Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-121j5.2

Gene Name Gene ID Reads Annotation
si:ch211-121j5.2 si:ch211-121j5.2 86










Genes with expression patterns similar to si:ch211-121j5.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-121j5.2 si:ch211-121j5.2 86 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. fam5b fam5b 45 2.755 - 0.865 - - - 1.000 0.890 - -
3. mapk15 ENSDARG00000100822 157 2.614 - 0.936 0.842 - - 0.836 - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
4. BX088711.1 BX088711.1 125 2.458 - 0.754 0.793 - - - 0.911 - -
5. TSPEAR TSPEAR 9 1.951 - - 0.951 - - 1.000 - - -
6. ENSDARG00000091446 ENSDARG00000091446 239 1.945 - - - - - 1.000 0.945 - -
7. si:dkey-208k4.1 si:dkey-208k4.1 15 1.94 - 0.940 - - - 1.000 - - -
8. vip ENSDARG00000078247 10 1.865 - 0.865 - - - 1.000 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
9. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1.865 - 0.865 - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
10. cenpi ENSDARG00000052565 482 1.838 - - - - - 0.922 0.916 - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
11. s100a1 ENSDARG00000015543 274 1.825 - 0.913 - - - - 0.912 - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
12. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1.813 - - - 0.813 - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
13. cdk5r1a ENSDARG00000037916 46 1.807 - 0.865 0.942 - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
14. slc38a6 ENSDARG00000054312 112 1.787 - - 0.922 - - - 0.865 - - solute carrier family 38, member 6 [Source:ZFIN;Acc:ZDB-GENE-050522-51]
15. CABZ01007222.1 CABZ01007222.1 78 1.773 - 0.865 - - - 0.908 - - -
16. UIMC1 200 1.772 0.772 - - - - 1.000 - - - ubiquitin interaction motif containing 1
17. stk16 ENSDARG00000037777 255 1.763 - - - - - 0.849 0.914 - - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
18. loxhd1b ENSDARG00000074638 6 1.761 - 0.761 - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
19. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1.76 0.760 - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
20. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.758 0.856 0.902 - - - - - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
21. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1.754 - 0.754 - - - 1.000 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
22. CABZ01061873.1 CABZ01061873.1 51 1.753 - 0.753 - - - 1.000 - - -
23. tapbp tapbp 70 1.748 - - 0.859 - - - 0.889 - -
24. akt3a_1 ENSDARG00000104810 12 1.726 - - - - - 1.000 - 0.726 - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
25. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1.726 - - - - - 1.000 - 0.726 - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
26. klhl42 ENSDARG00000006011 46 1.721 0.856 0.865 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
27. cacng2a ENSDARG00000032565 99 1.72 - 0.865 - - - 0.855 - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
28. fth1b ENSDARG00000007975 96 1.719 - - 0.893 0.826 - - - - - ferritin, heavy polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040912-30]
29. CABZ01073954.1 CABZ01073954.1 258 1.714 - 0.865 - - - 0.849 - - -
30. SNORD65 SNORD65 35 1.7 0.764 - 0.936 - - - - - -
31. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.694 0.856 - - - - 0.838 - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
32. si:ch211-198c19.2 si:ch211-198c19.2 165 1.679 - 0.865 - - - 0.814 - - -
33. siah2l ENSDARG00000044381 107 1.679 - - - 0.711 - - 0.968 - - seven in absentia homolog 2 (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-030922-1]
34. neu3.1 ENSDARG00000096382 9 1.674 - 0.865 - 0.809 - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
35. si:dkey-11c5.11 ENSDARG00000096637 130 1.669 0.771 - 0.898 - - - - - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
36. si:dkey-225k4.1 ENSDARG00000092045 47 1.668 - 0.865 - - - - 0.803 - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
37. si:dkey-161j23.7 ENSDARG00000092882 180 1.662 0.732 - - - - - 0.930 - - si:dkey-161j23.7 [Source:ZFIN;Acc:ZDB-GENE-091204-391]
38. TTBK1 TTBK1 120 1.66 - - - - - 0.712 0.948 - -
39. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.656 - - 0.900 - - 0.756 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
40. ZNF135_2 ZNF135_2 27 1.648 - 0.865 - 0.783 - - - - -
41. SHISA8 SHISA8 58 1.647 - - 0.860 0.787 - - - - -
42. BX465841.1 BX465841.1 47 1.645 0.783 - - 0.862 - - - - -
43. RUNDC1 ENSDARG00000091962 693 1.644 - - 0.745 - - - 0.899 - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
44. MFAP4_2 MFAP4_2 592 1.635 0.770 0.865 - - - - - - -
45. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.621 0.756 0.865 - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
46. dync2i1 dync2i1 83 1.611 - 0.748 0.863 - - - - - -
47. CU915778.2 CU915778.2 194 1.609 0.856 0.753 - - - - - - -
48. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.608 - 0.865 0.743 - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
49. si:dkeyp-69c1.9 ENSDARG00000091888 39 1.599 - 0.789 - 0.810 - - - - - si:dkeyp-69c1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1774]
50. MFAP4_7 MFAP4_7 43 1.597 0.732 0.865 - - - - - - -
51. rfc5 ENSDARG00000035634 974 1.595 - 0.743 - - - - 0.852 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
52. cygb1 ENSDARG00000099371 63 1.569 0.778 - 0.791 - - - - - - cytoglobin 1 [Source:ZFIN;Acc:ZDB-GENE-020513-1]
53. pknox2 ENSDARG00000055349 784 1.561 - 0.848 0.713 - - - - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
54. BX927351.1 ENSDARG00000096844 125 1.561 - - 0.700 - - - 0.861 - -
55. si:ch73-196i15.3 ENSDARG00000094281 1005 1.548 - 0.796 0.752 - - - - - - si:ch73-196i15.3 [Source:ZFIN;Acc:ZDB-GENE-091116-4]
56. rad18 ENSDARG00000027938 574 1.524 - 0.765 - - - - 0.759 - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
57. NCKAP1L ENSDARG00000075748 129 1.509 - - 0.745 - - - 0.764 - - NCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]
58. ntrk2a ENSDARG00000059897 185 1.507 - - 0.756 - - 0.751 - - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
59. shdb ENSDARG00000062109, ENSDARG00000111006 323 1.502 - - 0.728 - - 0.774 - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
60. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.485 - 0.753 0.732 - - - - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
61. BX936443.2 BX936443.2 28 1.473 - 0.749 - 0.724 - - - - -
62. si:ch211-10a23.2 ENSDARG00000060656 471 1.472 - - 0.737 - - 0.735 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
63. ttll1 ENSDARG00000090778 114 1.442 - - 0.734 - - 0.708 - - - tubulin tyrosine ligase-like family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1326]
64. C3H17orf75 C3H17orf75 432 1.432 - - 0.730 - - 0.702 - - -
65. grp ENSDARG00000043074 747 1.429 - - 0.711 - - - 0.718 - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
66. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
67. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
68. gltpb ENSDARG00000077962 5 1 - - - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
69. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
70. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - 1.000 - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
71. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
72. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
73. mstnb ENSDARG00000069133 3 1 - - - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
74. zgc:101765 ENSDARG00000054934, ENSDARG00000110184 49 1 - 1.000 - - - - - - - zgc:101765 [Source:ZFIN;Acc:ZDB-GENE-041010-156]
75. dre-mir-196c dre-mir-196c 2 1 - - - - - 1.000 - - -
76. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
77. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
78. si:ch211-202h22.10 ENSDARG00000087290 13 1 - - - - - 1.000 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
79. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
80. USF2 ENSDARG00000020228 3 1 - - - - - 1.000 - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
81. scpp8 ENSDARG00000093124 54 1 - - - - - 1.000 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
82. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
83. cdk5r2b ENSDARG00000078671 20 1 - - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
84. slc30a2 ENSDARG00000021305 4 1 - - - - - 1.000 - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
85. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - 1.000 - - -
86. mir124-1 10 1 - - - - - 1.000 - - - microRNA 124-1
87. cabp2b ENSDARG00000052277 119 1 - - - - - 1.000 - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
88. TENM2 ENSDARG00000037122 48 1 - - - - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
89. dapk2 dapk2 24 1 - - - - - 1.000 - - -
90. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
91. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
92. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1 - - - - - 1.000 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
93. si:rp71-84d19.2 si:rp71-84d19.2 34 1 - - - - - 1.000 - - -
94. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
95. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
96. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
97. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
98. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
99. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
100. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]

There are 1710 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA