Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptprea

Gene Name Gene ID Reads Annotation
ptprea ENSDARG00000015891 445 protein tyrosine phosphatase, receptor type, E, a [Source:ZFIN;Acc:ZDB-GENE-100714-1]










Genes with expression patterns similar to ptprea

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptprea ENSDARG00000015891 445 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, E, a [Source:ZFIN;Acc:ZDB-GENE-100714-1]
2. C8H9orf3 C8H9orf3 414 1.434 - 0.720 - - - 0.714 - - -
3. nanp ENSDARG00000075143, ENSDARG00000114467 328 0.893 - 0.893 - - - - - - - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
4. si:ch211-226m16.2 ENSDARG00000036785 2163 0.87 - 0.870 - - - - - - - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
5. snoU2_19 snoU2_19 301 0.866 0.866 - - - - - - - -
6. CABZ01051991.1 CABZ01051991.1 346 0.864 - 0.864 - - - - - - -
7. cstf2 ENSDARG00000090788 170 0.861 - 0.861 - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]
8. alx4a ENSDARG00000088332 895 0.859 - 0.859 - - - - - - - ALX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-070712-3]
9. nedd1 ENSDARG00000013472 209 0.847 - - - - - - 0.847 - - neural precursor cell expressed, developmentally down-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2906]
10. efcab4a efcab4a 110 0.845 - 0.845 - - - - - - -
11. zgc:101040 ENSDARG00000005176 369 0.845 - 0.845 - - - - - - - zgc:101040 [Source:ZFIN;Acc:ZDB-GENE-040801-107]
12. otx2 766 0.842 - 0.842 - - - - - - - orthodenticle homeobox 2, transcript variant X2
13. rbm18 ENSDARG00000044255, ENSDARG00000111311 589 0.83 - - - - - 0.830 - - - RNA binding motif protein 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1764]
14. ipo13 ENSDARG00000060618 827 0.825 - - - - - 0.825 - - - importin 13 [Source:ZFIN;Acc:ZDB-GENE-070706-1]
15. wdhd1 ENSDARG00000015998 775 0.825 - 0.825 - - - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
16. tmed8 ENSDARG00000052390 469 0.823 - 0.823 - - - - - - - transmembrane p24 trafficking protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-283]
17. POLE4 ENSDARG00000013016 848 0.818 - 0.818 - - - - - - - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
18. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 0.818 - 0.818 - - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
19. cby1 ENSDARG00000077409, ENSDARG00000113018 772 0.815 - - - - - 0.815 - - - chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
20. cyb5r1 ENSDARG00000018966, ENSDARG00000112062 1017 0.815 - 0.815 - - - - - - - cytochrome b5 reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8497]
21. mad1l1 ENSDARG00000033852 464 0.814 - - - - - - 0.814 - - mitotic arrest deficient 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1081]
22. apbb1 ENSDARG00000076560 1748 0.814 - - - - - 0.814 - - - amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) [Source:ZFIN;Acc:ZDB-GENE-091118-127]
23. CCDC80 ENSDARG00000000002 413 0.813 - - - - - - 0.813 - - coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
24. rnf19b ENSDARG00000060926 157 0.81 - 0.810 - - - - - - - ring finger protein 19B [Source:ZFIN;Acc:ZDB-GENE-060503-281]
25. TMEM245 ENSDARG00000070455 85 0.808 - 0.808 - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
26. NDST1 NDST1 1584 0.808 - 0.808 - - - - - - -
27. sertad2b ENSDARG00000055530 785 0.805 - 0.805 - - - - - - - SERTA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030616-569]
28. dnajb9a ENSDARG00000052072 578 0.805 - 0.805 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
29. gtf3c4 ENSDARG00000069538 130 0.804 0.804 - - - - - - - - general transcription factor IIIC, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-041008-147]
30. CABZ01066502.1 CABZ01066502.1 783 0.803 - 0.803 - - - - - - -
31. nelfe ENSDARG00000004343 1647 0.799 - - - - - - 0.799 - - negative elongation factor complex member E [Source:ZFIN;Acc:ZDB-GENE-040718-69]
32. BX682552.2 BX682552.2 1427 0.799 - 0.799 - - - - - - -
33. eftud2 ENSDARG00000012261 3081 0.798 - - - - - 0.798 - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
34. bmp5 ENSDARG00000101701 517 0.796 - 0.796 - - - - - - - bone morphogenetic protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1413]
35. cln6a ENSDARG00000077584 1090 0.796 - 0.796 - - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
36. phf5a ENSDARG00000045155, ENSDARG00000114593 1365 0.796 - - - - - - 0.796 - - PHD finger protein 5A [Source:ZFIN;Acc:ZDB-GENE-021219-3]
37. kif15 ENSDARG00000012073 1936 0.795 - 0.795 - - - - - - - kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
38. mtpap ENSDARG00000076155, ENSDARG00000112828 272 0.795 - - - - - - 0.795 - - mitochondrial poly(A) polymerase [Source:ZFIN;Acc:ZDB-GENE-101208-3]
39. gsr ENSDARG00000019236, ENSDARG00000114106 1149 0.794 - 0.794 - - - - - - - glutathione reductase [Source:ZFIN;Acc:ZDB-GENE-050522-116]
40. tpm1 ENSDARG00000087402 1666 0.793 - 0.793 - - - - - - - tropomyosin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-854]
41. plcg2 ENSDARG00000068763 102 0.793 - 0.793 - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
42. pex26 ENSDARG00000073858 244 0.793 - 0.793 - - - - - - - peroxisomal biogenesis factor 26 [Source:ZFIN;Acc:ZDB-GENE-030131-6584]
43. tmem57b 871 0.792 - 0.792 - - - - - - - transmembrane protein 57b, transcript variant X2
44. crabp2a_1 ENSDARG00000073978 888 0.79 - 0.790 - - - - - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
45. osbpl7 ENSDARG00000012981, ENSDARG00000112388 1507 0.789 - 0.789 - - - - - - - oxysterol binding protein-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-212]
46. si:dkey-117n7.4 ENSDARG00000092064 22 0.789 - 0.789 - - - - - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
47. CALN1 ENSDARG00000088898 114 0.789 - 0.789 - - - - - - - calneuron 1 [Source:ZFIN;Acc:ZDB-GENE-130313-1]
48. gpatch2 1221 0.786 - 0.786 - - - - - - - G patch domain containing 2, transcript variant X1
49. zfp64 ENSDARG00000061147 44 0.785 - 0.785 - - - - - - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
50. snrpb2 ENSDARG00000039424 1597 0.785 - 0.785 - - - - - - - small nuclear ribonucleoprotein polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-060616-2]
51. MSI1 ENSDARG00000010710 478 0.784 - - - - - - - 0.784 - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
52. foxn3 ENSDARG00000012833 169 0.783 - 0.783 - - - - - - - forkhead box N3 [Source:ZFIN;Acc:ZDB-GENE-060512-39]
53. kctd7 ENSDARG00000061580 44 0.783 - 0.783 - - - - - - - potassium channel tetramerization domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060804-2]
54. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 0.78 - 0.780 - - - - - - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
55. bicc1b ENSDARG00000070497 406 0.779 - - - - - - 0.779 - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
56. ddrgk1 ENSDARG00000037172 14 0.779 - 0.779 - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
57. si:dkey-27c15.3 ENSDARG00000056847 37 0.779 - 0.779 - - - - - - - si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
58. hivep3a ENSDARG00000075928 17 0.779 - 0.779 - - - - - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
59. si:ch211-214c7.4 ENSDARG00000069595 56 0.778 - 0.778 - - - - - - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
60. twist3 ENSDARG00000019646 1221 0.777 - 0.777 - - - - - - - twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
61. NAIF1 ENSDARG00000062753 696 0.776 - - - - - 0.776 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
62. si:dkey-66n24.2 si:dkey-66n24.2 69 0.776 - 0.776 - - - - - - -
63. mhc1zba ENSDARG00000036588 761 0.774 - 0.774 - - - - - - - major histocompatibility complex class I ZBA [Source:ZFIN;Acc:ZDB-GENE-040426-2149]
64. hoxc13b ENSDARG00000113877 549 0.772 - 0.772 - - - - - - - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
65. BACH1 BACH1 1021 0.771 - 0.771 - - - - - - -
66. trim33 ENSDARG00000016181 1718 0.769 - 0.769 - - - - - - - tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
67. anapc7 ENSDARG00000063005 1139 0.768 - 0.768 - - - - - - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
68. gmnn ENSDARG00000035957, ENSDARG00000113743 682 0.767 - 0.767 - - - - - - - geminin, DNA replication inhibitor [Source:ZFIN;Acc:ZDB-GENE-030429-30]
69. SPINK4 ENSDARG00000091609 44 0.767 - 0.767 - - - - - - - serine peptidase inhibitor, Kazal type 4 [Source:ZFIN;Acc:ZDB-GENE-130821-1]
70. ccdc3 ccdc3 559 0.766 - 0.766 - - - - - - -
71. SMIM4 ENSDARG00000089921, ENSDARG00000113338, ENSDARG00000114490 831 0.766 - - - - - - 0.766 - - small integral membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-170130-1]
72. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 0.766 - 0.766 - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
73. CR384099.1 ENSDARG00000089193 193 0.766 - 0.766 - - - - - - -
74. CR925880.1 CR925880.1 196 0.766 - 0.766 - - - - - - -
75. nkd2a ENSDARG00000055271 71 0.766 - 0.766 - - - - - - - naked cuticle homolog 2a [Source:ZFIN;Acc:ZDB-GENE-071130-1]
76. snai1a ENSDARG00000056995 1427 0.765 - - - - - - 0.765 - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
77. tmtc2 tmtc2 798 0.764 - - - - - - - 0.764 -
78. slc23a3 ENSDARG00000088891 47 0.764 - 0.764 - - - - - - - solute carrier family 23, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-714]
79. adar ENSDARG00000012389 520 0.763 - 0.763 - - - - - - - adenosine deaminase, RNA-specific [Source:ZFIN;Acc:ZDB-GENE-000616-5]
80. si:ch211-200p22.4 ENSDARG00000029170, ENSDARG00000110266 175 0.763 - 0.763 - - - - - - - si:ch211-200p22.4 [Source:ZFIN;Acc:ZDB-GENE-081104-61]
81. aga ENSDARG00000004889, ENSDARG00000114305 368 0.763 - 0.763 - - - - - - - aspartylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-040426-2311]
82. alcamb ENSDARG00000058538 5672 0.763 - 0.763 - - - - - - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
83. slc35a4 ENSDARG00000062379 1088 0.763 - 0.763 - - - - - - - solute carrier family 35, member A4 [Source:ZFIN;Acc:ZDB-GENE-061103-595]
84. GSG2 GSG2 1162 0.763 - - - - - - - 0.763 -
85. CR361561.3 CR361561.3 91 0.762 - 0.762 - - - - - - -
86. tbx3a ENSDARG00000002216 2270 0.761 - 0.761 - - - - - - - T-box 3a [Source:ZFIN;Acc:ZDB-GENE-070209-80]
87. nans nans 1365 0.76 - - - - - 0.760 - - -
88. ptgdsb ptgdsb 5200 0.76 - 0.760 - - - - - - -
89. CABZ01069576.1 CABZ01069576.1 202 0.758 0.758 - - - - - - - -
90. micall2b ENSDARG00000017834 569 0.758 - 0.758 - - - - - - - mical-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5803]
91. xirp1 ENSDARG00000030722 1486 0.758 - - - - - - 0.758 - - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
92. MSL1 MSL1 223 0.758 - 0.758 - - - - - - -
93. mmp15a ENSDARG00000051962 932 0.757 - 0.757 - - - - - - - matrix metallopeptidase 15a [Source:ZFIN;Acc:ZDB-GENE-070817-4]
94. slc50a1 ENSDARG00000015158 329 0.757 - - - - 0.757 - - - - solute carrier family 50 (sugar efflux transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-050220-11]
95. st6gal2 st6gal2 1570 0.757 - 0.757 - - - - - - -
96. atg16l1 ENSDARG00000099430 924 0.755 - - - - - - - 0.755 - ATG16 autophagy related 16-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-401]
97. rab6a ENSDARG00000103714 1027 0.754 - 0.754 - - - - - - - RAB6A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2849]
98. n4bp1 ENSDARG00000057491 236 0.754 - - - - - - 0.754 - - nedd4 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5538]
99. btbd11b ENSDARG00000063040 254 0.752 - 0.752 - - - - - - - BTB (POZ) domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-050419-99]
100. asah1a ENSDARG00000037091, ENSDARG00000112187 390 0.751 - 0.751 - - - - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]

There are 171 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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