Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nhlh2

Gene Name Gene ID Reads Annotation
nhlh2 ENSDARG00000025495 1860 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]










Genes with expression patterns similar to nhlh2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nhlh2 ENSDARG00000025495 1860 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
2. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 4.34 0.933 0.891 - - - - 0.984 0.823 0.709 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
3. dla ENSDARG00000010791 9281 4.081 0.748 0.827 - - - - 0.975 0.761 0.770 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
4. nadl1.1 1200 4.038 - 0.736 - - - 0.887 0.978 0.717 0.720 neural adhesion molecule L1.1, transcript variant X1
5. CABZ01028287.1 CABZ01028287.1 626 4.021 0.908 - - 0.769 - 0.760 0.845 - 0.739
6. lhx1a ENSDARG00000014018 958 3.978 0.833 0.737 - - - 0.847 0.839 - 0.722 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
7. nbeaa ENSDARG00000070080 862 3.847 0.713 - - 0.708 - 0.775 0.915 - 0.736 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
8. slc35g2b ENSDARG00000045447 378 3.592 0.824 0.938 - - - 0.871 0.959 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
9. nes ENSDARG00000088805 2710 3.576 0.896 0.825 - - - 0.869 0.986 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
10. neurog1 ENSDARG00000056130 3924 3.546 - 0.911 - 0.727 - 0.927 0.981 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
11. calca ENSDARG00000056590 150 3.533 0.783 0.841 - - - 0.927 0.982 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
12. gfap ENSDARG00000025301 5584 3.514 0.819 - 0.980 - - 0.753 0.962 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
13. nrarpb ENSDARG00000018958 6225 3.501 0.938 - - - - 0.789 0.979 - 0.795 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
14. pou3f2a ENSDARG00000070220 817 3.493 - - 0.988 - - 0.828 0.916 - 0.761 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
15. sox2 ENSDARG00000070913 2763 3.478 0.843 0.807 - - - - 0.977 0.851 - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
16. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.451 0.752 - 0.866 - - 0.869 0.964 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
17. CABZ01029738.1 CABZ01029738.1 327 3.435 0.870 0.887 - - - 0.773 0.905 - -
18. nova2 ENSDARG00000017673 7685 3.423 0.844 - - 0.702 - 0.895 0.982 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
19. CU928222.1 ENSDARG00000097436 1662 3.42 0.868 0.866 - - - 0.736 0.950 - -
20. GLRA3 ENSDARG00000011066 242 3.358 0.734 0.828 - - - 0.841 0.955 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
21. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 3.353 - 0.930 - - - - 0.946 0.728 0.749 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
22. C8H1orf106 C8H1orf106 2690 3.353 - 0.737 - - - 0.969 0.931 - 0.716
23. dlb ENSDARG00000004232 5120 3.341 - 0.814 0.939 0.781 - - - - 0.807 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
24. tuba1c ENSDARG00000055216 8384 3.332 0.795 - - - - 0.807 0.952 - 0.778 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
25. carm1 ENSDARG00000018698 5599 3.324 - - 0.949 - - 0.731 - 0.908 0.736 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
26. dbx1a ENSDARG00000086393 3161 3.314 0.784 0.926 - - - 0.789 0.815 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
27. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 3.296 0.823 - - - - 0.907 - 0.805 0.761 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
28. GADD45G_1 GADD45G_1 236 3.276 - 0.829 - - - 0.889 0.803 - 0.755
29. myt1b ENSDARG00000102879 5411 3.265 - 0.783 - 0.767 - 0.783 0.932 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
30. ptprnb ENSDARG00000077047 2743 3.221 0.789 0.829 - - - 0.712 0.891 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
31. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 3.221 - 0.793 0.968 - - - 0.718 - 0.742 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
32. Sep-03 Sep-03 1124 3.203 0.728 - - - - 0.809 0.910 - 0.756
33. cadm3 ENSDARG00000057013 1545 3.192 - 0.868 - - - 0.764 0.834 0.726 - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
34. coe2 coe2 1633 3.187 - - 0.973 - - 0.710 0.749 - 0.755
35. slc1a2b ENSDARG00000102453 3136 3.142 - 0.717 - - - 0.805 0.905 0.715 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
36. hmgb3a ENSDARG00000056725 15668 3.122 - - - - - 0.811 0.871 0.713 0.727 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
37. tmem198a ENSDARG00000042115 1694 3.104 - - - 0.721 - 0.702 0.872 - 0.809 transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
38. pcyt1ba ENSDARG00000058162 206 3.089 0.749 0.829 - - - 0.763 0.748 - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
39. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 3.032 - - - - - 0.718 0.856 0.750 0.708 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
40. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.842 - 0.940 - - - 0.984 0.918 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
41. nell2b ENSDARG00000062797 854 2.805 0.937 - - - - 0.930 0.938 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
42. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 2.775 - - 0.853 - - 0.937 0.985 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
43. ctnnd2b ENSDARG00000003779 964 2.743 0.816 - - - - 0.945 0.982 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
44. itm2ca ENSDARG00000043448 1265 2.743 - 0.886 - - - 0.889 0.968 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
45. sox19b ENSDARG00000040266 532 2.741 - 0.923 - - - 0.885 0.933 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
46. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.731 0.911 - - - - 0.913 0.907 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
47. syt12 ENSDARG00000101776 215 2.73 0.890 - - - - 0.878 0.962 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
48. tmie ENSDARG00000069423 305 2.729 0.840 - - - - 0.938 0.951 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
49. dbx2 2971 2.714 - 0.826 - - - 0.932 0.956 - - developing brain homeobox 2
50. grin1a ENSDARG00000027828 1327 2.701 0.866 - - - - 0.911 0.924 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
51. pax6a ENSDARG00000103379 3061 2.696 - 0.907 - - - 0.900 0.889 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
52. fbxo41 ENSDARG00000078908 95 2.695 0.782 - - - - 0.950 0.963 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
53. APBB3 ENSDARG00000053771 654 2.691 - - - - - 0.905 0.963 - 0.823 amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
54. hmp19 2554 2.69 0.964 - - - - - 0.978 - 0.748 HMP19 protein
55. chga ENSDARG00000008829 1086 2.686 0.931 - - - - 0.802 0.953 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
56. bhlhe22 ENSDARG00000058039 1673 2.685 - 0.827 - - - 0.933 0.925 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
57. her4.1 ENSDARG00000056732 1264 2.68 0.924 - - - - 0.814 0.942 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
58. mb21d2a mb21d2a 421 2.674 - 0.962 - - - 0.865 0.847 - -
59. mapk12b ENSDARG00000006409 2246 2.662 0.755 - 0.935 - - - 0.972 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
60. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.657 0.846 - - - - - 0.971 - 0.840 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
61. dync1i1 ENSDARG00000060948 554 2.653 - - - - - 0.935 0.953 - 0.765 dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
62. TUBA1A ENSDARG00000001889 25294 2.645 - - - - - 0.802 0.984 0.859 - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
63. ROBO3_1 ROBO3_1 468 2.641 0.762 0.966 - - - - 0.913 - -
64. clstn1 ENSDARG00000031720 5286 2.635 - - - 0.780 - 0.943 0.912 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
65. elavl4 ENSDARG00000045639 998 2.633 - 0.786 - - - 0.908 0.939 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
66. tmem35 ENSDARG00000052567 5685 2.632 - - - - - 0.899 0.955 - 0.778 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
67. cadpsb ENSDARG00000070567 458 2.631 0.762 - - - - 0.897 0.972 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
68. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 2.631 0.940 - - - - 0.934 0.757 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
69. sox21a ENSDARG00000031664, ENSDARG00000111842 1700 2.631 0.964 0.703 0.964 - - - - - - SRY (sex determining region Y)-box 21a [Source:ZFIN;Acc:ZDB-GENE-990715-6]
70. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.63 0.968 - - - - 0.918 0.744 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
71. CABZ01111990.1 CABZ01111990.1 4374 2.629 0.751 - - - - 0.936 0.942 - -
72. rab39b rab39b 449 2.623 - 0.840 - - - 0.907 0.876 - -
73. cplx2l ENSDARG00000018997 3975 2.617 0.715 - 0.973 - - - 0.929 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
74. MCAM MCAM 1765 2.614 - - 0.968 - - 0.851 - - 0.795
75. zgc:100906 ENSDARG00000033599 344 2.611 0.871 - - - - 0.848 0.892 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
76. PPP2R5B ENSDARG00000054931 213 2.611 0.848 - - - - 0.879 0.884 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
77. relnl relnl 863 2.604 - 0.930 - - - 0.830 0.844 - -
78. map6 map6 70 2.603 0.784 - - - - 0.846 0.973 - -
79. slc18a3a ENSDARG00000006356 1285 2.601 - 0.774 - - - 0.845 0.982 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
80. her13 ENSDARG00000007097 2000 2.595 0.844 0.784 - - - - 0.967 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
81. ELOVL4 ELOVL4 3026 2.595 - - 0.983 - - - 0.847 - 0.765
82. WNK2 ENSDARG00000104989 429 2.595 0.854 - - - - 0.832 0.909 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
83. dpysl3 ENSDARG00000002587 4381 2.595 - - - - - 0.899 0.945 - 0.751 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
84. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 2.594 - 0.893 - - - 0.714 0.987 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
85. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.59 - 0.752 - - - 0.853 0.985 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
86. her2 ENSDARG00000038205 3219 2.588 0.762 - - - - 0.865 0.961 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
87. tox ENSDARG00000032317 9126 2.585 0.842 - - - - - 0.944 - 0.799 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
88. dpysl5b ENSDARG00000059311 600 2.583 0.722 - - - - 0.958 0.903 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
89. FAM171A2 FAM171A2 707 2.577 0.882 0.831 - - - - 0.864 - -
90. clvs2 ENSDARG00000053122 1390 2.573 0.761 - - - - - 0.978 - 0.834 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
91. vim ENSDARG00000010008 3551 2.569 0.798 - - - - 0.848 0.923 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
92. CR848045.1 CR848045.1 459 2.567 - 0.752 - - - 0.890 0.925 - -
93. syngr3a ENSDARG00000014871 405 2.566 0.708 - - - - 0.927 0.931 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
94. CHL1 CHL1 1553 2.563 0.754 - - - - 0.934 0.875 - -
95. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.563 - - - - - 0.900 0.912 - 0.751 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
96. chat chat 463 2.561 0.746 - - - - 0.840 0.975 - -
97. PRKAR2B ENSDARG00000036446 812 2.559 0.762 - - - - 0.946 0.851 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
98. pcdh1gc5 ENSDARG00000104826 10052 2.555 - 0.848 - - - 0.726 0.981 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
99. golga7ba ENSDARG00000036295 1460 2.553 0.738 - - - - - 0.948 - 0.867 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
100. lrrc4.1 ENSDARG00000069402 323 2.551 0.900 - - - - 0.729 0.922 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]

There are 2468 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA