Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rhoub

Gene Name Gene ID Reads Annotation
rhoub ENSDARG00000012968 1143 ras homolog family member Ub [Source:ZFIN;Acc:ZDB-GENE-050417-308]










Genes with expression patterns similar to rhoub

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rhoub ENSDARG00000012968 1143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ras homolog family member Ub [Source:ZFIN;Acc:ZDB-GENE-050417-308]
2. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.587 - 0.739 - - - 0.848 - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
3. atp5e 14858 1.568 - - - - - 0.823 0.745 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
4. phldb1a ENSDARG00000061093 1637 1.566 - - - - - 0.802 0.764 - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
5. si:dkey-193c22.2 ENSDARG00000076735 2791 1.544 - 0.724 - - - 0.820 - - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
6. gpsm1b ENSDARG00000054874 1308 1.533 - - - - - 0.785 0.748 - - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
7. dctn3 ENSDARG00000041363 3351 1.531 - 0.746 - - - - 0.785 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
8. vps4a ENSDARG00000030114 933 1.484 - 0.738 - - - - 0.746 - - vacuolar protein sorting 4a homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-388]
9. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 1.482 - - - - - 0.743 0.739 - - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
10. si:dkey-19a16.4 ENSDARG00000071657 190 1.477 - - - - - 0.715 0.762 - - si:dkey-19a16.4 [Source:ZFIN;Acc:ZDB-GENE-050208-652]
11. anapc13 ENSDARG00000078435 996 1.457 - - - - - 0.713 0.744 - - anaphase promoting complex subunit 13 [Source:ZFIN;Acc:ZDB-GENE-091204-298]
12. ltv1 ENSDARG00000008490 2403 1.454 - - - - - 0.738 0.716 - - LTV1 ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-040712-1]
13. alas1 ENSDARG00000021059 4892 1.43 - 0.724 - - - - 0.706 - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
14. rac1 rac1 7341 1.402 - - - - - 0.702 0.700 - -
15. ginm1 ENSDARG00000021975 1393 0.862 - - - - - 0.862 - - - glycoprotein integral membrane 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5900]
16. dhrs1 ENSDARG00000054300, ENSDARG00000116842 555 0.861 - 0.861 - - - - - - - dehydrogenase/reductase (SDR family) member 1 [Source:ZFIN;Acc:ZDB-GENE-030616-591]
17. asic1a ENSDARG00000008329 347 0.861 - 0.861 - - - - - - - acid-sensing (proton-gated) ion channel 1a [Source:ZFIN;Acc:ZDB-GENE-040513-2]
18. adnp2b ENSDARG00000028431 4683 0.861 - - - - - 0.861 - - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
19. memo1 ENSDARG00000010823 1681 0.86 - - - - - 0.860 - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
20. ftsjd2 ftsjd2 2694 0.854 - - - - - - 0.854 - -
21. ppfibp2b ENSDARG00000029168 961 0.846 - - - - - 0.846 - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
22. ebag9 ENSDARG00000040021 2217 0.842 - - - - - 0.842 - - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
23. si:ch1073-325m22.2 ENSDARG00000095921 8534 0.841 - - - - - - 0.841 - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
24. ubald1b ENSDARG00000020976 1162 0.841 - - - - - 0.841 - - - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
25. psma4 ENSDARG00000045928 5112 0.84 - - - - - 0.840 - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
26. lrrc8da ENSDARG00000103370 676 0.838 - - - - - - 0.838 - - leucine rich repeat containing 8 VRAC subunit Da [Source:ZFIN;Acc:ZDB-GENE-061009-26]
27. ruvbl1 ENSDARG00000002591 2381 0.836 - - - - - 0.836 - - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
28. alg3 ENSDARG00000053155 1843 0.836 - - - - - - 0.836 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
29. C20H12orf57 C20H12orf57 3325 0.836 - - - - - 0.836 - - -
30. tns1 tns1 5891 0.834 - - - - - - 0.834 - -
31. atp5ia 4773 0.831 - - - - - 0.831 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
32. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 0.829 - - - - - - 0.829 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
33. prtfdc1 ENSDARG00000011683 1534 0.829 - - - - - 0.829 - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
34. DUSP28 ENSDARG00000059695 1135 0.827 - - - - - 0.827 - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
35. nat15 ENSDARG00000061185 396 0.827 - - - - - 0.827 - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
36. lats2 ENSDARG00000078864, ENSDARG00000115103 2063 0.826 - 0.826 - - - - - - - large tumor suppressor kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050119-6]
37. cnbpb ENSDARG00000070922 14606 0.826 - - - - - - 0.826 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
38. KDELR3 ENSDARG00000040912 109 0.826 - 0.826 - - - - - - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1387]
39. efr3a_1 ENSDARG00000005163, ENSDARG00000115083 571 0.825 - - - - - 0.825 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
40. rerea ENSDARG00000077353 4162 0.824 - - - - - 0.824 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
41. LMLN ENSDARG00000061265 1618 0.823 - - - - - 0.823 - - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
42. usp1 ENSDARG00000056414 1816 0.823 - - - - - 0.823 - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
43. gadd45ab ENSDARG00000104571, ENSDARG00000110532 770 0.821 - 0.821 - - - - - - - growth arrest and DNA-damage-inducible, alpha, b [Source:ZFIN;Acc:ZDB-GENE-040704-60]
44. sept9b ENSDARG00000103900, ENSDARG00000113442 1495 0.821 - - - - - 0.821 - - - septin 9b [Source:ZFIN;Acc:ZDB-GENE-050327-17]
45. carf ENSDARG00000019950 303 0.819 - - - - - 0.819 - - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
46. C3H19orf52 C3H19orf52 541 0.819 - - - - - - 0.819 - -
47. exoc3l4 ENSDARG00000058180 923 0.819 - - - - - 0.819 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
48. mgat4b ENSDARG00000004115 538 0.818 - - - - - - 0.818 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:ZFIN;Acc:ZDB-GENE-040704-19]
49. wnt11r ENSDARG00000014796 2860 0.817 - - - - - 0.817 - - - wingless-type MMTV integration site family, member 11, related [Source:ZFIN;Acc:ZDB-GENE-980526-249]
50. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.816 - 0.816 - - - - - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
51. hars2 hars2 1104 0.815 - - - - - - 0.815 - -
52. arrdc2 ENSDARG00000020761 621 0.814 - 0.814 - - - - - - - arrestin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7146]
53. lmbrd1 ENSDARG00000104223 924 0.814 - - - - - 0.814 - - - LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
54. tmem167a ENSDARG00000035914 3319 0.814 - - - - - 0.814 - - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
55. BX004880.1 BX004880.1 638 0.814 - - - - - 0.814 - - -
56. ubp1 ENSDARG00000018000 1047 0.814 - - - - - 0.814 - - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
57. ergic3 ENSDARG00000038074 1773 0.813 - - - - - 0.813 - - - ERGIC and golgi 3 [Source:ZFIN;Acc:ZDB-GENE-040426-795]
58. Sep-02 Sep-02 10074 0.813 - - - - - 0.813 - - -
59. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 0.812 - - - - - 0.812 - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
60. rab23 ENSDARG00000004151 1077 0.812 - - - - - 0.812 - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
61. gltpd1 gltpd1 377 0.812 - - - - - 0.812 - - -
62. CR387996.1 ENSDARG00000097774 3037 0.811 - - - - - 0.811 - - -
63. sepw2a 8597 0.811 - - - - - 0.811 - - - selenoprotein W, 2a
64. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 0.811 - - - - - 0.811 - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
65. eef1db ENSDARG00000030053 5185 0.809 - - - - - - 0.809 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
66. cdc23 ENSDARG00000044484 767 0.809 - 0.809 - - - - - - - CDC23 (cell division cycle 23, yeast, homolog) [Source:ZFIN;Acc:ZDB-GENE-040426-866]
67. ube2a ENSDARG00000098466 12765 0.808 - - - - - - 0.808 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
68. rabep1 ENSDARG00000059600, ENSDARG00000110933 1003 0.805 - 0.805 - - - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-165]
69. fbxw5 ENSDARG00000099139 2802 0.805 - - - - - - 0.805 - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
70. ddx42 ENSDARG00000037928 1659 0.804 - - - - - 0.804 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
71. dpm2 ENSDARG00000095623, ENSDARG00000115283 981 0.804 - 0.804 - - - - - - - dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9093]
72. sf1 ENSDARG00000008188 5142 0.803 - - - - - 0.803 - - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
73. hsbp1b ENSDARG00000041921 6170 0.802 - - - - - 0.802 - - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
74. naa15a ENSDARG00000003213 5889 0.802 - - - - - - 0.802 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
75. elmod2 ENSDARG00000101669 3101 0.802 - - - - - 0.802 - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
76. tox4 tox4 1671 0.8 - - - - - 0.800 - - -
77. mt-nd4l ENSDARG00000063916 2229 0.8 - - - - - - 0.800 - - NADH dehydrogenase 4L, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-11]
78. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 0.799 - - - - - - 0.799 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
79. palm1b ENSDARG00000007818 2128 0.799 - - - - - 0.799 - - - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
80. lrig2 ENSDARG00000078561, ENSDARG00000116750 2559 0.799 - 0.799 - - - - - - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-041111-75]
81. osbpl2a ENSDARG00000053804 1883 0.798 - - - - - - 0.798 - - oxysterol binding protein-like 2a [Source:ZFIN;Acc:ZDB-GENE-091116-46]
82. spag7 ENSDARG00000011555 3224 0.797 - - - - - 0.797 - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
83. slc38a5a ENSDARG00000009901 2527 0.797 - - - - - 0.797 - - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
84. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 0.796 - 0.796 - - - - - - - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
85. RUNDC1 ENSDARG00000091962 693 0.795 - - - - - 0.795 - - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
86. AKAP2 AKAP2 4178 0.795 - - - - - - 0.795 - -
87. HPDL ENSDARG00000113721 264 0.795 - - - - - 0.795 - - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
88. med19a ENSDARG00000037392, ENSDARG00000114246 2231 0.795 - 0.795 - - - - - - - mediator complex subunit 19a [Source:ZFIN;Acc:ZDB-GENE-060929-232]
89. rprd2a ENSDARG00000058089 743 0.795 - 0.795 - - - - - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
90. CR354611.2 CR354611.2 2040 0.794 - - - - - 0.794 - - -
91. adamtsl7 ENSDARG00000055439 575 0.794 - - - - - 0.794 - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
92. zgc:136930 ENSDARG00000055192 1208 0.794 - - - - - - 0.794 - - zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16]
93. sptlc3 ENSDARG00000030743 596 0.794 - 0.794 - - - - - - - serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
94. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 0.794 - - - - - 0.794 - - - CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
95. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 0.794 - 0.794 - - - - - - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
96. BX294110.1 ENSDARG00000096875 1761 0.794 - - - - - 0.794 - - -
97. asphd2 ENSDARG00000059629 1005 0.793 - - - - - - 0.793 - - aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
98. si:ch211-213a13.1 ENSDARG00000090600 381 0.793 - - - - - 0.793 - - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
99. nedd4l ENSDARG00000060006 1669 0.793 - - - - - 0.793 - - - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
100. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 0.793 - - - - - - 0.793 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]

There are 942 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA