Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rit1

Gene Name Gene ID Reads Annotation
rit1 ENSDARG00000069150 520 Ras-like without CAAX 1 [Source:ZFIN;Acc:ZDB-GENE-070912-329]










Genes with expression patterns similar to rit1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rit1 ENSDARG00000069150 520 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ras-like without CAAX 1 [Source:ZFIN;Acc:ZDB-GENE-070912-329]
2. dlc ENSDARG00000002336, ENSDARG00000116332 578 1.655 - 0.869 - - - 0.786 - - - deltaC [Source:ZFIN;Acc:ZDB-GENE-000125-4]
3. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1.641 0.761 0.880 - - - - - - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
4. asap2b ENSDARG00000019564 1660 1.537 - 0.776 - - - 0.761 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
5. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.535 - 0.730 - - - - 0.805 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
6. arl6ip6 ENSDARG00000071013 670 1.497 - 0.772 - - - 0.725 - - - ADP-ribosylation factor-like 6 interacting protein 6 [Source:ZFIN;Acc:ZDB-GENE-070410-117]
7. trnau1apa ENSDARG00000101323 911 1.494 - - - - - 0.748 0.746 - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
8. fzd4 ENSDARG00000104117 842 1.484 - 0.708 - - - - 0.776 - - frizzled class receptor 4 [Source:ZFIN;Acc:ZDB-GENE-990415-217]
9. abhd2a ENSDARG00000025797 312 1.477 - 0.720 - - - 0.757 - - - abhydrolase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-040426-784]
10. emx1 ENSDARG00000039569 787 1.465 - 0.761 - - - 0.704 - - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
11. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.46 - - 0.711 - - - 0.749 - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
12. ubap2 ubap2 4167 1.459 0.749 - - - - - 0.710 - -
13. usp4 ENSDARG00000014770 1684 1.458 - 0.757 - - - - 0.701 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
14. tmem33 ENSDARG00000041332 2883 1.406 - - - - - 0.702 0.704 - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
15. ACTN4 ENSDARG00000099786 25 0.969 - 0.969 - - - - - - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
16. ca9 ENSDARG00000102300 193 0.94 - 0.940 - - - - - - - carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
17. irgf3 ENSDARG00000062820 20 0.94 - 0.940 - - - - - - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
18. grhl2b ENSDARG00000061974 779 0.936 - 0.936 - - - - - - - grainyhead-like transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-060503-719]
19. BX119916.1 BX119916.1 19 0.927 - 0.927 - - - - - - -
20. upb1 ENSDARG00000011521, ENSDARG00000116790 920 0.923 - 0.923 - - - - - - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
21. slc4a1b ENSDARG00000024560 172 0.918 - 0.918 - - - - - - - solute carrier family 4 (anion exchanger), member 1b (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-110215-2]
22. si:ch211-212o1.2 ENSDARG00000011498, ENSDARG00000110768 378 0.916 - 0.916 - - - - - - - si:ch211-212o1.2 [Source:ZFIN;Acc:ZDB-GENE-041111-310]
23. btk ENSDARG00000004433 106 0.914 - 0.914 - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
24. rassf10a 417 0.909 - 0.909 - - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
25. tnfaip8l3 ENSDARG00000088709 345 0.897 - 0.897 - - - - - - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
26. actr10 ENSDARG00000038432 1598 0.893 - 0.893 - - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
27. zdhhc16b ENSDARG00000015989 193 0.886 - 0.886 - - - - - - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
28. mavs ENSDARG00000069733 311 0.885 - 0.885 - - - - - - - mitochondrial antiviral signaling protein [Source:ZFIN;Acc:ZDB-GENE-070112-1402]
29. SMIM22 ENSDARG00000105068 246 0.885 - 0.885 - - - - - - - small integral membrane protein 22 [Source:HGNC Symbol;Acc:HGNC:48329]
