Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prf1.3

Gene Name Gene ID Reads Annotation
prf1.3 ENSDARG00000001572 1 perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]










Genes with expression patterns similar to prf1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. znf142 ENSDARG00000061373 47 1 1.000 - - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
2. si:dkey-56m15.8 ENSDARG00000098426 2 1 1.000 - - - - - - - - si:dkey-56m15.8 [Source:ZFIN;Acc:ZDB-GENE-110914-109]
3. lcn15 ENSDARG00000067851 140 1 1.000 - - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
4. si:dkey-284p5.3 ENSDARG00000095638 4 1 1.000 - - - - - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
5. MUC5AC_1 MUC5AC_1 381 1 1.000 - - - - - - - -
6. FP085392.1 FP085392.1 12 1 1.000 - - - - - - - -
7. APEX2 ENSDARG00000008472 7 1 1.000 - - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
8. shpk ENSDARG00000002355 84 1 1.000 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
9. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 1.000 - - - - - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
10. ENSDARG00000029805 ENSDARG00000029805 4 1 1.000 - - - - - - - -
11. zbtb25 ENSDARG00000042383 94 1 1.000 - - - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
12. sema6e ENSDARG00000000189 35 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
13. pias4b ENSDARG00000042215 12 1 1.000 - - - - - - - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
14. HBQ1 HBQ1 413 1 1.000 - - - - - - - -
15. si:dkey-16n15.6 ENSDARG00000095805 18 1 1.000 - - - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
16. BX571880.1 ENSDARG00000097533 499 1 1.000 - - - - - - - -
17. MPZL2 MPZL2 31 1 1.000 - - - - - - - -
18. rxrga ENSDARG00000005593 342 1 1.000 - - - - - - - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
19. mpx ENSDARG00000019521 562 1 1.000 - - - - - - - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
20. cdkn1bb_1 ENSDARG00000054271 5 1 1.000 - - - - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
21. fermt3b ENSDARG00000030938 17 1 1.000 - - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
22. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 1.000 - - - - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
23. si:ch211-73m21.2 si:ch211-73m21.2 5 1 1.000 - - - - - - - -
24. prf1.3 ENSDARG00000001572 1 1 1.000 - - - - - - - - perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]
25. si:ch211-155o21.4 ENSDARG00000096567 25 1 1.000 - - - - - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
26. fgf10b ENSDARG00000100475 17 1 1.000 - - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
27. si:dkey-58b18.10 ENSDARG00000109911, ENSDARG00000113007, ENSDARG00000116868 4 1 1.000 - - - - - - - - si:dkey-58b18.10 [Source:ZFIN;Acc:ZDB-GENE-070912-560]
28. CABZ01080224.1 CABZ01080224.1 1 1 1.000 - - - - - - - -
29. SMCHD1 ENSDARG00000104374 2 1 1.000 - - - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
30. ME1 ENSDARG00000053215 8 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
31. dnm3 dnm3 45 1 1.000 - - - - - - - -
32. gpr39 ENSDARG00000102888 46 1 1.000 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
33. FP102192.1 ENSDARG00000101104 32 1 1.000 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
34. arid5a ENSDARG00000077120 26 1 1.000 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
35. si:dkey-30j10.5 ENSDARG00000093186 13 1 1.000 - - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
36. epm2a ENSDARG00000059044 10 1 1.000 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
37. nrros ENSDARG00000071491, ENSDARG00000112102 64 1 1.000 - - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
38. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 1.000 - - - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
39. prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 1 1.000 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
40. FP236851.1 FP236851.1 10 1 1.000 - - - - - - - -
41. or137-1 ENSDARG00000105789 2 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
42. si:dkey-269o24.7 si:dkey-269o24.7 28 1 1.000 - - - - - - - -
43. CR749741.2 CR749741.2 15 1 1.000 - - - - - - - -
44. snrnp35 ENSDARG00000099913 21 1 1.000 - - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
45. si:dkey-100h21.2 si:dkey-100h21.2 30 1 1.000 - - - - - - - -
46. SFT2D2_1 SFT2D2_1 219 1 1.000 - - - - - - - -
47. GPBAR1 ENSDARG00000023302 2 1 1.000 - - - - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
48. HIST1H2BA_1 ENSDARG00000116654 37 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
49. SNORA62 SNORA62 39 1 1.000 - - - - - - - -
50. si:dkey-256e7.8 ENSDARG00000092022 4 1 1.000 - - - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
51. ENSDARG00000091766 ENSDARG00000091766 15 1 1.000 - - - - - - - -
52. SLC28A2 SLC28A2 21 1 1.000 - - - - - - - -
53. btk ENSDARG00000004433 106 1 1.000 - - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
54. dock1 ENSDARG00000099093 10 1 1.000 - - - - - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
55. SBK3_1 SBK3_1 21 1 1.000 - - - - - - - -
56. CU638737.1 CU638737.1 17 1 1.000 - - - - - - - -
57. NXPH4 11 1 1.000 - - - - - - - - neurexophilin 4
58. si:dkey-202i12.5 si:dkey-202i12.5 20 1 1.000 - - - - - - - -
59. prkacbb_1 ENSDARG00000059125 83 1 1.000 - - - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
60. si:ch73-290k24.5 ENSDARG00000076310 39 1 1.000 - - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
61. glrba ENSDARG00000052782, ENSDARG00000117018 4 1 1.000 - - - - - - - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
62. si:ch211-106g4.2 si:ch211-106g4.2 6 1 1.000 - - - - - - - -
63. card9 ENSDARG00000067672 33 1 1.000 - - - - - - - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
64. si:ch211-227p7.5 ENSDARG00000099046 1 1 1.000 - - - - - - - - si:ch211-227p7.5 [Source:ZFIN;Acc:ZDB-GENE-120703-10]
65. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 1.000 - - - - - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
66. CU896555.1 CU896555.1 27 1 1.000 - - - - - - - -
67. si:ch211-255g12.8 ENSDARG00000069627 22 1 1.000 - - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
68. TOR4A TOR4A 70 1 1.000 - - - - - - - -
69. si:dkey-54i3.2 si:dkey-54i3.2 1 1 1.000 - - - - - - - -
70. cart1 ENSDARG00000070930 46 1 1.000 - - - - - - - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
71. crha ENSDARG00000093401 1 1 1.000 - - - - - - - - corticotropin releasing hormone a [Source:ZFIN;Acc:ZDB-GENE-070912-371]
72. thap7 ENSDARG00000070704 225 1 1.000 - - - - - - - - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
73. cdk4 ENSDARG00000087937 80 1 1.000 - - - - - - - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
74. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1 1.000 - - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
75. CU013533.1 CU013533.1 108 1 1.000 - - - - - - - -
76. si:dkey-241l7.5 ENSDARG00000088989 6 1 1.000 - - - - - - - - si:dkey-241l7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-237]
77. zgc:165627 zgc:165627 4 1 1.000 - - - - - - - -
78. CABZ01048021.1 CABZ01048021.1 15 1 1.000 - - - - - - - -
79. CT583679.2 CT583679.2 10 1 1.000 - - - - - - - -
80. si:ch211-223f7.1 si:ch211-223f7.1 38 1 1.000 - - - - - - - -
81. si:dkey-253d23.1 si:dkey-253d23.1 2 1 1.000 - - - - - - - -
82. tek ENSDARG00000028663 167 0.995 0.995 - - - - - - - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
83. zgc:162612 ENSDARG00000079699 244 0.988 0.988 - - - - - - - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
84. zgc:113426 ENSDARG00000051793 37 0.983 0.983 - - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
85. smyd4 ENSDARG00000060983 106 0.981 0.981 - - - - - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
86. LARP4 LARP4 48 0.981 0.981 - - - - - - - -
87. mir451a 131 0.981 0.981 - - - - - - - - microRNA 451a
88. rhd ENSDARG00000002194 269 0.98 0.980 - - - - - - - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
89. zgc:110782 ENSDARG00000044544 48 0.979 0.979 - - - - - - - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
90. si:dkey-20i20.11 ENSDARG00000101885 17 0.979 0.979 - - - - - - - - si:dkey-20i20.11 [Source:ZFIN;Acc:ZDB-GENE-060503-58]
91. adamts8a ENSDARG00000007709 75 0.965 0.965 - - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 8a [Source:ZFIN;Acc:ZDB-GENE-060526-202]
92. TESK1 TESK1 109 0.962 0.962 - - - - - - - -
93. si:ch211-235f12.2 ENSDARG00000092119 31 0.956 0.956 - - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
94. adra1d ENSDARG00000024101 387 0.953 0.953 - - - - - - - - adrenoceptor alpha 1D [Source:ZFIN;Acc:ZDB-GENE-090312-203]
95. NRBP2 NRBP2 127 0.946 0.946 - - - - - - - -
96. MAZ MAZ 42 0.946 0.946 - - - - - - - -
97. si:ch211-209j10.5 si:ch211-209j10.5 13 0.946 0.946 - - - - - - - -
98. si:dkey-76d14.2 ENSDARG00000093458 11 0.946 0.946 - - - - - - - - si:dkey-76d14.2 [Source:ZFIN;Acc:ZDB-GENE-070912-580]
99. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 0.946 0.946 - - - - - - - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
100. nsun3 ENSDARG00000013023 136 0.945 0.945 - - - - - - - - NOP2/Sun domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050706-95]

There are 223 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA