Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptprsa

Gene Name Gene ID Reads Annotation
ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]










Genes with expression patterns similar to ptprsa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
2. eif5 ENSDARG00000003681 7986 2.669 0.882 0.969 0.818 - - - - - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
3. dido1 ENSDARG00000057940 3819 2.65 - 0.975 - - 0.939 0.736 - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
4. sf3b1 ENSDARG00000056138 5785 2.638 - 0.970 - 0.832 - - - - 0.836 splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
5. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.611 - - - - 0.857 0.754 1.000 - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
6. elavl1 11672 2.605 - 0.981 - - 0.780 0.844 - - - ELAV like RNA binding protein 1, transcript variant X3
7. kpna2 ENSDARG00000038066 7954 2.584 0.875 - 0.711 - - - 0.998 - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
8. npm1b ENSDARG00000037675 5448 2.435 - 0.965 - - - 0.714 - - 0.756 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
9. smc1al ENSDARG00000058203 8838 2.432 - - - - 0.921 0.748 - - 0.763 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
10. ddx39ab ENSDARG00000015111 11619 2.393 - - 0.833 - - 0.766 - - 0.794 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
11. stxbp1a ENSDARG00000001994 5154 2.296 0.834 - 0.761 - - 0.701 - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
12. ARHGAP22 ENSDARG00000076434 1406 2.251 - - 0.756 0.716 - 0.779 - - - Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
13. MAF1 ENSDARG00000013122 6899 1.966 - 0.967 - - - - 0.999 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
14. arf6a ENSDARG00000101626 2959 1.959 - 0.965 - - - - 0.994 - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
15. znf740 znf740 2458 1.958 - 0.959 - - - - 0.999 - -
16. hif1ab ENSDARG00000034293 10284 1.929 - - - - 0.940 - 0.989 - - hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
17. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.925 0.926 - - - - - 0.999 - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
18. si:ch211-251b21.1 ENSDARG00000007275 15724 1.915 - 0.956 - - - - 0.959 - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
19. cylda ENSDARG00000060058 768 1.866 0.916 0.950 - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
20. itgb1bp1 ENSDARG00000007169 2723 1.844 - 0.886 - - 0.958 - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
21. atl3 ENSDARG00000004270 2806 1.837 0.894 0.943 - - - - - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
22. ube2v1 ENSDARG00000041875 5739 1.836 0.865 0.971 - - - - - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
23. ppp2r2d ENSDARG00000102009 5710 1.822 - - 0.866 - 0.956 - - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
24. CWC15 ENSDARG00000013382 8969 1.809 - - - - 0.937 0.872 - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
25. hnrnph1l ENSDARG00000005551 8727 1.809 0.935 - - - 0.874 - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
26. snx12 ENSDARG00000019060 9563 1.807 - - 0.854 - 0.953 - - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
27. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.797 0.954 - - - 0.843 - - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
28. PCBP4 ENSDARG00000024276 3194 1.775 - - 0.781 - - - 0.994 - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
29. atp1a3a ENSDARG00000018259 5393 1.774 - - - - - 0.775 0.999 - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
30. gtpbp4 ENSDARG00000018961 5323 1.772 0.938 - - - 0.834 - - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
31. dkc1 ENSDARG00000016484 7088 1.769 0.944 - - - - - - - 0.825 dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
32. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.758 - - - - - 0.759 0.999 - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
33. rps11 ENSDARG00000053058 16233 1.758 0.874 - - - 0.884 - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
34. klc2 3058 1.752 - - - - 0.960 0.792 - - - kinesin light chain 2
35. eif5b ENSDARG00000016548 3972 1.75 - 0.972 - - - - - - 0.778 eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
36. arrdc3b ENSDARG00000036028 3157 1.749 - 0.956 - - - 0.793 - - - arrestin domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-040912-182]
37. ACVR2B 6615 1.748 - - - - - 0.749 0.999 - - activin A receptor, type IIB
38. CR387996.1 ENSDARG00000097774 3037 1.744 - - - - 0.963 - - - 0.781
39. nkain1 ENSDARG00000006859 1961 1.739 - - - - 0.969 0.770 - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
40. hoxc8a ENSDARG00000070346 4252 1.738 0.939 - - - - 0.799 - - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
41. FAM110D FAM110D 3632 1.734 0.848 0.886 - - - - - - -
42. HECW1 HECW1 1531 1.732 - - - - - 0.733 0.999 - -
43. ammecr1 ENSDARG00000012892 14475 1.73 0.916 0.814 - - - - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
44. ndfip2 ENSDARG00000033928 3129 1.726 - - - - 0.933 - - - 0.793 Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
45. cpne1 ENSDARG00000075536 4063 1.722 0.839 0.883 - - - - - - - copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
46. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.718 - - 0.750 - 0.968 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
47. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.711 0.919 - - 0.792 - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
48. rnf20 ENSDARG00000016664 3641 1.709 - - - - 0.960 - - - 0.749 ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
49. snrnp70 ENSDARG00000077126 5921 1.709 - - - - 0.972 0.737 - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
50. prox1a ENSDARG00000055158 1411 1.705 - - - - 0.971 0.734 - - - prospero homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-397]
51. ing4 ENSDARG00000030716 5908 1.701 - - - - - 0.712 0.989 - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
52. cks1b ENSDARG00000007971 2739 1.7 - - 0.732 - 0.968 - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
53. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.694 0.933 - - - - 0.761 - - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
54. ubtf ENSDARG00000035066 4070 1.693 - - - - 0.970 0.723 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
55. pou4f1 ENSDARG00000005559 821 1.687 - - - 0.723 0.964 - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
56. elavl3 ENSDARG00000014420 8644 1.686 0.926 - - - - 0.760 - - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
57. AL935029.1 AL935029.1 514 1.685 0.926 - - - - 0.759 - - -
58. LEPROTL1 ENSDARG00000104871 3019 1.678 - - - - 0.952 0.726 - - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
59. lrp1b lrp1b 3216 1.677 - - 0.713 - 0.964 - - - -
60. nova1 ENSDARG00000020178 4129 1.675 0.933 - - - - 0.742 - - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
61. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.669 0.962 - - - - 0.707 - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
62. itm2ca ENSDARG00000043448 1265 1.668 0.927 - - - - 0.741 - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
63. oaz1b ENSDARG00000104782 37623 1.668 - 0.842 0.826 - - - - - - ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
64. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.668 - - 0.820 - - 0.848 - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
65. lbx1a ENSDARG00000018321 634 1.667 - 0.953 - - - 0.714 - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
66. cltcb ENSDARG00000090716 5544 1.661 0.932 - - - - 0.729 - - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
67. hoxa5a ENSDARG00000102501 1667 1.658 - 0.955 - - - 0.703 - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
68. rbm25 rbm25 3629 1.655 - - 0.811 - - 0.844 - - -
69. znf865 ENSDARG00000036698 15532 1.65 - - - - - 0.850 - - 0.800 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
70. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.639 0.928 - - - - 0.711 - - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
71. prdx2 ENSDARG00000025350 11194 1.636 - 0.889 0.747 - - - - - - peroxiredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-030326-2]
72. krcp ENSDARG00000040224 5961 1.634 0.863 - - - - - - - 0.771 kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
73. hspa9 ENSDARG00000003035, ENSDARG00000114629 13898 1.618 0.878 - 0.740 - - - - - - heat shock protein 9 [Source:ZFIN;Acc:ZDB-GENE-030828-12]
74. ube2e1 ENSDARG00000116649 10656 1.61 - - - - 0.814 0.796 - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
75. lsm7 ENSDARG00000058328 7191 1.609 - - 0.817 - 0.792 - - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
76. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.608 0.902 - - - - 0.706 - - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
77. pou3f3a ENSDARG00000042032 2835 1.607 - - 0.812 - - 0.795 - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
78. AP3B2 1874 1.605 - - - - 0.851 0.754 - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
79. cant1a ENSDARG00000012192 1324 1.604 0.898 - - 0.706 - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
80. lypla2 ENSDARG00000053656 8971 1.603 - - 0.864 - - 0.739 - - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
81. gcn1l1 gcn1l1 6031 1.603 - 0.840 - - - - - - 0.763
82. dnajc5aa ENSDARG00000042948 2885 1.594 - - 0.804 - - 0.790 - - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
83. rhoaa ENSDARG00000026845 6900 1.592 - - - - 0.840 0.752 - - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
84. klhl31 ENSDARG00000039066 13656 1.591 0.768 0.823 - - - - - - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
85. luc7l ENSDARG00000055903 3357 1.587 - - 0.816 - - 0.771 - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
86. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.586 0.820 - - - - 0.766 - - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
87. clstn1 ENSDARG00000031720 5286 1.574 - - 0.784 - - 0.790 - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
88. cand1 ENSDARG00000017841 8164 1.57 - - 0.853 - - 0.717 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
89. lpar6a ENSDARG00000062552 1348 1.564 - - 0.739 - - 0.825 - - - lysophosphatidic acid receptor 6a [Source:ZFIN;Acc:ZDB-GENE-061013-343]
90. ccdc85ca ENSDARG00000005232 3218 1.563 - - 0.809 - - 0.754 - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
91. tfap4 ENSDARG00000103923 2203 1.562 - - 0.805 - - - - - 0.757 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
92. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.562 - - 0.705 - 0.857 - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
93. cnbpa ENSDARG00000045776 8648 1.56 - - 0.833 - - - - - 0.727 CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
94. TMEM30B ENSDARG00000054122 1519 1.555 0.832 - 0.723 - - - - - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
95. fmnl2b ENSDARG00000075041 1744 1.554 - - 0.761 - - 0.793 - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
96. smarca4 smarca4 9726 1.553 - - 0.788 - - 0.765 - - -
97. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.55 - - - - - 0.757 - - 0.793 N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
98. eaf2 ENSDARG00000010432 3768 1.548 - - 0.789 - - 0.759 - - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
99. etf1 etf1 12861 1.543 - - 0.833 - 0.710 - - - -
100. dpy30 ENSDARG00000004427 7112 1.541 - - - - - 0.746 0.795 - - dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]

There are 1500 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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