Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ndufs3

Gene Name Gene ID Reads Annotation
ndufs3 ENSDARG00000015385 7790 NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]










Genes with expression patterns similar to ndufs3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ndufs3 ENSDARG00000015385 7790 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
2. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 3.392 0.732 0.854 - - - 0.809 0.997 - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
3. cyc1 ENSDARG00000038075 16699 2.589 0.839 0.897 - - - 0.853 - - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
4. mibp2 ENSDARG00000101844 17444 2.517 0.825 0.858 - - - 0.834 - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
5. calm1b ENSDARG00000034187 13158 2.508 0.750 - - - - 0.791 0.967 - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
6. hhatlb ENSDARG00000005139 6674 2.454 0.756 0.875 - - - 0.823 - - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
7. sdhdb ENSDARG00000030139 9761 2.365 0.739 - - - - 0.854 - - 0.772 succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
8. aimp1 ENSDARG00000060036 5343 2.319 0.822 - - 0.721 - 0.776 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
9. txlnbb ENSDARG00000076241 6396 2.312 0.786 - - - - 0.791 - - 0.735 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
10. smyd2b ENSDARG00000005629 8181 2.312 0.779 - - 0.742 - 0.791 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
11. si:ch1073-325m22.2 ENSDARG00000095921 8534 2.286 - - - - - 0.827 - 0.704 0.755 si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
12. sucla2 ENSDARG00000005359 5992 2.272 - - - 0.726 - 0.802 - - 0.744 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
13. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 2.263 0.748 - - - - 0.772 - - 0.743 NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
14. limch1a ENSDARG00000074275 2981 2.122 0.706 - - - 0.716 0.700 - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
15. rbm14b ENSDARG00000103834 1597 1.864 - 0.871 - - - - 0.993 - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
16. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.861 - 0.869 - - - - 0.992 - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
17. hif1ab ENSDARG00000034293 10284 1.843 - 0.860 - - - - 0.983 - - hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
18. slc31a1 ENSDARG00000013961, ENSDARG00000110656 4072 1.815 - 0.823 - - - - 0.992 - - solute carrier family 31 (copper transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3]
19. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 1.791 - - - - - - 0.999 - 0.792 pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
20. ndufv1 ENSDARG00000036438 8437 1.768 0.854 - - - - 0.914 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
21. atp5e 14858 1.745 - 0.923 - - - - - - 0.822 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
22. slc38a4 ENSDARG00000018149 2344 1.731 - - - - - 0.737 0.994 - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
23. gcdh gcdh 1390 1.73 - - - - - 0.736 0.994 - -
24. ola1 ENSDARG00000044565 22424 1.716 - - - - - 0.914 - - 0.802 Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
25. anxa11a ENSDARG00000077383 4076 1.714 - - - - - - 0.996 - 0.718 annexin A11a [Source:ZFIN;Acc:ZDB-GENE-030707-4]
26. ndufs2 ENSDARG00000007526 6516 1.703 - - - - - 0.872 - - 0.831 NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273]
27. zgc:193541 ENSDARG00000092873 21276 1.682 - 0.821 - - - 0.861 - - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
28. tnnt2d ENSDARG00000002988 7590 1.676 0.850 - - - - 0.826 - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
29. mdh2 ENSDARG00000043371 14485 1.67 0.867 - - - - - - - 0.803 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
30. myoz1b ENSDARG00000071445 13381 1.653 0.736 - - - - - 0.917 - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
31. eif3ha ENSDARG00000102452 9238 1.651 - 0.860 - - - 0.791 - - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
32. rpl13 ENSDARG00000099380 20663 1.641 0.763 - - - - 0.878 - - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
33. rpl22l1 ENSDARG00000010244 36262 1.635 - - - - - 0.865 0.770 - - ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
34. myom1a ENSDARG00000061249 10230 1.635 - 0.863 - - - 0.772 - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
35. ndufb3 ENSDARG00000075709 6609 1.624 - 0.802 - - - 0.822 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
36. mef2d ENSDARG00000040237 6144 1.621 0.815 - - - - 0.806 - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
37. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.62 0.832 - - - - 0.788 - - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
38. acap3a ENSDARG00000075990 9652 1.62 - 0.863 - - - 0.757 - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
39. ube2v2 ENSDARG00000028198 23341 1.614 0.779 - - - - 0.835 - - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
40. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.613 0.761 - - - - 0.852 - - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
41. sox6 ENSDARG00000015536 7728 1.606 0.815 - - - - 0.791 - - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
42. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.597 0.824 - - - - - - - 0.773 ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
43. ndufb9 ENSDARG00000041314, ENSDARG00000112557 15434 1.595 - - - - - 0.808 - - 0.787 NADH:ubiquinone oxidoreductase subunit B9 [Source:ZFIN;Acc:ZDB-GENE-030131-8364]
44. sar1ab ENSDARG00000033320 3984 1.595 0.720 0.875 - - - - - - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
45. mrps18a ENSDARG00000024465 5187 1.592 - 0.857 - - - 0.735 - - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
46. cox7a2a ENSDARG00000053217 12564 1.586 - - - - - 0.811 - - 0.775 cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
