Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pms2

Gene Name Gene ID Reads Annotation
pms2 ENSDARG00000075672, ENSDARG00000115929 248 PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]










Genes with expression patterns similar to pms2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pms2 ENSDARG00000075672, ENSDARG00000115929 248 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
2. FP236789.1 ENSDARG00000105406 57 2.693 0.898 - - - - - 0.853 0.942 -
3. gpr161 ENSDARG00000055659 454 2.414 - - - 0.708 - 0.869 - 0.837 - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
4. dbpb ENSDARG00000057652, ENSDARG00000116703 71 1.855 0.939 - - - - - - 0.916 - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
5. atp8a1 ENSDARG00000063001 146 1.834 - 0.904 - - - - - 0.930 - ATPase phospholipid transporting 8A1 [Source:ZFIN;Acc:ZDB-GENE-060929-36]
6. GPR180 73 1.831 0.989 - - - - - 0.842 - - G protein-coupled receptor 180, transcript variant X2
7. ndufa13 160 1.793 0.863 0.930 - - - - - - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
8. cbln4 ENSDARG00000061240 67 1.785 - 0.819 - - - - - 0.966 - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
9. efhc2 ENSDARG00000004204 59 1.759 - 0.815 - - - - 0.944 - - EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]
10. CABZ01071530.2 CABZ01071530.2 47 1.757 - 0.864 - - - - - 0.893 -
11. PRODH PRODH 13 1.729 - 0.819 - - - - 0.910 - -
12. C14H5orf45 C14H5orf45 83 1.728 - 0.819 - - - - - 0.909 -
13. hrasb ENSDARG00000005651 662 1.726 0.835 - - - - - - 0.891 - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
14. si:ch73-389k6.1 ENSDARG00000103186 296 1.706 - - - 0.876 - - 0.830 - - si:ch73-389k6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-408]
15. si:dkey-111e8.5 ENSDARG00000093960 28 1.695 - 0.905 - - - - 0.790 - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
16. ap4b1 ENSDARG00000013726 382 1.691 0.959 0.732 - - - - - - - adaptor related protein complex 4 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1284]
17. cttnbp2nl cttnbp2nl 166 1.69 - 0.772 - - - - - 0.918 -
18. pigs ENSDARG00000017813 718 1.689 0.770 - - - - - - 0.919 - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
19. AK9 ENSDARG00000021913 53 1.686 - 0.853 - - - - 0.833 - - adenylate kinase 9 [Source:ZFIN;Acc:ZDB-GENE-041014-337]
20. slc13a5 slc13a5 15 1.676 - 0.864 - - - - 0.812 - -
21. utp23 ENSDARG00000105012 1346 1.664 0.789 - - 0.875 - - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
22. SLC41A2 SLC41A2 202 1.659 0.893 - - - - - 0.766 - -
23. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 1.643 - 0.732 - - - - - 0.911 - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
24. ccdc151 ENSDARG00000062978, ENSDARG00000113033 316 1.64 - - - - - - 0.716 0.924 - coiled-coil domain containing 151 [Source:ZFIN;Acc:ZDB-GENE-061013-787]
25. BX072576.1 ENSDARG00000078204 12 1.632 - 0.819 - - - 0.813 - - - beta-2 adrenergic receptor-like [Source:NCBI gene;Acc:101885642]
26. atpaf2 ENSDARG00000056270, ENSDARG00000115757 658 1.624 - - - - - - 0.750 0.874 - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]
27. ssna1 ENSDARG00000101300 403 1.618 0.912 - - - - - 0.706 - - Sjogren syndrome nuclear autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-081104-255]
28. pigu ENSDARG00000075530 348 1.616 - - - - - - 0.753 0.863 - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
29. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1.599 - 0.819 - - - - 0.780 - -
30. zgc:173726 ENSDARG00000077078 250 1.599 - - - 0.775 - - 0.824 - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
31. KCNAB3 KCNAB3 134 1.591 0.772 0.819 - - - - - - -
32. TKT TKT 298 1.584 - 0.853 - 0.731 - - - - -
33. pear1 ENSDARG00000060753 173 1.556 - - - 0.705 - - 0.851 - - platelet endothelial aggregation receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091230-1]
34. mettl3 ENSDARG00000012827 728 1.555 0.745 - - - - - 0.810 - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
35. BX927064.1 BX927064.1 46 1.545 - 0.819 - - - 0.726 - - -
36. si:dkeyp-73a2.2 ENSDARG00000079785 313 1.538 - 0.743 - - - - 0.795 - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
37. STARD5 ENSDARG00000076117 251 1.532 0.750 - - 0.782 - - - - - StAR-related lipid transfer (START) domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-130103-4]
38. tmeff2b ENSDARG00000058699 82 1.525 - - - - - 0.740 0.785 - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
39. si:ch73-196k8.2 si:ch73-196k8.2 427 1.525 0.815 - - - - - 0.710 - -
40. ENSDARG00000074705 ENSDARG00000074705 507 1.521 0.748 - - 0.773 - - - - -
41. aqp8b_1 ENSDARG00000089749 586 1.518 - 0.723 - - - - 0.795 - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
42. angel2 ENSDARG00000016743 322 1.508 0.733 - - - - - - 0.775 - angel homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6498]
43. phyh ENSDARG00000086740 88 1.505 - 0.764 - 0.741 - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
44. lysmd3 ENSDARG00000024693 754 1.489 0.721 - - - - - - 0.768 - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
45. CABZ01084942.1 ENSDARG00000100332 69 1.481 0.765 - - - - - 0.716 - -
46. OAF OAF 459 1.473 0.714 - - - - - - 0.759 -
47. AL935046.1 AL935046.1 89 1.454 - 0.701 - - - - 0.753 - -
48. cspg5b ENSDARG00000099793 67 1 1.000 - - - - - - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
49. rorb ENSDARG00000033498 544 1 - 1.000 - - - - - - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
50. lipt2 ENSDARG00000069852 14 0.989 0.989 - - - - - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
51. CR381673.1 ENSDARG00000098337 7 0.989 0.989 - - - - - - - -
52. ZNF337_17 ZNF337_17 12 0.989 0.989 - - - - - - - -
53. CREB3L3 CREB3L3 24 0.989 0.989 - - - - - - - -
54. emx3 ENSDARG00000020417 85 0.989 0.989 - - - - - - - - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
55. RAB38 122 0.989 0.989 - - - - - - - - RAB38, member RAS oncogene family
56. lrrc4.2 ENSDARG00000003020 235 0.989 0.989 - - - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
57. zgc:173837 ENSDARG00000076949 24 0.989 0.989 - - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
58. si:ch73-138i16.1 ENSDARG00000095562 8 0.989 0.989 - - - - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
59. CT573256.1 ENSDARG00000091657 18 0.989 0.989 - - - - - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
60. CU929356.4 CU929356.4 86 0.989 0.989 - - - - - - - -
61. igsf5 igsf5 85 0.989 0.989 - - - - - - - -
62. fasn_1 ENSDARG00000087657 31 0.989 0.989 - - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
63. MUC5AC MUC5AC 32 0.989 0.989 - - - - - - - -
64. SNORD38 SNORD38 171 0.989 0.989 - - - - - - - -
65. AL928712.1 AL928712.1 101 0.989 0.989 - - - - - - - -
66. si:ch211-242f23.8 ENSDARG00000087585 22 0.989 0.989 - - - - - - - - si:ch211-242f23.8 [Source:ZFIN;Acc:ZDB-GENE-091204-11]
67. crybb3 ENSDARG00000041301 48 0.989 0.989 - - - - - - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
68. dao.3 ENSDARG00000035601 15 0.989 0.989 - - - - - - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
69. Metazoa_SRP_18 Metazoa_SRP_18 4 0.989 0.989 - - - - - - - -
70. BX908804.1 ENSDARG00000002797 4 0.989 0.989 - - - - - - - -
71. TULP2 TULP2 38 0.989 0.989 - - - - - - - -
72. si:dkey-197d18.1 si:dkey-197d18.1 4 0.989 0.989 - - - - - - - -
73. si:dkey-13n15.2 ENSDARG00000061806, ENSDARG00000094417 4 0.989 0.989 - - - - - - - - si:dkey-13n15.2 [Source:ZFIN;Acc:ZDB-GENE-060526-209]
74. vil1 ENSDARG00000040466 81 0.989 0.989 - - - - - - - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
75. si:dkey-199f5.6 ENSDARG00000094400 51 0.989 0.989 - - - - - - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
76. CR848761.1 CR848761.1 4 0.989 0.989 - - - - - - - -
77. si:ch211-76m11.15 ENSDARG00000098979 6 0.989 0.989 - - - - - - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
78. SYTL1 ENSDARG00000070094 282 0.989 0.989 - - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
79. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.989 0.989 - - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
80. slc24a4b ENSDARG00000067509 33 0.989 0.989 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
81. sntg2 ENSDARG00000101660 19 0.989 0.989 - - - - - - - - syntrophin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-060526-196]
82. si:ch211-67f13.7 ENSDARG00000077845 8 0.989 0.989 - - - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
83. fam101a 4 0.989 0.989 - - - - - - - - family with sequence similarity 101, member A
84. ZNF648 ENSDARG00000104823 194 0.989 0.989 - - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
85. PRKCA_1 ENSDARG00000099841 12 0.989 0.989 - - - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
86. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.983 0.983 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
87. si:ch211-110e4.2 si:ch211-110e4.2 12 0.981 0.981 - - - - - - - -
88. AP5B1 ENSDARG00000078805 62 0.981 0.981 - - - - - - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
89. gcdhl gcdhl 38 0.981 0.981 - - - - - - - -
90. grk7b ENSDARG00000055534 17 0.981 0.981 - - - - - - - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
91. zgc:113443 359 0.98 0.980 - - - - - - - - zgc:113443, transcript variant X3
92. C25H12orf29 C25H12orf29 31 0.979 0.979 - - - - - - - -
93. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.979 0.979 - - - - - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
94. zgc:172106 ENSDARG00000017984 90 0.978 0.978 - - - - - - - - zgc:172106 [Source:ZFIN;Acc:ZDB-GENE-080204-42]
95. FAM163A ENSDARG00000093021 86 0.976 0.976 - - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
96. eng2a eng2a 186 0.975 0.975 - - - - - - - -
97. PLLP ENSDARG00000062756, ENSDARG00000109949 114 0.975 0.975 - - - - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
98. otc ENSDARG00000062147 95 0.975 0.975 - - - - - - - - ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
99. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 0.975 0.975 - - - - - - - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
100. CABZ01054965.1 ENSDARG00000090844 74 0.973 0.973 - - - - - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]

There are 1358 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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