 RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
16. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.748 - - - 0.765 0.983 - - - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
17. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.744 - 0.934 - - - - - - 0.810 cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
18. ift140 ENSDARG00000031886 573 1.742 - - - - 0.998 - 0.744 - - intraflagellar transport 140 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040724-165]
19. si:dkey-202b22.6 ENSDARG00000045552 190 1.741 - - - - - - 0.885 0.856 - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
20. lmf2a ENSDARG00000078094 352 1.738 - 0.958 - - - - - 0.780 - lipase maturation factor 2a [Source:ZFIN;Acc:ZDB-GENE-080723-47]
21. loxl2b ENSDARG00000044074 1919 1.736 - 0.931 - - - - - - 0.805 lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
22. gpx1b ENSDARG00000006207 67 1.727 - - - - - - 0.836 0.891 - glutathione peroxidase 1b [Source:ZFIN;Acc:ZDB-GENE-040912-60]
23. zgc:174275 ENSDARG00000099845 172 1.716 - 0.954 - - - 0.762 - - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
24. CR759791.3 CR759791.3 134 1.709 - - - - - - - 0.840 0.869
25. lyn ENSDARG00000067916, ENSDARG00000107511 109 1.697 - 0.949 - - - - 0.748 - - LYN proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040912-7]
26. si:ch211-198b3.1 si:ch211-198b3.1 765 1.695 - 0.944 - - - - 0.751 - -
27. lias ENSDARG00000022845, ENSDARG00000112666 407 1.693 - 0.954 - - - - - 0.739 - lipoic acid synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1528]
28. aggf1 ENSDARG00000060109 574 1.687 - 0.937 - - - - 0.750 - - angiogenic factor with G patch and FHA domains 1 [Source:ZFIN;Acc:ZDB-GENE-060929-836]
29. ftr67 ENSDARG00000098820 611 1.685 - 0.928 - - - - 0.757 - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
30. rb1 ENSDARG00000006782 1445 1.682 - 0.912 - - - - - - 0.770 retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
31. BX890577.1 BX890577.1 257 1.678 - - - - - - 0.773 - 0.905
32. btr30 ENSDARG00000102591 506 1.676 - 0.932 - - - - - - 0.744 bloodthirsty-related gene family, member 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1407]
33. zdhhc6 ENSDARG00000075721 1494 1.676 - 0.963 - - - - - 0.713 - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
34. HEATR2_1 HEATR2_1 166 1.675 - - - - - - 0.794 - 0.881
35. tmem107l ENSDARG00000088398, ENSDARG00000109909 208 1.671 - - - - - - 0.796 - 0.875 transmembrane protein 107 like [Source:ZFIN;Acc:ZDB-GENE-090313-269]
36. CSGALNACT1 CSGALNACT1 116 1.662 - - 0.742 - - - - - 0.920
37. dnah5 ENSDARG00000087373 168 1.659 0.779 - - - - - - - 0.880 dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
38. ERCC6L2 ENSDARG00000012403 236 1.649 - - - - - - 0.786 0.863 - excision repair cross-complementation group 6-like 2 [Source:ZFIN;Acc:ZDB-GENE-110411-274]
39. BX649554.3_1 BX649554.3_1 1071 1.64 - - - - - 0.712 - - 0.928
40. slc12a4 ENSDARG00000014378 204 1.64 - - - - - - - 0.822 0.818 solute carrier family 12 (potassium/chloride transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-090218-27]
41. ecm2 ENSDARG00000071549 1527 1.638 - - - - - - - 0.801 0.837 extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
42. bcl7ba ENSDARG00000111877 3696 1.635 - 0.934 - - - - - 0.701 - BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
43. klhl23 ENSDARG00000078475 92 1.632 - - - 0.720 - - - - 0.912 kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
44. he2 945 1.618 - 0.753 - - - - - 0.865 - hatching enzyme 2
45. pcdh7a ENSDARG00000078898 174 1.617 - - - - - 0.802 - 0.815 - protocadherin 7a [Source:ZFIN;Acc:ZDB-GENE-120206-1]
46. zbtb7a ENSDARG00000039899 577 1.614 - 0.892 - - - - - - 0.722 zinc finger and BTB domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-050208-583]
47. LYRM9 ENSDARG00000075528 329 1.609 - - - - - - - 0.828 0.781 LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
48. ZNF710 ZNF710 766 1.609 - - - 0.782 - - 0.827 - -
49. ZNF70_2 ZNF70_2 1866 1.606 - 0.726 - - 0.880 - - - -
50. CU929219.1 CU929219.1 383 1.595 - - - - - - 0.704 0.891 -
51. slc25a15a ENSDARG00000063539 50 1.593 0.716 - - - - - - 0.877 - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
52. ltc4s ENSDARG00000062598 138 1.591 - - - - - 0.716 - 0.875 - leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
53. HSPB11 ENSDARG00000002204 170 1.586 - - - - - - 0.741 - 0.845 heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
54. immp1l ENSDARG00000045935 175 1.586 - - - - - - 0.723 0.863 - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]
55. rhov ENSDARG00000070434 808 1.582 - 0.786 - - - - - 0.796 - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
56. CR352229.2 CR352229.2 784 1.582 - - - - - 0.701 - - 0.881
57. nfkbiaa ENSDARG00000005481 948 1.579 - - - 0.773 - - - 0.806 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-2227]
58. brd1b ENSDARG00000051798 1712 1.571 - 0.806 - 0.765 - - - - - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
59. si:ch211-102c2.8 ENSDARG00000093823 168 1.559 - - - - - - 0.755 - 0.804 si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
60. wdr65 wdr65 251 1.556 - - - - - - 0.775 - 0.781
61. wtip ENSDARG00000103607 797 1.552 - - - - - 0.725 - 0.827 - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
62. pigk ENSDARG00000024479 1386 1.551 - - - - - 0.793 - 0.758 - phosphatidylinositol glycan anchor biosynthesis, class K [Source:ZFIN;Acc:ZDB-GENE-040625-162]
63. ccdc120 ENSDARG00000032856, ENSDARG00000114382 808 1.545 - - - 0.728 - - - - 0.817 coiled-coil domain containing 120 [Source:ZFIN;Acc:ZDB-GENE-061027-93]
64. stard13b ENSDARG00000098954 700 1.535 - - - 0.755 - - 0.780 - - StAR-related lipid transfer (START) domain containing 13b [Source:ZFIN;Acc:ZDB-GENE-050506-146]
65. ttc13 ENSDARG00000063242 1360 1.532 - 0.725 - - - - - - 0.807 tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
66. FP017169.3 FP017169.3 216 1.531 0.825 - - - - - 0.706 - -
67. CABZ01080370.1 CABZ01080370.1 58 1.527 0.721 - - - - - 0.806 - -
68. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.523 - 0.820 - - - - - 0.703 - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
69. ZNF784_3 ZNF784_3 44 1.522 0.785 - - - - 0.737 - - -
70. zgc:174906 ENSDARG00000075314 2187 1.517 - - - - 0.703 0.814 - - - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
71. xrcc4 ENSDARG00000010732 553 1.512 - - - - - - - 0.803 0.709 X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1755]
72. f2rl1.2 ENSDARG00000077540 822 1.507 - - - - - - - 0.793 0.714 coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
73. micall2a ENSDARG00000102366 173 1.499 - - - - - - 0.760 - 0.739 mical-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5409]
74. fam129ba ENSDARG00000062970 1578 1.493 - 0.777 - - - - - - 0.716 family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
75. noc3l ENSDARG00000002487 230 1.48 0.722 - - - - - 0.758 - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
76. herpud1 ENSDARG00000024314 1207 1.475 - 0.761 - - - - - 0.714 - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
77. zgc:113220 ENSDARG00000014775 235 1.47 - - 0.749 - - - - 0.721 - zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64]
78. tmem238 tmem238 1403 1.466 - 0.723 - - - - - - 0.743
79. itih5 ENSDARG00000045517 374 1.465 - - - - - - - 0.709 0.756 inter-alpha-trypsin inhibitor heavy chain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-193]
80. si:ch211-212g7.6 ENSDARG00000079369 707 1.46 - 0.732 - - - - - - 0.728 si:ch211-212g7.6 [Source:ZFIN;Acc:ZDB-GENE-030131-4695]
81. disp1 ENSDARG00000044417 603 1.46 - - - - - - - 0.704 0.756 dispatched homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030911-7]
82. zgc:112496 ENSDARG00000004274 1258 1.454 - - - - - - - 0.715 0.739 zgc:112496 [Source:ZFIN;Acc:ZDB-GENE-050320-25]
83. per1b ENSDARG00000012499 320 1.446 0.725 - - - - 0.721 - - - period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
84. snx15 ENSDARG00000020397, ENSDARG00000110059 491 1.446 - - - - - - 0.725 0.721 - sorting nexin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-1377]
85. rtkn2 rtkn2 1092 1.441 - - - 0.726 - - 0.715 - -
86. CABZ01005777.1 CABZ01005777.1 505 1.439 - - - 0.715 - - - - 0.724
87. tbc1d2b ENSDARG00000061986 247 1.434 - - - - - 0.711 - 0.723 - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
88. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.432 - - - 0.706 - - - 0.726 - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
89. mppe1 ENSDARG00000045416 340 1.41 - - - 0.706 - - - 0.704 - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
90. MEX3D MEX3D 293 0.999 - - - - 0.999 - - - -
91. e2f5 ENSDARG00000038812 388 0.999 - - - - 0.999 - - - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
92. CCDC106 CCDC106 1908 0.999 - - - - 0.999 - - - -
93. ZBTB22 ZBTB22 1053 0.999 - - - - 0.999 - - - -
94. rc3h1 rc3h1 1087 0.999 - - - - 0.999 - - - -
95. d2hgdh ENSDARG00000060210 362 0.999 - - - - 0.999 - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
96. TIMM21 ENSDARG00000071594 722 0.999 - - - - 0.999 - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
97. si:ch211-223a21.1 ENSDARG00000098892 306 0.999 - - - - 0.999 - - - - si:ch211-223a21.1 [Source:ZFIN;Acc:ZDB-GENE-110913-137]
98. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 0.999 - - - - 0.999 - - - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
99. rad50 ENSDARG00000038917 1105 0.998 - - - - 0.998 - - - - RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
100. asah1a ENSDARG00000037091, ENSDARG00000112187 390 0.998 - - - - 0.998 - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]

There are 1745 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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