Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pcdh18b

Gene Name Gene ID Reads Annotation
pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]










Genes with expression patterns similar to pcdh18b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
2. ebf3 ebf3 4238 3.094 - - - 0.706 - - 0.792 0.883 0.713
3. LPL_1 LPL_1 1150 2.727 - - - - 0.947 - - 0.914 0.866
4. dock7 ENSDARG00000078675 1995 2.594 - - - - 0.863 - - 0.901 0.830 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
5. scn4ba ENSDARG00000099031 1634 2.509 - 0.862 - - - 0.821 0.826 - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
6. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 2.474 - - - - - 0.776 0.825 - 0.873 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
7. ank2b ENSDARG00000043313 3065 2.474 - - - - - 0.816 0.824 - 0.834 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
8. wu:fq41a10 wu:fq41a10 7009 2.432 - - - 0.782 0.926 - - 0.724 -
9. lpl ENSDARG00000087697 2578 2.419 - - - - 0.832 - 0.708 0.879 - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
10. zgc:65772 zgc:65772 2092 2.378 - - - - 0.769 - 0.710 0.899 -
11. ache ENSDARG00000031796 1985 2.354 - - - - - 0.762 0.755 0.837 - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
12. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 2.279 - - - - - 0.768 0.757 - 0.754 cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
13. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 2.27 - - - - 0.788 0.773 0.709 - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
14. msi1 ENSDARG00000010710 2634 2.243 - 0.772 0.738 - - - - - 0.733 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
15. SMAD4 SMAD4 3233 2.197 - - 0.753 0.712 - - - 0.732 -
16. znf865 ENSDARG00000036698 15532 2.19 - - - 0.781 - 0.701 0.708 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
17. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 2.179 - - - 0.732 - 0.719 0.728 - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
18. usp49 ENSDARG00000000229 706 1.843 - - - - 0.980 - - - 0.863 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
19. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.819 - - - - 0.925 - - - 0.894 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
20. GTSE1 ENSDARG00000013719 1115 1.801 - - - - 0.915 - - 0.886 - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
21. etv1 ENSDARG00000101959 358 1.8 - - - - 0.962 - - - 0.838 ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
22. BX323459.1 ENSDARG00000109508 1476 1.794 - - - - 0.959 - 0.835 - -
23. gad2 ENSDARG00000015537 724 1.787 - - - - 0.946 - - - 0.841 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
24. ulk1b ENSDARG00000074481 1212 1.785 - - - - - - 0.883 0.902 - unc-51 like autophagy activating kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071203-2]
25. get4 ENSDARG00000024398 1818 1.782 - - - - 0.899 - - 0.883 - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
26. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.782 - - - - - - - 0.895 0.887 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
27. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.782 - - - - 0.932 - - - 0.850 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
28. ube2t ENSDARG00000063285 716 1.779 - 0.843 - - 0.936 - - - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
29. nploc4 ENSDARG00000100487 1262 1.774 - - - - - - 0.897 - 0.877 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
30. wu:fj29h11 ENSDARG00000096562 863 1.772 - - - - 0.904 - - - 0.868 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
31. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.772 - 0.811 - - 0.961 - - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
32. GANAB_1 GANAB_1 685 1.772 - - - - - - - 0.913 0.859
33. melk ENSDARG00000030759 1150 1.77 - - - - 0.931 - - - 0.839 maternal embryonic leucine zipper kinase [Source:ZFIN;Acc:ZDB-GENE-990603-5]
34. st8sia2 ENSDARG00000018788 2183 1.761 - - - - 0.851 - - - 0.910 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
35. phc2b_1 ENSDARG00000013224 1316 1.76 - - - - - - - 0.883 0.877 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
36. dhdds ENSDARG00000039851 1135 1.759 - - - - 0.942 - - - 0.817 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
37. si:ch211-278j3.3 ENSDARG00000020284 478 1.759 - 0.809 - - 0.950 - - - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
38. ivns1abpb ENSDARG00000013946 1972 1.756 - - - - 0.893 - - 0.863 - influenza virus NS1A binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6266]
39. tspan5b ENSDARG00000070449 1056 1.756 - - - - 0.892 - - - 0.864 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
40. CABZ01087568.1 CABZ01087568.1 1487 1.755 - - - - 0.901 - - - 0.854
41. amer2 ENSDARG00000075222 594 1.746 - - - 0.788 0.958 - - - - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
42. si:ch211-120j21.1 si:ch211-120j21.1 638 1.742 - - - - 0.906 - 0.836 - -
43. cdk16_1 ENSDARG00000032072 2031 1.738 - - - - 0.877 - - 0.861 - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
44. casc4 ENSDARG00000074490 2019 1.734 - - - - 0.920 - - 0.814 - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
45. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 1.732 - 0.883 - - - - 0.849 - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
46. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 1.729 - 0.812 - - - - - 0.917 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
47. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.728 - - - - 0.858 - - 0.870 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
48. UTS2R 109 1.727 - 0.922 - - - - 0.805 - - urotensin 2 receptor
49. wdr59 ENSDARG00000088817 1005 1.726 - 0.782 - - 0.944 - - - - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
50. cul4b ENSDARG00000060510 6053 1.72 - - - - 0.873 - - 0.847 - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
51. si:ch211-194k22.8 ENSDARG00000096711 1318 1.72 - 0.827 - - - - - 0.893 - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
52. si:ch211-288g17.3 ENSDARG00000070959 2425 1.715 - - - - 0.950 - - - 0.765 si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
53. PHLPP1 ENSDARG00000078694 2466 1.711 - - - 0.736 0.975 - - - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
54. myoz2a ENSDARG00000012311 1373 1.707 - - - - - 0.864 0.843 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
55. FBXL3 FBXL3 1769 1.703 - - - - - - - 0.860 0.843
56. pigt ENSDARG00000075842 210 1.698 - - - - 0.955 - 0.743 - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
57. MCAM MCAM 1765 1.698 - - - - - 0.784 0.914 - -
58. sin3ab ENSDARG00000059812 2140 1.697 - 0.762 - - 0.935 - - - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
59. zgc:63637 zgc:63637 3636 1.696 - - - - - - - 0.862 0.834
60. gdi1 ENSDARG00000056122 4106 1.695 - - - - 0.822 - - - 0.873 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
61. myoz2b ENSDARG00000037266 2139 1.691 - - - - 0.889 - 0.802 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
62. tmem47 ENSDARG00000057322 4691 1.691 - - - - - - 0.881 0.810 - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
63. CLSPN 2054 1.691 - - - 0.756 0.935 - - - - claspin
64. cul3a ENSDARG00000038967 6155 1.689 - - - - - - - 0.927 0.762 cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
65. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.689 - - - - 0.878 - 0.811 - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
66. sertad2a ENSDARG00000093412 503 1.689 - - - - - 0.768 0.921 - - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
67. fgf13a ENSDARG00000035056 752 1.688 - - - - - 0.858 0.830 - - fibroblast growth factor 13a [Source:ZFIN;Acc:ZDB-GENE-041114-101]
68. vcp ENSDARG00000020008, ENSDARG00000116074 2284 1.68 - - - - - 0.802 - - 0.878 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
69. fhdc1 ENSDARG00000074812 934 1.678 - - - - 0.899 - 0.779 - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
70. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 1.677 - - - 0.765 - - - 0.912 - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
71. CU570681.1 CU570681.1 512 1.676 - - - - 0.941 - 0.735 - -
72. nrn1a ENSDARG00000071860 1311 1.674 - - - - 0.934 - - - 0.740 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
73. xpr1 xpr1 840 1.673 - - - - - - 0.844 - 0.829
74. pak2b ENSDARG00000018476 4331 1.673 - - - - 0.913 - 0.760 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
75. camk2d2 ENSDARG00000014273 2840 1.672 - - - - - 0.804 0.868 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
76. crip2 ENSDARG00000070670 4844 1.671 - - - - - 0.787 0.884 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
77. znf511 ENSDARG00000000760 446 1.669 - 0.731 - - 0.938 - - - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
78. angptl4 ENSDARG00000035859 2701 1.668 - - - - - - 0.882 - 0.786 angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
79. sox12 ENSDARG00000025847 681 1.665 - - - - - - - 0.890 0.775 SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
80. zbtb20 ENSDARG00000005586 195 1.665 - - - - 0.958 0.707 - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
81. dennd5a ENSDARG00000017006 3426 1.664 - - - - - 0.763 - 0.901 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
82. cenpk ENSDARG00000039616 744 1.663 - 0.803 - - - - - - 0.860 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
83. pinx1 ENSDARG00000023532 4452 1.663 - - - - 0.722 - - 0.941 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
84. ghitm 1443 1.662 - - - - - - - 0.916 0.746 growth hormone inducible transmembrane protein
85. atf4b2 atf4b2 4734 1.659 - - - - 0.765 - - 0.894 -
86. TNRC6B ENSDARG00000074161 2464 1.659 - - - - 0.897 - - - 0.762 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
87. BX957337.1 BX957337.1 1685 1.657 - - - 0.718 - - - 0.939 -
88. ablim2 ENSDARG00000055223 1934 1.652 - - - - 0.870 0.782 - - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
89. SNAP91 ENSDARG00000098809 556 1.651 0.796 - - - - - - - 0.855 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
90. thoc3 ENSDARG00000056517 909 1.65 - - - 0.721 0.929 - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
91. mycla ENSDARG00000006003 1866 1.649 - - - - 0.948 - 0.701 - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
92. nadl1.2 695 1.649 - 0.824 - - - - - - 0.825 neural adhesion molecule L1.2, transcript variant X1
93. CEP152 ENSDARG00000075725 391 1.648 - 0.787 - - - - - - 0.861 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
94. epb41a ENSDARG00000099283 860 1.648 - - - 0.730 - - - 0.918 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
95. KIF1A KIF1A 1686 1.645 - 0.860 - - - - - - 0.785
96. irx5a ENSDARG00000034043 1694 1.642 - - - - - - 0.782 - 0.860 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
97. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.642 - - - - - - - 0.839 0.803 ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
98. AP3B2 1874 1.641 - - - - - - 0.749 0.892 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
99. plekhj1 ENSDARG00000025593 696 1.641 - 0.708 - - 0.933 - - - - pleckstrin homology domain containing, family J member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2480]
100. txnipb ENSDARG00000070000 2365 1.64 - - - - - 0.758 0.882 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]

There are 2335 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA