Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for serbp1a

Gene Name Gene ID Reads Annotation
serbp1a ENSDARG00000074242 10818 SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]










Genes with expression patterns similar to serbp1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. serbp1a ENSDARG00000074242 10818 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
2. tomm5 ENSDARG00000068265 11813 2.688 0.825 - - 0.990 - - 0.873 - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
3. ARHGAP23 ARHGAP23 3946 2.675 - - - 0.998 0.879 - 0.798 - -
4. rpl13 ENSDARG00000099380 20663 2.564 0.721 - - 0.968 - 0.875 - - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
5. psma3 ENSDARG00000086618 6200 2.492 0.708 - - - 0.877 - 0.907 - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
6. ndufv1 ENSDARG00000036438 8437 2.453 0.763 - - - - 0.874 0.816 - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
7. EIF4G1 EIF4G1 19676 2.445 0.790 - - - 0.862 0.793 - - -
8. celf1 ENSDARG00000005315 5598 2.426 0.756 - 0.932 - - - - - 0.738 cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
9. stip1 ENSDARG00000004906 7742 2.42 0.772 - 0.945 - - 0.703 - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
10. rps29 ENSDARG00000041232 71334 2.393 0.728 - 0.789 0.876 - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
11. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 2.376 0.762 - - - - 0.758 0.856 - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
12. flncb ENSDARG00000018820 5595 2.358 0.710 - 0.918 - - 0.730 - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
13. calm1b ENSDARG00000034187 13158 2.322 0.710 - - - 0.832 0.780 - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
14. srm ENSDARG00000055760 6572 2.297 0.702 - - - - 0.736 0.859 - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
15. cox6b2 ENSDARG00000037860 33134 2.293 0.782 - - 0.766 - 0.745 - - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
16. cnbpb ENSDARG00000070922 14606 2.272 0.721 - - - 0.845 0.706 - - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
17. clic4 ENSDARG00000022995 6064 1.876 - - 0.931 - - - 0.945 - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
18. idh3g ENSDARG00000023648 4877 1.874 - - - 0.999 - - 0.875 - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
19. CU929431.1 CU929431.1 2234 1.873 - - - 0.998 - - 0.875 - -
20. col18a1 col18a1 20555 1.826 - - 0.855 0.971 - - - - -
21. prpf40a ENSDARG00000058467 6565 1.806 - - 0.811 0.995 - - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
22. srsf2a ENSDARG00000057484 25721 1.791 - - - - 0.882 - 0.909 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
23. safb ENSDARG00000020467 5608 1.79 - - - - 0.911 - 0.879 - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
24. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 1.787 - - - - 0.939 0.848 - - - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
25. slmo2 slmo2 5559 1.784 - - - 0.997 - 0.787 - - -
26. scaf11 ENSDARG00000045885 3531 1.777 - - - - 0.910 - 0.867 - - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
27. rpl10 ENSDARG00000025581, ENSDARG00000115128, ENSDARG00000117015 6574 1.767 - - - - - 0.925 0.842 - - ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-030131-8656]
28. pcmt ENSDARG00000015201 5132 1.764 0.768 - - 0.996 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
29. dnmt1 ENSDARG00000030756 2741 1.764 - - 0.925 - - - 0.839 - - DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
30. mrpl27 ENSDARG00000032985 2158 1.757 - - - - - 0.840 0.917 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
31. chd4b ENSDARG00000025789 14299 1.757 - - - 0.898 - - 0.859 - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
32. aass ENSDARG00000051816 3795 1.746 - - - - - 0.799 0.947 - - aminoadipate-semialdehyde synthase [Source:ZFIN;Acc:ZDB-GENE-061220-8]
33. flot1b ENSDARG00000037998 13600 1.736 0.782 - - - - - 0.954 - - flotillin 1b [Source:ZFIN;Acc:ZDB-GENE-020430-2]
34. myom1a ENSDARG00000061249 10230 1.735 - - - 0.989 - 0.746 - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
35. blcap ENSDARG00000052073 8646 1.731 - - 0.735 0.996 - - - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
36. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 1.729 - - 0.916 - - - 0.813 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
37. mfn1b ENSDARG00000079219 1699 1.714 - - - - - 0.803 0.911 - - mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
38. aimp1 ENSDARG00000060036 5343 1.707 0.830 - - - - 0.877 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
39. ap2m1a ENSDARG00000002790 9781 1.703 - - - - 0.866 - 0.837 - - adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
40. ppm1g ENSDARG00000075559 6516 1.699 - - - - 0.826 - 0.873 - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
41. mrpl12 ENSDARG00000038768 5539 1.697 - - - - - 0.779 0.918 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
42. mibp2 ENSDARG00000101844 17444 1.692 - - - - 0.819 0.873 - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
43. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 1.691 0.759 - - - - - 0.932 - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
44. eif2s3 ENSDARG00000008292 17051 1.691 0.710 - - 0.981 - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
45. NDUFA3 ENSDARG00000041400 7939 1.691 - - - - - 0.741 0.950 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
46. sdhdb ENSDARG00000030139 9761 1.679 - - - - - 0.843 0.836 - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
47. timm23 timm23 2712 1.678 - - - - - 0.816 0.862 - -
48. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.678 0.769 - - - - - 0.909 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
49. acsl1 acsl1 4216 1.67 0.788 - - - - 0.882 - - -
50. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 1.668 - - 0.930 - - 0.738 - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
51. si:dkey-238c7.12 si:dkey-238c7.12 6600 1.663 - - 0.923 - - 0.740 - - -
52. mrpl32 ENSDARG00000060489 2728 1.662 - - - - - 0.763 0.899 - - mitochondrial ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060825-188]
53. zgc:77086 ENSDARG00000014015 4908 1.658 - - - - 0.885 0.773 - - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
54. rpl31 ENSDARG00000053365 55475 1.653 - - - 0.701 - - 0.952 - - ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
55. zgc:101846 15202 1.653 0.712 - 0.941 - - - - - - zgc:101846
56. rpl5a ENSDARG00000020197 35209 1.643 0.711 - - 0.932 - - - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
57. ndufv3 ENSDARG00000090389 4829 1.643 - - 0.933 - - 0.710 - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
58. rad23b ENSDARG00000021550 2575 1.639 - - 0.932 - - 0.707 - - - RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]
59. rps25 ENSDARG00000041811 52182 1.637 - - - - - 0.861 0.776 - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
60. igf2bp3 ENSDARG00000010266 5789 1.637 0.719 - - - - - 0.918 - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
61. nop58 ENSDARG00000104353 8497 1.637 0.765 - - - 0.872 - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
62. taok2b_1 ENSDARG00000100620 2082 1.636 - - 0.919 - - 0.717 - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
63. lyrm2 ENSDARG00000033138 5597 1.636 - - - - - 0.757 0.879 - - LYR motif containing 2 [Source:ZFIN;Acc:ZDB-GENE-040914-27]
64. pdcd6 ENSDARG00000005220 1535 1.629 - - - - - 0.714 0.915 - - programmed cell death 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1307]
65. klhl40b ENSDARG00000019125 3633 1.628 0.701 - - - - - 0.927 - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
66. cdkn2aipnl ENSDARG00000053395 5107 1.626 - - - - - 0.710 0.916 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
67. Mar-07 Mar-07 2926 1.623 0.761 - - - - - 0.862 - -
68. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.619 - - - - 0.892 0.727 - - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
69. mycb ENSDARG00000007241 3988 1.618 0.724 - - - - - 0.894 - - MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
70. ube2v2 ENSDARG00000028198 23341 1.616 0.844 - - - - 0.772 - - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
71. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 1.616 - - 0.846 - - 0.770 - - - chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
72. snrpd1 ENSDARG00000011648 8615 1.615 - - - - - 0.719 0.896 - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
73. hars ENSDARG00000003693 7217 1.614 0.759 - - - - 0.855 - - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
74. SYNPO2 SYNPO2 7382 1.609 - - - - - 0.797 0.812 - -
75. srp72 ENSDARG00000014139 5221 1.608 - - - - - 0.781 0.827 - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
76. sgca ENSDARG00000074156 2418 1.607 - - - - - 0.700 0.907 - - sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]
77. rpl7a ENSDARG00000019230 1204 1.607 - - - - - 0.727 0.880 - - ribosomal protein L7a [Source:ZFIN;Acc:ZDB-GENE-031001-9]
78. chchd1 ENSDARG00000029100 2121 1.604 - - - - - 0.707 0.897 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
79. cd82a ENSDARG00000019098 6761 1.601 - - - - - 0.756 0.845 - - CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
80. eif2s2 ENSDARG00000053047 15904 1.599 - - - - - 0.864 - - 0.735 eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
81. larp1b ENSDARG00000061169 9939 1.598 0.721 - - - - - 0.877 - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
82. cct3 ENSDARG00000016173 15869 1.598 0.724 - - - 0.874 - - - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
83. cyc1 ENSDARG00000038075 16699 1.597 0.716 - - - - 0.881 - - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
84. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.593 0.715 - - - - 0.878 - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
85. ilk ENSDARG00000056964 6686 1.589 0.712 - - - - 0.877 - - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
86. plecb ENSDARG00000021987 13621 1.584 0.760 - - - - - 0.824 - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
87. txlnbb ENSDARG00000076241 6396 1.576 0.746 - - - - 0.830 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
88. calr ENSDARG00000076290 13987 1.576 - - - - 0.859 - 0.717 - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
89. WU:FC32F04 WU:FC32F04 2525 1.573 0.723 - 0.850 - - - - - -
90. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.57 0.747 - - - - 0.823 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
91. ndufa10 ENSDARG00000013333 6597 1.57 - - - - - 0.715 0.855 - - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
92. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 1.57 0.748 - 0.822 - - - - - - proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
93. rpl19 ENSDARG00000013307 122192 1.568 - - - 0.850 0.718 - - - - ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
94. ube2g1b ENSDARG00000069527 5376 1.565 0.752 - - - - 0.813 - - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
95. atp5h 18018 1.562 0.746 - - - - 0.816 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
96. ndufs3 ENSDARG00000015385 7790 1.557 0.765 - - - - 0.792 - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
97. eif4ebp2 ENSDARG00000031819 13168 1.554 - - 0.824 - - - 0.730 - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
98. PARL 2511 1.553 - - - - 0.835 0.718 - - - presenilin associated rhomboid like
99. CAPN5 CAPN5 357 1.553 - - - - - 0.711 0.842 - -
100. qkia ENSDARG00000097478 18572 1.552 0.759 - - - - 0.793 - - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]

There are 1207 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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