Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pcm1

Gene Name Gene ID Reads Annotation
pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]










Genes with expression patterns similar to pcm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
2. efnb3b ENSDARG00000042277 5823 2.687 - - - - 0.955 - 0.741 - 0.991 ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
3. meaf6 ENSDARG00000101216 6865 1.79 - - - - - - 0.798 - 0.992 MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
4. snrnp27 ENSDARG00000035625 9080 1.778 - - - - 0.780 - - - 0.998 small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
5. bin3 ENSDARG00000099651 3295 1.715 - 0.717 - - - - - - 0.998 bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
6. cenpf ENSDARG00000055133 5267 1.701 - 0.704 - - - - - - 0.997 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
7. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.701 - - - - - - 0.722 - 0.979 TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
8. rbpja ENSDARG00000003398 1309 1.651 - - - - 0.844 - 0.807 - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
9. mrgbp ENSDARG00000028894, ENSDARG00000110790 1316 1.613 - - - 0.779 0.834 - - - - MRG/MORF4L binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1698]
10. itm2ca ENSDARG00000043448 1265 1.594 - - - 0.753 0.841 - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
11. eif3d ENSDARG00000021257 1524 1.594 - - - - 0.839 0.755 - - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
12. RFX7 885 1.59 - - - 0.749 - - - 0.841 - regulatory factor X, 7
13. tanc2 tanc2 804 1.589 - 0.769 - - - - - 0.820 -
14. lrrc47 ENSDARG00000053138 417 1.581 - - 0.706 0.875 - - - - - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
15. axin1 ENSDARG00000102964 1710 1.579 0.838 - - - - 0.741 - - - axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
16. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.571 - - - - 0.834 - - 0.737 - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
17. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.56 - - - - 0.840 - - 0.720 - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
18. tmem198a ENSDARG00000042115 1694 1.557 - 0.743 - - 0.814 - - - - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
19. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.549 - - - - 0.835 - 0.714 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
20. mpp5a ENSDARG00000006272 1181 1.544 - - - 0.827 - - 0.717 - - membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5) [Source:ZFIN;Acc:ZDB-GENE-020712-1]
21. psmd13 ENSDARG00000016239 4229 1.533 - - - - - - 0.758 0.775 - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
22. slc25a32a ENSDARG00000089791 511 1.516 - 0.740 - - - - - 0.776 - solute carrier family 25 (mitochondrial folate carrier), member 32a [Source:ZFIN;Acc:ZDB-GENE-040426-758]
23. cars ENSDARG00000036164 2019 1.511 - 0.732 - 0.779 - - - - - cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
24. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.499 - 0.739 - - - - 0.760 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
25. si:dkey-42i9.4 ENSDARG00000008049 4752 1.493 - - 0.710 - 0.783 - - - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
26. CABZ01080116.1 CABZ01080116.1 407 1.492 - - - - - - 0.737 0.755 -
27. pacs1a ENSDARG00000044556, ENSDARG00000117043 914 1.491 - 0.728 - - - 0.763 - - - phosphofurin acidic cluster sorting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050208-244]
28. hnrnpk ENSDARG00000018914 8841 1.454 - - - - 0.739 - 0.715 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
29. rp9 ENSDARG00000098942 3172 1.412 - - - - 0.703 - 0.709 - - RP9, pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-42]
30. lemd3 ENSDARG00000015824 2868 0.999 - - - - - - - - 0.999 LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
31. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 0.998 - - - - - - - - 0.998 atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
32. ATP10B ENSDARG00000076230 989 0.998 - - - - - - - - 0.998 ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
33. SHROOM2 SHROOM2 934 0.998 - - - - - - - - 0.998
34. snapin ENSDARG00000062382 1531 0.998 - - - - - - - - 0.998 SNAP-associated protein [Source:ZFIN;Acc:ZDB-GENE-060503-343]
35. kif3cb ENSDARG00000079500 935 0.998 - - - - - - - - 0.998 kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
36. fam50a ENSDARG00000024895 3020 0.998 - - - - - - - - 0.998 family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
37. mkln1 ENSDARG00000025576 1122 0.998 - - - - - - - - 0.998 muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
38. IGLON5 ENSDARG00000022176 1353 0.998 - - - - - - - - 0.998 IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
39. ptrhd1 ENSDARG00000016122 2705 0.998 - - - - - - - - 0.998 peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
40. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.998 - - - - - - - - 0.998 interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
41. asb4 ENSDARG00000034988 1115 0.998 - - - - - - - - 0.998 ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
42. atg5 ENSDARG00000023396 1726 0.998 - - - - - - - - 0.998 ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
43. CT955984.1 ENSDARG00000113577 1482 0.998 - - - - - - - - 0.998
44. arl8bb ENSDARG00000070318 1428 0.998 - - - - - - - - 0.998 ADP-ribosylation factor-like 8Bb [Source:ZFIN;Acc:ZDB-GENE-080516-10]
45. pigk ENSDARG00000024479 1386 0.998 - - - - - - - - 0.998 phosphatidylinositol glycan anchor biosynthesis, class K [Source:ZFIN;Acc:ZDB-GENE-040625-162]
46. slc37a4a ENSDARG00000038106 1375 0.998 - - - - - - - - 0.998 solute carrier family 37 (glucose-6-phosphate transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2230]
47. FRMD4A ENSDARG00000042249 2883 0.997 - - - - - - - - 0.997 FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
48. zgc:162608 ENSDARG00000069375 2881 0.997 - - - - - - - - 0.997 zgc:162608 [Source:ZFIN;Acc:ZDB-GENE-070410-86]
49. NEDD4 NEDD4 2040 0.997 - - - - - - - - 0.997
50. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.997 - - - - - - - - 0.997 RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
51. mrpl12 ENSDARG00000038768 5539 0.997 - - - - - - - - 0.997 mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
52. rufy3 ENSDARG00000029692 3031 0.997 - - - - - - - - 0.997 RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
53. palld ENSDARG00000040009 2381 0.997 - - - - - - - - 0.997 palladin, cytoskeletal associated protein [Source:ZFIN;Acc:ZDB-GENE-041014-252]
54. TMEM254 ENSDARG00000109902 3377 0.997 - - - - - - - - 0.997 transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
55. cdc25 cdc25 3913 0.997 - - - - - - - - 0.997
56. psma6b ENSDARG00000013966 4410 0.997 - - - - - - - - 0.997 proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
57. txndc17 ENSDARG00000058079 3533 0.997 - - - - - - - - 0.997 thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
58. si:ch211-262h13.3 ENSDARG00000070898 2094 0.997 - - - - - - - - 0.997 si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
59. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 0.996 - - - - - - - - 0.996 nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
60. fam105bb fam105bb 1253 0.996 - - - - - - - - 0.996
61. chchd3 chchd3 4139 0.996 - - - - - - - - 0.996
62. sf3b5 ENSDARG00000016855 4015 0.995 - - - - - - - - 0.995 splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
63. nipblb ENSDARG00000061052 6109 0.995 - - - - - - - - 0.995 nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
64. gpx4b ENSDARG00000076836 8085 0.994 - - - - - - - - 0.994 glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
65. NDNF ENSDARG00000062936 7287 0.994 - - - - - - - - 0.994 neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
66. si:dkey-67c22.2 ENSDARG00000055389 6410 0.994 - - - - - - - - 0.994 si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
67. nup50 ENSDARG00000017454 4425 0.993 - - - - - - - - 0.993 nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
68. lyrm2 ENSDARG00000033138 5597 0.992 - - - - - - - - 0.992 LYR motif containing 2 [Source:ZFIN;Acc:ZDB-GENE-040914-27]
69. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 0.992 - - - - - - - - 0.992 phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
70. tmed9 ENSDARG00000004261 10013 0.991 - - - - - - - - 0.991 transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
71. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 0.991 - - - - - - - - 0.991 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
72. idh3g ENSDARG00000023648 4877 0.989 - - - - - - - - 0.989 isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
73. enpp1 ENSDARG00000005789 3267 0.982 - - - - - - - - 0.982 ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
74. bcat2 ENSDARG00000054849 4317 0.982 - - - - 0.982 - - - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
75. zgc:77086 ENSDARG00000014015 4908 0.981 - - - - - - - - 0.981 zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
76. rd3 ENSDARG00000031600 1085 0.981 - - - - - - - - 0.981 retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
77. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 0.981 - - - - - - - - 0.981 HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
78. adnp2b ENSDARG00000028431 4683 0.98 - - - - - - - - 0.980 ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
79. zgc:165347 zgc:165347 1358 0.98 - - - - - - - - 0.980
80. znf292b ENSDARG00000043973 3791 0.979 - - - - 0.979 - - - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
81. si:dkey-193p11.2 ENSDARG00000096712 3500 0.979 - - - - - - - - 0.979 si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
82. ylpm1 ENSDARG00000043680 7676 0.978 - - - - - - - - 0.978 YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
83. eif3s6ip ENSDARG00000101082 18515 0.976 - - - - - - - - 0.976 eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
84. histh1l ENSDARG00000035519 12293 0.976 - - - - - - - - 0.976 histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
85. atp1b3a ENSDARG00000015790 12310 0.971 - - - - - - - - 0.971 ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
86. tmem182 tmem182 12589 0.97 - - - - - - - - 0.970
87. atp6v0b ENSDARG00000031681 4611 0.968 - - - - 0.968 - - - - ATPase H+ transporting V0 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-443]
88. rtn1a ENSDARG00000006497 19339 0.955 - - - - - - - - 0.955 reticulon 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2426]
89. pcdh1gc5 ENSDARG00000104826 10052 0.951 - - - - - - - - 0.951 protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
90. aimp2 ENSDARG00000018903 5797 0.946 - - - - 0.946 - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2652]
91. eppk1 ENSDARG00000096359 4315 0.944 - - - - - - - - 0.944 epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
92. macc1 ENSDARG00000040717 1669 0.942 - - - - - - - - 0.942 metastasis associated in colon cancer 1 [Source:ZFIN;Acc:ZDB-GENE-091006-3]
93. smarca4 smarca4 9726 0.935 - - - - - - - - 0.935
94. kmt2cb ENSDARG00000075560 4816 0.929 - - - - 0.929 - - - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
95. slka ENSDARG00000061525 1678 0.926 - 0.926 - - - - - - - STE20-like kinase a [Source:ZFIN;Acc:ZDB-GENE-050411-66]
96. chd4b ENSDARG00000025789 14299 0.923 - - - - 0.923 - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
97. rps17 ENSDARG00000104011 27028 0.923 - - - - - - - - 0.923 ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
98. rad21a ENSDARG00000006092 393 0.922 - - - - - - 0.922 - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
99. dag1 ENSDARG00000016153 10886 0.914 - - - - 0.914 - - - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
100. syncrip ENSDARG00000040184 24690 0.905 - - - - - - - - 0.905 synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]

There are 845 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA