Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pbx2

Gene Name Gene ID Reads Annotation
pbx2 ENSDARG00000019717 6892 pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]










Genes with expression patterns similar to pbx2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pbx2 ENSDARG00000019717 6892 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
2. ube4b ENSDARG00000037017 8012 3.227 0.709 - 0.867 - - - 0.810 0.841 - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
3. mcrs1 ENSDARG00000020840 3232 2.627 - 0.988 - - 0.863 - - - 0.776 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
4. hadhab ENSDARG00000060594 3664 2.591 - 0.994 0.840 - - - 0.757 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
5. ddx19 ENSDARG00000005699 4602 2.48 0.763 0.992 - - - - 0.725 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
6. sdc4 ENSDARG00000059906 10105 2.42 - - 0.806 - 0.873 - 0.741 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
7. ppp1cb ENSDARG00000044153 4748 2.416 - - - - 0.861 0.785 - - 0.770 protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
8. eya3 ENSDARG00000036100 1965 2.412 - - 0.854 - 0.845 - - - 0.713 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
9. hnrnpub ENSDARG00000004735 16496 2.398 - 0.902 - - - 0.756 0.740 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
10. usf2 ENSDARG00000020228 2667 2.394 - - - - 0.872 0.792 0.730 - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
11. psmd13 ENSDARG00000016239 4229 2.367 - - 0.899 - - - 0.711 - 0.757 proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
12. MAPRE2 ENSDARG00000099943 3041 2.294 - - - - - 0.809 0.739 - 0.746 microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
13. dut ENSDARG00000106529 3120 2.283 - - 0.842 - - - 0.725 - 0.716 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
14. ftsjd2 ftsjd2 2694 2.28 - - 0.847 - - - 0.717 - 0.716
15. lmnb1 ENSDARG00000044299 9817 2.262 - - 0.745 - 0.731 - 0.786 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
16. fgfr1a ENSDARG00000011027 2705 2.186 - - - - - 0.713 0.726 - 0.747 fibroblast growth factor receptor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-255]
17. hn1b hn1b 7325 2.17 - - - 0.713 - 0.717 0.740 - -
18. ddx27 ENSDARG00000091831 1471 1.873 - 0.995 0.878 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
19. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.851 - 0.997 - - - - 0.854 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
20. kat2a ENSDARG00000104734 802 1.84 - 0.994 - - 0.846 - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
21. med12 ENSDARG00000103953, ENSDARG00000109815, ENSDARG00000116469 1894 1.839 - 0.993 - - - 0.846 - - - mediator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-060125-1]
22. mcm2 ENSDARG00000102798 8148 1.824 - 0.995 0.829 - - - - - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
23. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.79 - - 0.906 - 0.884 - - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
24. entpd1 ENSDARG00000045066 2930 1.787 - 0.994 - - - - 0.793 - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-58]
25. MDC1 ENSDARG00000086764 1851 1.769 - - 0.877 - 0.892 - - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
26. pknox1.1 ENSDARG00000018765 2149 1.758 - 0.992 - - - - - - 0.766 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
27. swi5 ENSDARG00000078492 1299 1.757 - 0.993 - - - - 0.764 - - SWI5 homologous recombination repair protein [Source:ZFIN;Acc:ZDB-GENE-091204-368]
28. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.757 - 0.917 - - - - 0.840 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
29. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.757 - - - - 0.920 - 0.837 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
30. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.751 - - 0.881 - - - 0.870 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
31. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 1.742 - 0.995 - - - - - - 0.747 erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
32. ak2 ENSDARG00000005926 7598 1.737 - 0.905 - - 0.832 - - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
33. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.737 - 0.985 - - - - 0.752 - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
34. fbl ENSDARG00000053912 5891 1.73 - - 0.857 - 0.873 - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
35. PWWP2A ENSDARG00000075526 2163 1.73 - 0.995 - - - 0.735 - - - PWWP domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-131120-4]
36. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 1.724 - 0.955 - - - - 0.769 - - cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
37. setd8a 2549 1.72 - - 0.850 - 0.870 - - - - SET domain containing (lysine methyltransferase) 8a
38. nutf2l ENSDARG00000014499 3927 1.713 - 0.994 - - - - 0.719 - - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
39. sumo3a ENSDARG00000028119 13447 1.711 - 0.989 - - - - 0.722 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
40. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.708 - - - - - - 0.782 0.926 - zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
41. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.704 - - - - 0.874 - 0.830 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
42. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.703 - 0.991 - - - - 0.712 - - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
43. plagl2 ENSDARG00000076657 2057 1.7 - 0.994 - - - 0.706 - - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
44. tmem50a ENSDARG00000015757 3244 1.692 - - 0.874 - - 0.818 - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
45. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.692 - 0.992 - - - - 0.700 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
46. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.677 - - 0.831 - 0.846 - - - - asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
47. anxa4 ENSDARG00000036456 3332 1.677 - - - - 0.825 - - 0.852 - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
48. srsf5a ENSDARG00000029818 15600 1.676 - 0.870 - - 0.806 - - - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
49. sirt2 ENSDARG00000011488 5389 1.67 - - - - 0.869 - - 0.801 - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
50. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.669 - 0.927 - - - - 0.742 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
51. KIF1A KIF1A 1686 1.665 - - - - 0.866 0.799 - - -
52. polr2d ENSDARG00000076509 3386 1.663 - - 0.858 - - - 0.805 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
53. prpf40a ENSDARG00000058467 6565 1.659 - 0.810 - - 0.849 - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
54. GABARAP GABARAP 8341 1.656 - - - - 0.837 - 0.819 - -
55. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.655 - - 0.908 - - - 0.747 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
56. smg7 ENSDARG00000060767 2759 1.653 - - - - 0.891 0.762 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
57. poc1bl ENSDARG00000012745 2451 1.651 - - 0.811 - 0.840 - - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
58. psmd8 ENSDARG00000020454 6645 1.639 - - - - - 0.829 0.810 - - proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
59. pum1 ENSDARG00000099256 5017 1.638 - - 0.825 - - - 0.813 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
60. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.638 - - 0.868 - - - 0.770 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
61. mfap2 ENSDARG00000059367 3774 1.637 - - - - 0.838 - 0.799 - - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
62. ddx49 ENSDARG00000012899 1604 1.635 - - - - 0.870 - 0.765 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
63. CPEB4 CPEB4 3249 1.634 - - 0.807 - 0.827 - - - -
64. ssbp3b ENSDARG00000030155 7163 1.631 - - - - - 0.855 - 0.776 - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
65. C10H11orf30 C10H11orf30 1982 1.628 - - 0.863 - - - 0.765 - -
66. acadvl ENSDARG00000016687 5329 1.627 - - 0.837 - - - 0.790 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
67. safb ENSDARG00000020467 5608 1.627 - - 0.866 - - 0.761 - - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
68. prdx1 ENSDARG00000058734 4582 1.626 - - 0.894 - - - 0.732 - - peroxiredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-35]
69. med19a ENSDARG00000037392, ENSDARG00000114246 2231 1.625 - - 0.862 - - 0.763 - - - mediator complex subunit 19a [Source:ZFIN;Acc:ZDB-GENE-060929-232]
70. USMG5 USMG5 10356 1.621 - - 0.745 - - - 0.876 - -
71. rapgef2 ENSDARG00000005482 2586 1.621 - - 0.860 - - - - 0.761 - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
72. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.618 - - 0.859 - - 0.759 - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
73. abce1 ENSDARG00000007216 7502 1.617 - - - - - 0.750 0.867 - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
74. ppp2r1a ppp2r1a 11291 1.617 - - - - - 0.760 0.857 - -
75. CABZ01087568.1 CABZ01087568.1 1487 1.616 - - 0.854 - - - - - 0.762
76. lypla2 ENSDARG00000053656 8971 1.615 - - 0.791 - - - 0.824 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
77. snrpb ENSDARG00000011125 11729 1.614 - - - - 0.872 - 0.742 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
78. cpsf1 ENSDARG00000034178 2036 1.613 - - 0.858 - - - - - 0.755 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
79. hsbp1a ENSDARG00000069425 1086 1.609 - - 0.858 - - 0.751 - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
80. cks1b ENSDARG00000007971 2739 1.608 - - 0.833 - - - 0.775 - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
81. hexim1 ENSDARG00000036482 4317 1.608 - - 0.832 - - - 0.776 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
82. zgc:91910 ENSDARG00000035678 6172 1.606 - - - - - 0.749 0.857 - - zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
83. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.605 - - 0.871 - - - 0.734 - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
84. ranbp9 ENSDARG00000061048 2687 1.605 - - - - 0.884 0.721 - - - RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
85. egln2 ENSDARG00000062562 2500 1.604 - - 0.842 - - - 0.762 - - egl-9 family hypoxia-inducible factor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-757]
86. eif3m ENSDARG00000013931 8117 1.603 - - 0.811 - - - 0.792 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
87. setdb1b ENSDARG00000099021 2937 1.6 - - 0.864 - - - - - 0.736 SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
88. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 1.598 - - 0.833 - - - 0.765 - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
89. mbd1 mbd1 1309 1.596 0.729 - - - 0.867 - - - -
90. apol1 ENSDARG00000007425, ENSDARG00000110882 1161 1.594 - - 0.834 - - 0.760 - - - apolipoprotein L, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3217]
91. si:ch211-161h7.4 ENSDARG00000087238 4399 1.592 - - 0.751 - 0.841 - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
92. nop10 ENSDARG00000104227 2463 1.592 - - - - 0.870 - 0.722 - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
93. zgc:113348 ENSDARG00000103795 1351 1.589 - - 0.868 - - - - - 0.721 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
94. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.587 - - - - 0.834 - 0.753 - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
95. si:dkey-19e4.5 ENSDARG00000089886 2562 1.586 - - - - 0.874 - 0.712 - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
96. brd7 ENSDARG00000008380 3654 1.586 - - - - 0.873 - 0.713 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
97. cdv3 ENSDARG00000023028 12380 1.586 - - - - 0.722 - 0.864 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
98. TEAD3 TEAD3 8614 1.586 - - 0.863 - - 0.723 - - -
99. ints1 ENSDARG00000100419 1958 1.584 - - - - 0.867 - 0.717 - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
100. snx12 ENSDARG00000019060 9563 1.584 - - 0.853 - - - 0.731 - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]

There are 1415 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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