47. flncb ENSDARG00000018820 5595 1.579 0.829 - - - - 0.750 - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
48. chchd3 chchd3 4139 1.577 0.766 - - - - 0.811 - - -
49. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 1.576 0.747 - - - - 0.829 - - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
50. atp5g1 51897 1.576 0.795 - - - - - - - 0.781 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
51. nexn ENSDARG00000057317 10972 1.575 0.792 - - - - 0.783 - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
52. TRIM63 TRIM63 1600 1.573 0.748 - - - - 0.825 - - -
53. ndufv3 ENSDARG00000090389 4829 1.57 - - - - - 0.759 - - 0.811 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
54. sh3bgr ENSDARG00000021633 3498 1.57 0.754 - - - - 0.816 - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
55. tufm ENSDARG00000104173 9292 1.565 0.714 0.851 - - - - - - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
56. pdcd5 ENSDARG00000026072 3135 1.565 0.701 0.864 - - - - - - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
57. pdcd4a ENSDARG00000021702 7293 1.564 - - - - 0.710 0.854 - - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
58. tmem182 tmem182 12589 1.559 - 0.801 - - - 0.758 - - -
59. serbp1a ENSDARG00000074242 10818 1.557 0.765 - - - - 0.792 - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
60. zgc:158296 ENSDARG00000070923 3935 1.555 - - - - - 0.812 - - 0.743 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
61. ndufb10 ENSDARG00000028889 7680 1.554 - - - - - 0.805 - - 0.749 NADH:ubiquinone oxidoreductase subunit B10 [Source:ZFIN;Acc:ZDB-GENE-040426-1691]
62. tmem161a ENSDARG00000012790 16094 1.551 0.788 - - 0.763 - - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
63. smtnl1 ENSDARG00000041257 7410 1.548 0.779 - - - - 0.769 - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
64. SYNPO2 SYNPO2 7382 1.547 - 0.835 - - - 0.712 - - -
65. PTPLA PTPLA 4044 1.546 0.750 - - - - 0.796 - - -
66. usp2a ENSDARG00000020107 2586 1.545 0.719 - - - - 0.826 - - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
67. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.543 0.747 - - - - - 0.796 - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
68. atp5ib 19664 1.543 0.837 - - - - 0.706 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Eb
69. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.535 0.747 - - - - 0.788 - - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
70. mrps34 ENSDARG00000057910 2007 1.535 0.806 - - - - 0.729 - - - mitochondrial ribosomal protein S34 [Source:ZFIN;Acc:ZDB-GENE-041114-71]
71. zgc:92518 ENSDARG00000016343 3837 1.533 0.775 - - - - 0.758 - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
72. chrna1 ENSDARG00000009021 2931 1.532 0.715 - - - - 0.817 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
73. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.53 0.762 - - - - 0.768 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
74. chrnd ENSDARG00000019342 2728 1.528 0.792 - - - 0.736 - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
75. aldh7a1 ENSDARG00000018426 4637 1.526 0.751 - - - - 0.775 - - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
76. vdac2 ENSDARG00000013623 37765 1.526 0.818 - - - - - - - 0.708 voltage-dependent anion channel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-845]
77. ndufb8 ENSDARG00000010113 11385 1.525 - - - - - 0.781 - - 0.744 NADH:ubiquinone oxidoreductase subunit B8 [Source:ZFIN;Acc:ZDB-GENE-040426-1858]
78. mafa ENSDARG00000015890 2140 1.524 0.740 - - - - 0.784 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
79. mycb ENSDARG00000007241 3988 1.523 0.754 - - - - 0.769 - - - MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
80. trdn ENSDARG00000041779 4283 1.523 0.766 - - - - 0.757 - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
81. eif2s2 ENSDARG00000053047 15904 1.522 - - - - - 0.763 - 0.759 - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
82. tomm5 ENSDARG00000068265 11813 1.521 0.784 - - - 0.737 - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
83. phb ENSDARG00000057414 9551 1.521 0.727 - - - - - - - 0.794 prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
84. znf106a ENSDARG00000016651 6049 1.517 0.769 - - - - - - - 0.748 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
85. cnbpa ENSDARG00000045776 8648 1.514 0.761 - - - - 0.753 - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
86. kars ENSDARG00000103799 20937 1.512 0.792 - - 0.720 - - - - - lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]
87. rp42-pen rp42-pen 3395 1.511 - - - - - 0.795 - - 0.716
88. vcl vcl 6667 1.51 0.809 - - - - - - - 0.701
89. nid1a ENSDARG00000068710 3948 1.506 0.717 - - - - 0.789 - - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
90. C22H19orf70 C22H19orf70 4393 1.505 0.711 - - - - 0.794 - - -
91. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.504 0.761 - - - - 0.743 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
92. eif4e2 ENSDARG00000038585 2116 1.503 0.742 - - - - 0.761 - - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
93. srsf5a ENSDARG00000029818 15600 1.5 0.717 - - - - 0.783 - - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
94. ppapdc3 ppapdc3 4924 1.498 0.784 - - - - 0.714 - - -
95. ndufs5 ENSDARG00000006290 15918 1.498 0.763 - - - - 0.735 - - - NADH:ubiquinone oxidoreductase subunit S5 [Source:ZFIN;Acc:ZDB-GENE-050522-437]
96. PHB2 PHB2 3755 1.497 0.756 - - - - - - 0.741 -
97. xirp2a ENSDARG00000071113 7113 1.497 0.721 - - - - 0.776 - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
98. KIAA0355 3250 1.495 - - - - 0.747 0.748 - - - KIAA0355 ortholog, transcript variant X1
99. C1QBP ENSDARG00000039887 11186 1.495 0.792 - - 0.703 - - - - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
100. atpif1b 8625 1.493 - - - - - 0.766 - - 0.727 ATPase inhibitory factor 1b

There are 722 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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