30. rft1 ENSDARG00000060398 146 0.884 - 0.884 - - - - - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
31. skap2 ENSDARG00000000906 146 0.881 - 0.881 - - - - - - - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
32. acot7 ENSDARG00000018653 693 0.88 - 0.880 - - - - - - - acyl-CoA thioesterase 7 [Source:ZFIN;Acc:ZDB-GENE-040912-42]
33. rtcb ENSDARG00000101047 496 0.879 - - - - - - 0.879 - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2096]
34. ankrd12 ENSDARG00000052419 2579 0.878 - - - - - 0.878 - - - ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
35. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 0.877 - 0.877 - - - - - - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
36. si:ch211-253p2.2 ENSDARG00000071772 64 0.876 - 0.876 - - - - - - - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
37. ZACN ZACN 502 0.874 - 0.874 - - - - - - -
38. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 0.874 - 0.874 - - - - - - - zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
39. si:rp71-1i20.2 ENSDARG00000043198 113 0.874 - 0.874 - - - - - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
40. lonp2 ENSDARG00000101438 179 0.872 - 0.872 - - - - - - - lon peptidase 2, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041212-1]
41. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.872 - 0.872 - - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
42. ago4 ENSDARG00000100854 496 0.872 - 0.872 - - - - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
43. tmem176l.2 ENSDARG00000089399 22 0.872 - 0.872 - - - - - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
44. rarga ENSDARG00000034117 1238 0.871 - - - - - 0.871 - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
45. caln2 ENSDARG00000069766 290 0.869 - 0.869 - - - - - - - calneuron 2 [Source:ZFIN;Acc:ZDB-GENE-091204-251]
46. CCL19_1 CCL19_1 40 0.868 - 0.868 - - - - - - -
47. spam1 ENSDARG00000004199 225 0.868 - - - - - 0.868 - - - sperm adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-050506-63]
48. zgc:153738 ENSDARG00000069230 84 0.867 - 0.867 - - - - - - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
49. plcd3a ENSDARG00000052957 467 0.866 - 0.866 - - - - - - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
50. myo7aa ENSDARG00000099871 23 0.865 - 0.865 - - - - - - - myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
51. cryz ENSDARG00000016074 322 0.865 - - - - - 0.865 - - - crystallin, zeta (quinone reductase) [Source:ZFIN;Acc:ZDB-GENE-050306-24]
52. BX548021.2_1 BX548021.2_1 164 0.865 - 0.865 - - - - - - -
53. RNF157 ENSDARG00000057481 215 0.863 - 0.863 - - - - - - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
54. si:ch211-208f21.2 ENSDARG00000094177 61 0.863 - 0.863 - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
55. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 0.863 - 0.863 - - - - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
56. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 0.86 - 0.860 - - - - - - - ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
57. PLEKHA2 PLEKHA2 43 0.857 - 0.857 - - - - - - -
58. ndp ENSDARG00000076569 120 0.856 - - - - - - 0.856 - - Norrie disease (pseudoglioma) [Source:ZFIN;Acc:ZDB-GENE-060216-2]
59. CR388015.1 CR388015.1 311 0.855 - 0.855 - - - - - - -
60. fut9 fut9 519 0.855 - 0.855 - - - - - - -
61. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 0.854 - - - - - 0.854 - - - fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
62. nol11 ENSDARG00000026767 2528 0.853 - - - - - - 0.853 - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
63. CABZ01088149.1 ENSDARG00000114019 530 0.852 - - - - - 0.852 - - - mitochondrial ubiquitin ligase activator of nfkb 1-A [Source:NCBI gene;Acc:402879]
64. FAM109B FAM109B 470 0.852 - 0.852 - - - - - - -
65. sytl2 sytl2 259 0.852 - 0.852 - - - - - - -
66. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.852 - - - - - 0.852 - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
67. snx6 ENSDARG00000058444 2645 0.851 - - - - - 0.851 - - - sorting nexin 6 [Source:ZFIN;Acc:ZDB-GENE-050913-152]
68. MYO5C ENSDARG00000104235 1285 0.85 - 0.850 - - - - - - - myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
69. gucy1a3 89 0.85 - 0.850 - - - - - - - guanylate cyclase 1, soluble, alpha 3
70. CU929089.1 CU929089.1 479 0.85 - 0.850 - - - - - - -
71. rpz5 ENSDARG00000075718 1703 0.85 - 0.850 - - - - - - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
72. sh2d5 ENSDARG00000014324 228 0.848 - 0.848 - - - - - - - SH2 domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050327-67]
73. gng12a ENSDARG00000003375 1250 0.846 - 0.846 - - - - - - - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
74. POLD4 POLD4 626 0.846 - - - - - 0.846 - - -
75. si:dkey-20i20.2 ENSDARG00000071719 659 0.845 - 0.845 - - - - - - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
76. si:dkey-4i23.5 ENSDARG00000092137 152 0.845 - 0.845 - - - - - - - si:dkey-4i23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-543]
77. SUOX ENSDARG00000091574 122 0.844 - 0.844 - - - - - - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
78. NBEAL1 ENSDARG00000099547 1112 0.844 - 0.844 - - - - - - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
79. slc30a5 ENSDARG00000051921 1113 0.843 - - - - - 0.843 - - - solute carrier family 30 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-040718-6]
80. cox4i1l ENSDARG00000012388 584 0.842 - - - - - - 0.842 - - cytochrome c oxidase subunit 4I1, like [Source:ZFIN;Acc:ZDB-GENE-130814-2]
81. mal 906 0.841 - 0.841 - - - - - - - mal, T-cell differentiation protein
82. col7a1l ENSDARG00000069692 44 0.841 - 0.841 - - - - - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
83. zgc:158868 ENSDARG00000069379, ENSDARG00000116578 121 0.84 - 0.840 - - - - - - - zgc:158868 [Source:ZFIN;Acc:ZDB-GENE-070112-892]
84. aftphb ENSDARG00000071347 161 0.84 0.840 - - - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
85. DSP DSP 199 0.84 - 0.840 - - - - - - -
86. GAS2L1 ENSDARG00000078803 315 0.839 - 0.839 - - - - - - - growth arrest-specific 2 like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-38]
87. armc1l ENSDARG00000020887 1219 0.839 - 0.839 - - - - - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
88. nudt2 ENSDARG00000058728 371 0.839 - 0.839 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
89. malt1b malt1b 244 0.838 - 0.838 - - - - - - -
90. si:dkey-229d2.7 ENSDARG00000092460 15 0.837 - 0.837 - - - - - - - si:dkey-229d2.7 [Source:ZFIN;Acc:ZDB-GENE-060526-265]
91. rfx5 ENSDARG00000063258 806 0.835 - - - - - - 0.835 - - regulatory factor X, 5 [Source:ZFIN;Acc:ZDB-GENE-070717-3]
92. galcb ENSDARG00000016474 615 0.834 - - - - - 0.834 - - - galactosylceramidase b [Source:ZFIN;Acc:ZDB-GENE-040426-2115]
93. ca4c ENSDARG00000044512 102 0.834 - 0.834 - - - - - - - carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
94. C19H1orf51 C19H1orf51 1776 0.833 - 0.833 - - - - - - -
95. ppwd1 ENSDARG00000063161 752 0.832 - 0.832 - - - - - - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-16]
96. PARP8 ENSDARG00000059789 264 0.832 - - - - - 0.832 - - - poly (ADP-ribose) polymerase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-060929-432]
97. cdk2 ENSDARG00000026577 2835 0.832 - - - - - 0.832 - - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
98. zc3h7b 2936 0.831 - 0.831 - - - - - - - zinc finger CCCH-type containing 7B
99. prkrira 971 0.831 - - - - - - 0.831 - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
100. sccpdhb ENSDARG00000024564 707 0.83 - - - - - 0.830 - - - saccharopine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-041010-211]

There are 746 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA