Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrps35

Gene Name Gene ID Reads Annotation
mrps35 ENSDARG00000038456 1514 mitochondrial ribosomal protein S35 [Source:ZFIN;Acc:ZDB-GENE-050809-131]










Genes with expression patterns similar to mrps35

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrps35 ENSDARG00000038456 1514 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein S35 [Source:ZFIN;Acc:ZDB-GENE-050809-131]
2. mrps34 ENSDARG00000057910 2007 3.103 0.760 0.811 - - - 0.734 0.798 - - mitochondrial ribosomal protein S34 [Source:ZFIN;Acc:ZDB-GENE-041114-71]
3. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 2.988 0.702 0.792 - - - 0.719 0.775 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
4. PTP4A3 ENSDARG00000039997 3814 2.404 - 0.830 - - - 0.772 0.802 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
5. pa2g4b ENSDARG00000070657 7999 2.346 - 0.840 - - - 0.747 0.759 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
6. MYOM3 2720 2.341 - 0.878 - - - 0.748 0.715 - - myomesin 3, transcript variant X2
7. rab5if ENSDARG00000074790 8807 2.339 - 0.806 - - - 0.759 0.774 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
8. txlnbb ENSDARG00000076241 6396 2.272 0.741 0.773 - - - - 0.758 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
9. smyd2b ENSDARG00000005629 8181 2.269 0.741 0.803 - - - 0.725 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
10. rp42-pen rp42-pen 3395 2.268 - 0.738 - - - 0.736 0.794 - -
11. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 2.262 0.790 0.702 - - - 0.770 - - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
12. ATP5J_2 ATP5J_2 2381 2.246 - 0.788 - - - 0.703 0.755 - -
13. zgc:158296 ENSDARG00000070923 3935 2.245 - 0.731 - - - 0.724 0.790 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
14. ITGB1BP2 ENSDARG00000030176 2472 2.215 0.733 0.776 - - - - 0.706 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
15. mef2d ENSDARG00000040237 6144 2.191 - 0.726 - - - 0.731 0.734 - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
16. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 2.179 - 0.719 - - - 0.751 0.709 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
17. zgc:92518 ENSDARG00000016343 3837 2.176 0.725 - - - - 0.707 0.744 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
18. PTPLA PTPLA 4044 2.149 0.708 0.718 - - - - 0.723 - -
19. BX294434.1 ENSDARG00000061272 6493 2.148 0.707 0.717 - - - - 0.724 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
20. BCKDHB ENSDARG00000014676 3725 1.665 - 0.858 - - - - 0.807 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
21. cilp ENSDARG00000053362 1429 1.643 - 0.860 - - - - 0.783 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
22. PYURF ENSDARG00000045773 4576 1.64 - 0.868 - - - - 0.772 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
23. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.625 - 0.816 - - - - 0.809 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
24. tmsb ENSDARG00000054911 6411 1.623 0.758 0.865 - - - - - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
25. timm9 ENSDARG00000043865 2456 1.617 - 0.821 - - - - 0.796 - - translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
26. PHB2 PHB2 3755 1.606 - 0.864 - - - - 0.742 - -
27. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.605 - - - - - 0.890 0.715 - - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
28. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.597 0.846 - - - - 0.751 - - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
29. cyc1 ENSDARG00000038075 16699 1.595 - - - - - 0.795 0.800 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
30. timm8b ENSDARG00000055708 7291 1.585 - 0.842 - - - - 0.743 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
31. MRPL55 MRPL55 1711 1.582 - 0.793 - - - - 0.789 - -
32. NOP14 ENSDARG00000098859 1288 1.576 - 0.849 - - - - 0.727 - - NOP14 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9691]
33. lrrc20 ENSDARG00000105018 1970 1.575 - 0.841 - - - - 0.734 - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
34. C1QBP ENSDARG00000039887 11186 1.573 0.750 - - - - - 0.823 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
35. bag3 ENSDARG00000039486 1087 1.573 0.755 - - - - - 0.818 - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
36. stip1 ENSDARG00000004906 7742 1.568 0.768 - - - - - 0.800 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
37. ndufs6 ENSDARG00000056583 7220 1.565 - - - - - 0.781 0.784 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
38. ndufab1b ENSDARG00000014915 12796 1.564 - 0.806 - - - - 0.758 - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
39. aass ENSDARG00000051816 3795 1.563 0.805 - - - - 0.758 - - - aminoadipate-semialdehyde synthase [Source:ZFIN;Acc:ZDB-GENE-061220-8]
40. C25H12orf73 C25H12orf73 2031 1.563 - 0.834 - - - - 0.729 - -
41. chd4b ENSDARG00000025789 14299 1.56 0.732 0.828 - - - - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
42. acsl1 acsl1 4216 1.559 - - - - - 0.794 0.765 - -
43. mrpl12 ENSDARG00000038768 5539 1.559 - 0.845 - - - 0.714 - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
44. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 1.558 - 0.796 - - - - 0.762 - - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
45. polr1d ENSDARG00000037570 860 1.557 - 0.828 - - - - 0.729 - - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
46. mrpl45 ENSDARG00000044942, ENSDARG00000114416, ENSDARG00000115767 1599 1.557 0.766 0.791 - - - - - - - mitochondrial ribosomal protein L45 [Source:ZFIN;Acc:ZDB-GENE-040426-1041]
47. MYOM1 MYOM1 3870 1.557 - 0.846 - - - - 0.711 - -
48. alpk3a ENSDARG00000078989 1992 1.556 0.756 0.800 - - - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
49. capzb ENSDARG00000100252 10444 1.556 - - - - - 0.719 0.837 - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
50. egln1 egln1 3746 1.555 - 0.723 - - - - 0.832 - -
51. sh3kbp1 ENSDARG00000075853 2838 1.553 - 0.774 - - - - 0.779 - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
52. slc25a12 ENSDARG00000102362 2773 1.552 - 0.733 - - - - 0.819 - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
53. apobec2a ENSDARG00000018881 4790 1.55 0.737 0.813 - - - - - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
54. slc25a11 ENSDARG00000035741 3377 1.549 - - - - - 0.804 0.745 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
55. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 1.547 0.803 - - - - 0.744 - - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
56. cct8 ENSDARG00000008243 6843 1.546 - 0.800 - - - 0.746 - - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
57. txnipb ENSDARG00000070000 2365 1.545 0.715 0.830 - - - - - - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
58. rwdd1 ENSDARG00000015930 2380 1.544 - 0.737 - - - - 0.807 - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
59. mrps15 ENSDARG00000109289 3258 1.543 - 0.801 - - - - 0.742 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
60. cox7c ENSDARG00000104537 12169 1.543 - - - - - 0.717 0.826 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
61. ube2g1b ENSDARG00000069527 5376 1.538 - 0.835 - - - 0.703 - - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
62. EEF1E1 ENSDARG00000071774 3806 1.537 - 0.746 - - - - 0.791 - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
63. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.532 - 0.765 - - - - 0.767 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
64. MRPL52 ENSDARG00000090568 4402 1.528 - 0.770 - - - - 0.758 - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
65. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.526 - 0.760 - - - - 0.766 - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
66. cth ENSDARG00000074301 3860 1.525 0.750 0.775 - - - - - - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
67. rps25 ENSDARG00000041811 52182 1.524 0.741 - - - - 0.783 - - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
68. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.523 - - - - - 0.805 0.718 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
69. sar1ab ENSDARG00000033320 3984 1.522 0.767 - - - - - 0.755 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
70. col4a2 ENSDARG00000104110 947 1.517 - - - - - 0.786 0.731 - - collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]
71. ntmt1 ENSDARG00000022399 5779 1.516 - 0.796 - - - - 0.720 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
72. wu:fb17g07 wu:fb17g07 10567 1.514 - 0.789 - - - 0.725 - - -
73. ndufb11 ENSDARG00000043467 7495 1.513 - - - - - 0.736 0.777 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
74. CU633479.5 ENSDARG00000114818 1815 1.513 - 0.806 - - - - 0.707 - -
75. pdcd5 ENSDARG00000026072 3135 1.512 - - - - - 0.782 0.730 - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
76. cacng1 cacng1 3118 1.512 - 0.782 - - - - 0.730 - -
77. cct3 ENSDARG00000016173 15869 1.509 0.730 - - - - - 0.779 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
78. mrpl9 ENSDARG00000063249 783 1.508 - 0.719 - - - - 0.789 - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
79. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.507 - 0.713 - - - - 0.794 - -
80. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.507 0.759 - - - - - 0.748 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
81. gypc ENSDARG00000041546 1487 1.504 - 0.780 - - - - 0.724 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
82. krr1 ENSDARG00000011246 1624 1.504 - 0.757 - - - 0.747 - - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
83. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.503 0.739 - - - - - 0.764 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
84. pcmt ENSDARG00000015201 5132 1.502 - 0.778 - - - - 0.724 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
85. FAM210B ENSDARG00000052638 1755 1.501 - 0.711 - - - - 0.790 - - family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
86. myf6 ENSDARG00000029830 1911 1.499 - 0.753 - - - - 0.746 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
87. cct5 ENSDARG00000045399 11572 1.499 0.711 0.788 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
88. cox6c ENSDARG00000038577 16845 1.497 - - - - - 0.702 0.795 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
89. nid1a ENSDARG00000068710 3948 1.496 - - - - - 0.729 0.767 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
90. cap2 ENSDARG00000104478 3266 1.494 0.738 - - - - - 0.756 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
91. ncl ENSDARG00000002710 16951 1.493 - 0.748 - - - 0.745 - - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
92. hdac9b ENSDARG00000056642 1148 1.492 0.723 0.769 - - - - - - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
93. CR388002.1 CR388002.1 1998 1.492 0.722 0.770 - - - - - - -
94. mibp2 ENSDARG00000101844 17444 1.49 0.722 - - - - 0.768 - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
95. st3gal3a ENSDARG00000015374 2360 1.488 - 0.776 - - - 0.712 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1322]
96. txn2 ENSDARG00000034777 4071 1.486 - 0.724 - - - - 0.762 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
97. sptb ENSDARG00000030490 7128 1.485 - 0.783 - - - - 0.702 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
98. rpl7 ENSDARG00000007320 81359 1.483 0.735 - - - - - 0.748 - - ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
99. nmrk2 ENSDARG00000067848 10293 1.481 - 0.747 - - - - 0.734 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
100. enpp1 ENSDARG00000005789 3267 1.481 0.778 - - - - - 0.703 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]

There are 1063 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA