Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for seta

Gene Name Gene ID Reads Annotation
seta ENSDARG00000031495 39977 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]










Genes with expression patterns similar to seta

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. seta ENSDARG00000031495 39977 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
2. h2afvb ENSDARG00000116491 35692 3.127 0.702 - - 0.878 - 0.834 0.713 - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
3. stmn1b ENSDARG00000033655 9491 3.07 0.717 - - - 0.739 0.830 - 0.784 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
4. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 2.532 0.812 - - - - 0.812 - - 0.908 calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
5. TUBA1A ENSDARG00000001889 25294 2.495 - - 0.787 - - 0.855 - - 0.853 tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
6. elavl1 11672 2.49 - 0.769 - - - 0.812 - 0.909 - ELAV like RNA binding protein 1, transcript variant X3
7. sf1 ENSDARG00000008188 5142 2.489 - - - - 0.741 0.886 - 0.862 - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
8. zgc:112425 zgc:112425 293873 2.484 0.891 - - 0.735 - 0.858 - - -
9. marcksb ENSDARG00000008803 42949 2.482 - - - 0.858 - 0.870 - 0.754 - myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
10. cbx5 ENSDARG00000061187 24026 2.444 - 0.805 - 0.717 0.922 - - - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
11. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.414 0.742 - - 0.752 - 0.920 - - - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
12. plp1a ENSDARG00000103732 3544 2.369 0.766 0.719 - - - 0.884 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
13. ap2b1 ENSDARG00000035152 2912 2.357 - 0.728 - - - 0.804 - 0.825 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
14. nrarpb ENSDARG00000018958 6225 2.357 0.709 - - - - 0.847 - 0.801 - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
15. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.349 0.764 - - - - 0.860 - 0.725 - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
16. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 61276 2.347 - - - 0.795 - - - 0.767 0.785 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
17. vdac1 ENSDARG00000045132 8051 2.315 0.719 - - 0.754 - 0.842 - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
18. BX511086.1 BX511086.1 8308 2.308 - - - - - 0.751 - 0.728 0.829
19. tra2a ENSDARG00000007863 4449 2.3 - 0.738 - - 0.719 0.843 - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
20. sox2 ENSDARG00000070913 2763 2.277 0.779 - - - - 0.778 - 0.720 - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
21. eif4a3 ENSDARG00000102978 16162 2.257 - - - - 0.747 0.770 - 0.740 - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
22. hoxa5a ENSDARG00000102501 1667 2.215 0.737 0.717 - - - 0.761 - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
23. hmga1a ENSDARG00000028335 254077 2.196 0.771 - - - 0.704 - - 0.721 - high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
24. tmem35 ENSDARG00000052567 5685 2.152 0.702 - - - - 0.703 - 0.747 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
25. khsrp ENSDARG00000026489 15738 1.848 - - - - - 0.950 - 0.898 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
26. h3f3d ENSDARG00000045248 43757 1.833 0.887 - - - - 0.946 - - - H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
27. CYTH2 ENSDARG00000028800 2349 1.811 - - - - - 0.928 - 0.883 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
28. rbm4.3 ENSDARG00000022129 28571 1.747 - - - - 0.887 0.860 - - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
29. kif5aa ENSDARG00000098936 2428 1.745 - - - - - 0.878 - 0.867 - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
30. bri3bp ENSDARG00000010108 6295 1.743 - 0.872 - - - 0.871 - - - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
31. pacsin1b ENSDARG00000042128 1051 1.734 - - - - - 0.820 - 0.914 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
32. TNRC6C_2 TNRC6C_2 2444 1.704 - - - - - 0.837 - 0.867 -
33. hnrnpab hnrnpab 72354 1.702 - - - - - 0.940 - 0.762 -
34. hdac1 ENSDARG00000015427 19804 1.697 - - - - - 0.901 - 0.796 - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
35. GANAB_2 GANAB_2 3210 1.697 - - 0.826 - - 0.871 - - -
36. tmpob ENSDARG00000022978 8121 1.687 - - - - - 0.784 - 0.903 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
37. snrpf ENSDARG00000105037 10241 1.685 - - - - - 0.815 - 0.870 - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
38. nucks1a ENSDARG00000078473 28285 1.684 - - - - - 0.836 - - 0.848 nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
39. hp1bp3 ENSDARG00000044669 23708 1.677 - - - - 0.847 0.830 - - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
40. CABZ01072954.1 CABZ01072954.1 2330 1.677 - - - - - 0.871 - 0.806 -
41. eno2 ENSDARG00000014287 2162 1.676 - - - - - 0.860 - - 0.816 enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
42. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.674 - - - - 0.776 0.898 - - - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
43. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.673 - - - - - 0.899 - 0.774 - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
44. h2afy2_1 ENSDARG00000087897 9887 1.673 - - - - - 0.845 - - 0.828 H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
45. hes6 ENSDARG00000019335 4754 1.671 - - - - - 0.839 - 0.832 - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
46. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.668 - - - - - 0.804 - 0.864 - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
47. IM:7163548 IM:7163548 6540 1.667 - - - - 0.789 0.878 - - -
48. zgc:158409 zgc:158409 21963 1.66 - - - - - 0.858 - 0.802 -
49. tox ENSDARG00000032317 9126 1.66 - - - - - 0.845 - 0.815 - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
50. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.659 - 0.751 - - - 0.908 - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
51. hmgb1b ENSDARG00000030479 10398 1.655 - - - - - 0.853 - 0.802 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
52. nexmifb ENSDARG00000029296 416 1.653 - - - - - 0.830 - 0.823 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
53. tle2 5014 1.652 - - - - - 0.809 - 0.843 - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
54. npm1b ENSDARG00000037675 5448 1.648 - 0.735 - - - 0.913 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
55. lfng ENSDARG00000037879 11783 1.648 0.805 - - - - 0.843 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
56. irx5a ENSDARG00000034043 1694 1.646 - - - - - 0.779 - 0.867 - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
57. xylt1 ENSDARG00000061248 2357 1.645 - - - - - 0.835 - 0.810 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
58. anp32a ENSDARG00000006487 28249 1.645 - - - 0.885 - 0.760 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
59. nr2f2 ENSDARG00000040926 5213 1.643 - - 0.734 - - - - 0.909 - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
60. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.643 - - - - 0.794 - - 0.849 - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
61. atcaya ENSDARG00000071678 344 1.642 - - - - - 0.815 - 0.827 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
62. palm1b ENSDARG00000007818 2128 1.64 - - - - - 0.798 - 0.842 - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
63. si:ch73-21g5.7 ENSDARG00000093156 9412 1.639 0.769 - - - - 0.870 - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
64. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.638 - - - - - 0.759 - 0.879 - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
65. MAP4K4 ENSDARG00000098670 4665 1.635 - - - - 0.762 0.873 - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
66. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.628 - - - - 0.776 0.852 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
67. kpnb1 ENSDARG00000104889 9282 1.627 - - - - - - 0.822 0.805 - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
68. pcdh1gc5 ENSDARG00000104826 10052 1.625 0.757 - - - - 0.868 - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
69. gfap ENSDARG00000025301 5584 1.623 0.763 - - - - 0.860 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
70. cd99l2 ENSDARG00000056722 5036 1.622 - - - - - 0.883 - 0.739 - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
71. aurka ENSDARG00000012485 3304 1.621 - - - - - - - 0.799 0.822 aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
72. eml1 ENSDARG00000042840 569 1.621 - - - - - 0.788 - 0.833 - echinoderm microtubule associated protein like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]
73. ek1 ENSDARG00000020080 742 1.617 - - - - - 0.779 - 0.838 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
74. rpl36 ENSDARG00000100588 115695 1.613 - - - - - - 0.803 - 0.810 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
75. rbfox1 ENSDARG00000014746 2808 1.612 0.754 - - - - 0.858 - - - RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
76. tmeff1b ENSDARG00000056740 11253 1.611 - - - - - 0.755 - 0.856 - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
77. ccnt2b ENSDARG00000036510 3353 1.609 - - - - - 0.787 - - 0.822 cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
78. olfm1b ENSDARG00000014053 1392 1.606 - - - - - 0.807 - 0.799 - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
79. tuba1c ENSDARG00000055216 8384 1.604 0.771 - - - - 0.833 - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
80. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.6 0.754 - - - - 0.846 - - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
81. hmgb3a ENSDARG00000056725 15668 1.599 0.718 - - - - 0.881 - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
82. ddx6 ENSDARG00000061338 2514 1.599 - 0.733 - - - - - 0.866 - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
83. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 1.597 - - 0.787 - - - 0.810 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
84. phf10 ENSDARG00000070084 1210 1.595 - - - - - 0.754 - 0.841 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
85. prpf31 ENSDARG00000095904 526 1.593 - - - - - 0.780 - 0.813 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
86. khdrbs1b ENSDARG00000070475 18157 1.589 - 0.775 - - - - - 0.814 - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
87. rab23 ENSDARG00000004151 1077 1.587 - - - - - 0.799 - 0.788 - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
88. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.587 0.735 - - - - 0.852 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
89. dla ENSDARG00000010791 9281 1.583 0.790 - - - - - - 0.793 - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
90. rnd1l rnd1l 984 1.582 0.718 - - - - 0.864 - - -
91. NAT16 ENSDARG00000086222 4682 1.581 - - - - - 0.766 - 0.815 - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
92. prp19 prp19 4804 1.58 - - - - - 0.735 - 0.845 -
93. onecutl ENSDARG00000040253 2143 1.578 - - - - - 0.753 - 0.825 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
94. CDCA4 ENSDARG00000042319 7918 1.575 - - - - 0.704 0.871 - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
95. vgll4b ENSDARG00000103730 5266 1.574 - - - - - - - 0.751 0.823 vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
96. ZFHX3 ENSDARG00000103057 7759 1.569 0.711 - - - - 0.858 - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
97. psenen ENSDARG00000068698 2777 1.568 - - - - - 0.757 - 0.811 - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
98. nova2 ENSDARG00000017673 7685 1.561 0.788 - - - - 0.773 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
99. tmem127 ENSDARG00000030981 1389 1.56 - - - - - 0.719 - 0.841 - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
100. asnsd1 830 1.56 - - - - - 0.744 - 0.816 - asparagine synthetase domain containing 1, transcript variant X1

There are 1628 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA