Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-325m22.2

Gene Name Gene ID Reads Annotation
si:ch1073-325m22.2 ENSDARG00000095921 8534 si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]










Genes with expression patterns similar to si:ch1073-325m22.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-325m22.2 ENSDARG00000095921 8534 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
2. cox6b2 ENSDARG00000037860 33134 2.49 - - 0.800 - - 0.811 0.879 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
3. cox7c ENSDARG00000104537 12169 2.448 - - 0.716 - - 0.858 0.874 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
4. pdcd4a ENSDARG00000021702 7293 2.425 - 0.882 - - - 0.741 0.802 - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
5. atp5j 4272 2.406 - 0.740 - - - 0.750 0.916 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
6. nnt ENSDARG00000023536 7357 2.4 - 0.715 - - - 0.845 0.840 - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
7. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 2.387 - 0.849 - - - - 0.825 - 0.713 capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
8. atp5e 14858 2.383 0.721 - - - - - 0.888 - 0.774 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
9. chchd3 chchd3 4139 2.366 - 0.848 - - - 0.766 0.752 - -
10. ndufb11 ENSDARG00000043467 7495 2.354 0.700 - - - - 0.827 0.827 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
11. eif2s2 ENSDARG00000053047 15904 2.35 - - - - - 0.768 0.849 0.733 - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
12. atpif1b 8625 2.344 - - - - - 0.783 0.820 - 0.741 ATPase inhibitory factor 1b
13. eif3m ENSDARG00000013931 8117 2.331 - 0.830 - - - 0.725 0.776 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
14. ndufs3 ENSDARG00000015385 7790 2.286 - - - - - 0.827 - 0.704 0.755 NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
15. SNRPG ENSDARG00000099667 18697 2.265 - 0.814 - - - 0.724 0.727 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
16. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 2.264 - 0.707 - - - 0.727 0.830 - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
17. txn2 ENSDARG00000034777 4071 2.256 - 0.722 - - - - 0.797 - 0.737 thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
18. esd ENSDARG00000019496 3192 2.244 - 0.708 - - - 0.730 0.806 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
19. ncl1 2835 2.24 - 0.711 - - - 0.771 0.758 - - nicalin, transcript variant X3
20. pygmb ENSDARG00000013317 5454 2.24 - 0.798 - - - - 0.725 - 0.717 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
21. rreb1b ENSDARG00000042652 2731 2.239 - 0.733 - - - 0.701 0.805 - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
22. cyc1 ENSDARG00000038075 16699 2.233 0.704 - - - - 0.785 0.744 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
23. oxct1a ENSDARG00000013063 1517 2.232 - - 0.717 - - 0.765 0.750 - - 3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]
24. snoU83B snoU83B 4666 2.223 - - 0.716 - - 0.726 0.781 - -
25. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 2.202 - 0.750 - - - 0.703 0.749 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
26. higd2a ENSDARG00000052371 7354 2.186 - 0.754 - - - 0.722 0.710 - - HIG1 hypoxia inducible domain family, member 2A [Source:ZFIN;Acc:ZDB-GENE-050417-119]
27. pno1 ENSDARG00000008502 4547 2.178 - 0.729 - - - 0.729 0.720 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
28. tnnc1b ENSDARG00000037539 13945 2.177 - 0.727 - - - 0.728 0.722 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
29. zgc:193541 ENSDARG00000092873 21276 1.797 - - - - - 0.884 0.913 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
30. ndufs6 ENSDARG00000056583 7220 1.697 - - - - - 0.848 0.849 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
31. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.686 - - - - - 0.873 0.813 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
32. edf1 ENSDARG00000009950 10518 1.671 - 0.890 - - - 0.781 - - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
33. fam46ba 4575 1.661 - 0.858 - - - - 0.803 - - family with sequence similarity 46, member Ba
34. USMG5 USMG5 10356 1.65 - 0.794 - - - - 0.856 - -
35. ndufa1 ENSDARG00000036329, ENSDARG00000111888 18361 1.648 - - - - - 0.883 0.765 - - NADH:ubiquinone oxidoreductase subunit A1 [Source:ZFIN;Acc:ZDB-GENE-040625-168]
36. col5a2a ENSDARG00000031678 7743 1.639 - 0.819 - - - 0.820 - - - collagen, type V, alpha 2a [Source:ZFIN;Acc:ZDB-GENE-030616-13]
37. ilk ENSDARG00000056964 6686 1.635 - - - - - 0.732 0.903 - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
38. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.631 - - - - - 0.812 0.819 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
39. slc39a7 ENSDARG00000104451 6368 1.627 - 0.792 - - - - 0.835 - - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
40. atpif1a 6030 1.62 - - - - - 0.846 0.774 - - ATPase inhibitory factor 1a
41. cox6c ENSDARG00000038577 16845 1.613 - - - - - 0.788 0.825 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
42. rhebl1 ENSDARG00000039162 3966 1.613 - 0.878 - - - - 0.735 - - Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
43. mdh2 ENSDARG00000043371 14485 1.612 - - - - - - 0.849 - 0.763 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
44. ube2v2 ENSDARG00000028198 23341 1.611 - - - - - 0.719 0.892 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
45. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.61 - - - - - - 0.855 0.755 - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
46. slmo2 slmo2 5559 1.609 - 0.773 - - - 0.836 - - -
47. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.604 - - - - - 0.770 0.834 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
48. eef1db ENSDARG00000030053 5185 1.602 - - - - - 0.706 0.896 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
49. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.6 - - - - - 0.754 0.846 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
50. col11a1b ENSDARG00000009014 9998 1.597 - 0.744 - - - - 0.853 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
51. ndufa11 ENSDARG00000042777 2757 1.596 - 0.808 - - - - 0.788 - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
52. pomp ENSDARG00000032296 4439 1.596 - 0.792 - - - - 0.804 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
53. eif2s1b ENSDARG00000052178 11961 1.591 - - - - - 0.759 0.832 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
54. AKAP2 AKAP2 4178 1.591 - - - - - 0.743 0.848 - -
55. rps25 ENSDARG00000041811 52182 1.584 - - - - - 0.832 0.752 - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
56. eif3ha ENSDARG00000102452 9238 1.583 - - - - - 0.750 0.833 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
57. ndufb9 ENSDARG00000041314, ENSDARG00000112557 15434 1.582 - - - - - 0.829 - - 0.753 NADH:ubiquinone oxidoreductase subunit B9 [Source:ZFIN;Acc:ZDB-GENE-030131-8364]
58. UQCC2 ENSDARG00000011272 1337 1.578 - - - - - 0.778 0.800 - - ubiquinol-cytochrome c reductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1726]
59. cox7a2a ENSDARG00000053217 12564 1.576 - - - - - 0.803 - - 0.773 cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
60. uqcrc2a ENSDARG00000014794 3949 1.576 - 0.767 - - - - 0.809 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
61. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.576 - 0.710 - - - - 0.866 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
62. acsl1 acsl1 4216 1.576 - - - - - 0.777 0.799 - -
63. immt ENSDARG00000102874 3435 1.575 - - - - - 0.774 0.801 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
64. acap3a ENSDARG00000075990 9652 1.575 - - - - - 0.753 0.822 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
65. mt-nd4l ENSDARG00000063916 2229 1.574 - - - - - 0.765 0.809 - - NADH dehydrogenase 4L, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-11]
66. KIAA0355 3250 1.573 - - - - - 0.829 0.744 - - KIAA0355 ortholog, transcript variant X1
67. mrpl28 ENSDARG00000057805, ENSDARG00000109307, ENSDARG00000115867 1325 1.572 - - - - - 0.777 0.795 - - mitochondrial ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-050522-113]
68. myef2 ENSDARG00000059398 6050 1.572 - 0.859 - - - - 0.713 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
69. eif4h ENSDARG00000042252 6742 1.568 - 0.787 - - - - 0.781 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
70. eif3g ENSDARG00000016889 10367 1.567 - - - - - 0.749 0.818 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
71. acadvl ENSDARG00000016687 5329 1.566 - - - - - 0.764 0.802 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
72. idh3a ENSDARG00000030278 2983 1.564 - 0.834 - - - - 0.730 - - isocitrate dehydrogenase 3 (NAD+) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1007]
73. hadhb ENSDARG00000102055 9700 1.564 0.766 - - - - - 0.798 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
74. SERBP1 SERBP1 9276 1.56 - 0.856 - - - - 0.704 - -
75. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 1.558 - 0.769 - - - - 0.789 - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
76. lrpprc ENSDARG00000043970 3847 1.554 - 0.759 - - - - 0.795 - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
77. atp5d 20825 1.552 - 0.738 - - - 0.814 - - - ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
78. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.549 - - - - - 0.714 0.835 - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
79. sucla2 ENSDARG00000005359 5992 1.549 - 0.801 - - - 0.748 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
80. osbpl2a ENSDARG00000053804 1883 1.546 - 0.798 - - - - 0.748 - - oxysterol binding protein-like 2a [Source:ZFIN;Acc:ZDB-GENE-091116-46]
81. mrps33 ENSDARG00000020015 3551 1.546 - 0.742 - - - - 0.804 - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
82. stau2 ENSDARG00000026801, ENSDARG00000112268 5161 1.546 - 0.757 - - - - 0.789 - - staufen double-stranded RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-687]
83. uqcrfs1_1 ENSDARG00000007745 2687 1.546 - - - - - 0.813 - - 0.733 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
84. slc25a12 ENSDARG00000102362 2773 1.542 - 0.773 - - - - 0.769 - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
85. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 1.542 0.712 - - - - 0.830 - - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
86. rab5if ENSDARG00000074790 8807 1.542 - 0.726 - - - - 0.816 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
87. hadhab ENSDARG00000060594 3664 1.54 - - - - - 0.778 0.762 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
88. phb ENSDARG00000057414 9551 1.54 - - - - - - 0.828 - 0.712 prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
89. gps1 ENSDARG00000040650 3893 1.54 - 0.789 - - - 0.751 - - - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
90. nop56 ENSDARG00000012820 15231 1.539 - 0.764 - - - 0.775 - - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
91. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.535 - 0.738 - - - - 0.797 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
92. dcn ENSDARG00000012066 6182 1.532 - - - - - 0.756 0.776 - - decorin [Source:ZFIN;Acc:ZDB-GENE-010102-1]
93. pcmt ENSDARG00000015201 5132 1.532 - 0.709 - - - - 0.823 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
94. si:dkey-82i20.5 ENSDARG00000116717 2965 1.53 - 0.797 - - - 0.733 - - - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
95. nars ENSDARG00000061100 2948 1.527 - 0.768 - - - - 0.759 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
96. COX20 ENSDARG00000099997 1451 1.527 - 0.733 - - - - 0.794 - - cytochrome c oxidase assembly factor COX20 [Source:ZFIN;Acc:ZDB-GENE-040718-467]
97. fat1 fat1 3934 1.524 - 0.722 - - - - 0.802 - -
98. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 1.524 - - - - - 0.714 0.810 - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
99. grpel1 ENSDARG00000010021 3055 1.523 - 0.752 - - - - 0.771 - - GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]
100. larp4aa ENSDARG00000078401 2526 1.523 - 0.759 - - - 0.764 - - - La ribonucleoprotein domain family, member 4Aa [Source:ZFIN;Acc:ZDB-GENE-090313-50]

There are 993 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA