Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptbp3

Gene Name Gene ID Reads Annotation
ptbp3 ENSDARG00000043757 6760 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]










Genes with expression patterns similar to ptbp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptbp3 ENSDARG00000043757 6760 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
2. esrp1 ENSDARG00000011245 2097 2.651 - 0.977 - - - - 0.785 - 0.889 epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
3. ppig ENSDARG00000044431 3427 2.59 0.895 - - - - - 0.787 - 0.908 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
4. tpd52l2b ENSDARG00000013655 9460 2.511 - 0.853 - - - 0.754 - - 0.904 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
5. rcor1 ENSDARG00000031434 2733 2.427 0.931 - - - - 0.732 0.764 - - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
6. cnn3a ENSDARG00000099510 6063 2.302 - - - - - 0.857 0.727 - 0.718 calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
7. atf4b1 atf4b1 17316 2.288 0.738 - - - - 0.778 - - 0.772
8. st13 ENSDARG00000021973 7787 2.191 - - - - - 0.702 0.707 - 0.782 ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
9. pfkfb3 ENSDARG00000001953 656 1.926 0.937 0.989 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
10. rgs12b ENSDARG00000036774 5088 1.918 0.927 0.991 - - - - - - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
11. map1lc3b ENSDARG00000101127 3958 1.894 0.908 0.986 - - - - - - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
12. aamp ENSDARG00000045019 2818 1.887 0.908 0.979 - - - - - - - angio-associated, migratory cell protein [Source:ZFIN;Acc:ZDB-GENE-040426-2370]
13. im:7136729 im:7136729 1625 1.874 - 0.982 - - - - - - 0.892
14. pikfyve ENSDARG00000056112 1583 1.872 0.906 0.966 - - - - - - - phosphoinositide kinase, FYVE finger containing [Source:ZFIN;Acc:ZDB-GENE-030131-9636]
15. stxbp5b ENSDARG00000029234 760 1.858 - 0.987 - - - - - - 0.871 syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
16. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.854 - 0.970 - - - - - - 0.884
17. gmppb ENSDARG00000017658 3484 1.853 - 0.971 - - - - 0.882 - - GDP-mannose pyrophosphorylase B [Source:ZFIN;Acc:ZDB-GENE-040801-234]
18. slc1a5 ENSDARG00000099186 7580 1.847 - 0.996 - - - - - - 0.851 solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
19. eif4ebp2 ENSDARG00000031819 13168 1.841 - 0.977 - - - 0.864 - - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
20. psmd14 ENSDARG00000063100 15711 1.833 - 0.979 - - - - - - 0.854 proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
21. hnrnpk ENSDARG00000018914 8841 1.827 - 0.913 - - - - - - 0.914 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
22. npepl1 ENSDARG00000012871 3064 1.823 0.922 - - - - - 0.901 - - aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-177]
23. tmem176l.4 ENSDARG00000074390 1886 1.818 - 0.946 - - - - 0.872 - - transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
24. mboat2a ENSDARG00000031845 1255 1.808 0.941 - - - - - 0.867 - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
25. USO1 ENSDARG00000019581 1617 1.795 - 0.977 - - - - 0.818 - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
26. OMG OMG 1202 1.789 - 0.969 - - - - 0.820 - -
27. sar1b ENSDARG00000103403 1699 1.778 - 0.974 - - - - 0.804 - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
28. myeov2 3351 1.777 0.911 - - - - - 0.866 - - myeloma overexpressed 2
29. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.773 - 0.941 - - - 0.832 - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
30. aqp3a ENSDARG00000003808 9044 1.769 - 0.956 - - - - 0.813 - - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
31. rerea ENSDARG00000077353 4162 1.756 - 0.988 - - - - 0.768 - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
32. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.753 0.921 - - - - - 0.832 - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
33. padi2 ENSDARG00000044167 6765 1.751 - 0.963 - - - - 0.788 - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
34. fermt2 ENSDARG00000020242 9351 1.751 - 0.933 - - - - - - 0.818 fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
35. znhit1 ENSDARG00000054574 979 1.746 - 0.979 - - - - 0.767 - - zinc finger, HIT-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-272]
36. spata13 ENSDARG00000062837 5330 1.745 0.944 - - - - - 0.801 - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
37. gnb1b ENSDARG00000104372 1077 1.745 - - - - - - 0.869 - 0.876 guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
38. agpat4 ENSDARG00000069044 4487 1.744 0.932 - - - - - 0.812 - - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
39. sult1st4 ENSDARG00000003181 540 1.741 - 0.987 - - - - 0.754 - - sulfotransferase family 1, cytosolic sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2054]
40. appl1 1019 1.74 - 0.989 - - - - 0.751 - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
41. egfra ENSDARG00000013847 2912 1.739 0.923 - - - - - 0.816 - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
42. tpst1 ENSDARG00000073872 2490 1.737 - 0.987 - - - - 0.750 - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
43. si:dkey-9i23.11 si:dkey-9i23.11 3818 1.736 - 0.985 - - - - 0.751 - -
44. tmem258 ENSDARG00000078785 9578 1.731 0.923 - - - - - 0.808 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
45. SH3D21 ENSDARG00000099448 1726 1.73 - 0.985 - - - - 0.745 - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
46. aim1a 2981 1.725 0.925 - - - - - 0.800 - - crystallin beta-gamma domain containing 1a, transcript variant X1
47. atp2b4 5891 1.722 0.917 - - - - - 0.805 - - ATPase, Ca++ transporting, plasma membrane 4
48. skia ENSDARG00000042151 1850 1.72 0.952 - - - - - 0.768 - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
49. GCA GCA 5211 1.713 0.876 - - - - - 0.837 - -
50. sult6b1 ENSDARG00000086826 2070 1.712 0.930 - - - - - 0.782 - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
51. ppp2r2d ENSDARG00000102009 5710 1.712 - - - - - 0.842 - - 0.870 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
52. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.709 0.945 - - - - - 0.764 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
53. cox7a3 20842 1.703 0.772 0.931 - - - - - - - cytochrome c oxidase subunit VIIa polypeptide 3
54. mtpn ENSDARG00000104018 4264 1.703 - 0.991 - - - - 0.712 - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
55. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 1.699 - 0.987 - - - - 0.712 - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
56. rtf1 ENSDARG00000008947 6596 1.697 - 0.952 - - - 0.745 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
57. pfdn4 ENSDARG00000061228 8266 1.695 0.791 0.904 - - - - - - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
58. rbm8a ENSDARG00000016516 8789 1.695 0.875 - - - - - 0.820 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
59. cd2ap ENSDARG00000015224 2830 1.695 - 0.967 - - - - 0.728 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
60. COL7A1 ENSDARG00000021720 2210 1.693 - 0.970 - - - 0.723 - - - collagen, type VII, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2427]
61. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 1.692 0.931 - - - - - - - 0.761 cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
62. ccm2 ENSDARG00000013705 3464 1.692 - 0.974 - - - - 0.718 - - CCM2 scaffold protein [Source:ZFIN;Acc:ZDB-GENE-040712-6]
63. rftn2 ENSDARG00000056078 1449 1.69 - - - - - - 0.793 - 0.897 raftlin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2760]
64. capn2b ENSDARG00000055592 5431 1.685 - 0.981 - - - - 0.704 - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
65. mier1b ENSDARG00000001447 1680 1.682 0.933 - - - - - 0.749 - - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
66. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.68 0.925 - - - - - 0.755 - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
67. pgrmc1 ENSDARG00000054172 5423 1.678 0.898 - - - - - 0.780 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
68. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 1.676 - 0.976 - - - - 0.700 - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
69. wipi1 ENSDARG00000040657 2732 1.675 0.935 - - - - - - - 0.740 WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
70. reep3 reep3 2536 1.671 0.921 - - - - - 0.750 - -
71. gpc1b ENSDARG00000090585 1393 1.662 - - - - - - 0.772 - 0.890 glypican 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1306]
72. atf6 ENSDARG00000012656 3873 1.662 - - - - - 0.748 - - 0.914 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
73. s100v1 ENSDARG00000070427 6633 1.656 0.872 - - - - - 0.784 - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
74. nup188 ENSDARG00000030022 2398 1.653 - - - - - - 0.734 - 0.919 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
75. si:ch211-10d23.5 ENSDARG00000095510 2632 1.645 - - - - - - 0.743 - 0.902 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
76. chmp2bb ENSDARG00000002190 4629 1.643 0.928 - - - - - 0.715 - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
77. nr2f5 ENSDARG00000033172 11808 1.643 - 0.830 - - - 0.813 - - - nuclear receptor subfamily 2, group F, member 5 [Source:ZFIN;Acc:ZDB-GENE-990415-253]
78. tsc22d2 ENSDARG00000041839 1109 1.642 - - - - - - 0.764 - 0.878 TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
79. kpna3 ENSDARG00000052641 5347 1.641 - - - - - - 0.771 - 0.870 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
80. tmed1a ENSDARG00000031325 1936 1.628 - 0.918 - - - - 0.710 - - transmembrane p24 trafficking protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-229]
81. KANSL1_1 KANSL1_1 1809 1.627 - - - - - - 0.711 - 0.916
82. commd4 ENSDARG00000061946 3281 1.623 - - - - - - 0.740 - 0.883 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
83. lman2 ENSDARG00000061854 6251 1.62 - - - - - - 0.704 - 0.916 lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
84. pfn2 ENSDARG00000003952 26209 1.62 0.885 - - - - - - - 0.735 profilin 2 [Source:ZFIN;Acc:ZDB-GENE-040115-4]
85. brd4 ENSDARG00000078904 5367 1.616 - - - - - - 0.771 - 0.845 bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
86. rnf10 ENSDARG00000079687 6768 1.615 - 0.852 - - - 0.763 - - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
87. bcap31 ENSDARG00000044972 8708 1.609 - - - - - - 0.707 - 0.902 B cell receptor associated protein 31 [Source:ZFIN;Acc:ZDB-GENE-030616-63]
88. zgc:112484 zgc:112484 780 1.604 - - - - - - 0.736 - 0.868
89. tmpoa ENSDARG00000007315 3638 1.603 - - - - - - 0.708 - 0.895 thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
90. hsbp1b ENSDARG00000041921 6170 1.589 - - - - - - 0.713 - 0.876 heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
91. PARD3B_1 PARD3B_1 1735 1.588 - - - - - - 0.714 - 0.874
92. nt5c1bb ENSDARG00000033742 1248 1.588 - - - - - - 0.707 - 0.881 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
93. si:ch211-191j22.3 ENSDARG00000095459 959 1.587 - - - - - - 0.718 - 0.869 si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
94. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.586 - - - - - - 0.705 - 0.881 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
95. tpm4a ENSDARG00000023963 10932 1.586 - 0.865 - - - 0.721 - - - tropomyosin 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2185]
96. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.581 0.857 - - - - - - - 0.724 ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
97. gng5 ENSDARG00000039830 12102 1.576 - - - - - 0.715 0.861 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
98. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 1.567 - - - - - - 0.711 - 0.856 Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
99. ywhabl ENSDARG00000040287 39045 1.563 0.859 - - - - - 0.704 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
100. tma7 ENSDARG00000071670 13372 1.56 - 0.809 - - - - 0.751 - - translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]

There are 1377 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA