Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mlh3

Gene Name Gene ID Reads Annotation
mlh3 ENSDARG00000056334 142 mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]










Genes with expression patterns similar to mlh3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mlh3 ENSDARG00000056334 142 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
2. htra1b ENSDARG00000014907 146 1.862 - - - - - 0.969 0.893 - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
3. si:ch211-286e11.3 si:ch211-286e11.3 20 1.851 - - - - - 0.934 0.917 - -
4. si:dkey-162h11.2 si:dkey-162h11.2 257 1.842 0.922 - - - - - 0.920 - -
5. BX569778.1 BX569778.1 36 1.83 0.922 - - - - 0.908 - - -
6. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.823 0.922 - - - - 0.901 - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
7. CD53 CD53 108 1.817 0.922 - - - - 0.895 - - -
8. dbh ENSDARG00000069446, ENSDARG00000114942 60 1.816 0.899 - - - - - 0.917 - - dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
9. zgc:110353 ENSDARG00000039443 80 1.795 0.922 - - 0.873 - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
10. zgc:174573 ENSDARG00000079035 89 1.745 0.870 - - - - 0.875 - - - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
11. si:ch211-149a19.3 ENSDARG00000079456 115 1.74 - - - - - 0.921 0.819 - - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
12. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 1.735 0.877 - - - - - 0.858 - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
13. dlx1a ENSDARG00000013125 142 1.72 0.803 - - - - - 0.917 - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
14. adat3 ENSDARG00000005640 96 1.717 - 0.872 - 0.845 - - - - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
15. dcun1d4 ENSDARG00000092394 258 1.714 - - - 0.935 - - 0.779 - - DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-248]
16. qdprb1 ENSDARG00000037378, ENSDARG00000115067, ENSDARG00000115308 338 1.697 - - - 0.926 - - 0.771 - - quinoid dihydropteridine reductase b1 [Source:ZFIN;Acc:ZDB-GENE-050522-320]
17. camk2b1 ENSDARG00000011065 79 1.688 0.790 - - - - - 0.898 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
18. mfng ENSDARG00000042925 104 1.683 - 0.723 - - - 0.960 - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
19. gal3st1 gal3st1 108 1.682 0.900 0.782 - - - - - - -
20. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 1.673 - - - - - 0.765 0.908 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
21. UFSP1 ENSDARG00000061610 81 1.662 - 0.734 - - - - 0.928 - - UFM1-specific peptidase 1 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-070410-124]
22. CLMN ENSDARG00000096867 73 1.662 0.823 - - - - 0.839 - - - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
23. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 1.661 0.779 - - - - - 0.882 - -
24. CPAMD8 ENSDARG00000056530 3481 1.658 - - - 0.829 - 0.829 - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
25. LRIF1 LRIF1 135 1.643 0.757 - - - - - 0.886 - -
26. rab3db ENSDARG00000101534 45 1.642 0.706 - - - - 0.936 - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
27. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 1.641 0.819 - - - - 0.822 - - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
28. si:dkeyp-53d3.6 204 1.64 0.800 - - 0.840 - - - - - si:dkeyp-53d3.6, transcript variant X1
29. rnf34b ENSDARG00000054036 121 1.639 - 0.744 - - - - 0.895 - - ring finger protein 34b [Source:ZFIN;Acc:ZDB-GENE-071004-31]
30. si:ch211-198d23.1 ENSDARG00000092574 104 1.632 0.823 - - - - 0.809 - - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
31. dpf2 ENSDARG00000012219 666 1.625 - - - - - 0.793 0.832 - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
32. dnajb9a ENSDARG00000052072 578 1.618 0.850 - - 0.768 - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
33. dpf1 ENSDARG00000099927, ENSDARG00000115986 138 1.616 - - - - - 0.810 0.806 - - D4, zinc and double PHD fingers family 1 [Source:ZFIN;Acc:ZDB-GENE-050913-31]
34. CABZ01032467.1 CABZ01032467.1 400 1.614 - - - 0.821 - 0.793 - - -
35. dus4l ENSDARG00000006567 261 1.612 0.902 - - - - - 0.710 - - dihydrouridine synthase 4-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-233]
36. METTL18 ENSDARG00000074588 918 1.611 - - - 0.818 - 0.793 - - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
37. FEZ2_1 FEZ2_1 153 1.596 - 0.765 - 0.831 - - - - -
38. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 1.585 - 0.752 - 0.833 - - - - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
39. lad1 ENSDARG00000022698 127 1.581 0.719 - - - - - 0.862 - - ladinin [Source:ZFIN;Acc:ZDB-GENE-030616-268]
40. satb1a ENSDARG00000057649 250 1.578 0.706 0.872 - - - - - - - SATB homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-031010-36]
41. hsd17b4 ENSDARG00000101239 301 1.568 - - - 0.798 - - 0.770 - - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
42. SAC3D1 SAC3D1 72 1.567 0.764 - - - - - 0.803 - -
43. fhl3b ENSDARG00000104315 359 1.557 0.778 - - - - - 0.779 - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
44. BX465841.1 BX465841.1 47 1.556 0.783 0.773 - - - - - - -
45. ncbp2 ENSDARG00000014898 232 1.555 - - - 0.798 - 0.757 - - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
46. C17H2orf43 C17H2orf43 379 1.552 - - - 0.742 - 0.810 - - -
47. si:dkey-42p8.3 1117 1.548 - - - 0.842 - 0.706 - - - si:dkey-42p8.3, transcript variant X1
48. si:dkey-68l7.1 si:dkey-68l7.1 159 1.517 - 0.799 - 0.718 - - - - -
49. maml3 ENSDARG00000079552 357 1.51 - - - 0.781 - - 0.729 - - mastermind-like transcriptional coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-292]
50. mid1 ENSDARG00000060482 154 1.506 - - - - - 0.753 0.753 - - midline 1 [Source:ZFIN;Acc:ZDB-GENE-110411-205]
51. CR759907.4 CR759907.4 14 1.498 0.797 - 0.701 - - - - - -
52. SMAD4_3 SMAD4_3 131 1.497 - 0.712 - - - 0.785 - - -
53. BX927349.2 BX927349.2 325 1.465 0.712 - - 0.753 - - - - -
54. zgc:173480 171 1.42 0.718 0.702 - - - - - - - zgc:173480
55. BX510922.1 ENSDARG00000101184 147 0.969 - - - - - 0.969 - - -
56. CU367845.1 CU367845.1 215 0.969 - - - - - 0.969 - - -
57. sytl4 ENSDARG00000102433 19 0.969 - - - - - 0.969 - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
58. CABZ01088365.1 CABZ01088365.1 66 0.969 - - - - - 0.969 - - -
59. batf3 ENSDARG00000042577 34 0.969 - - - - - 0.969 - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
60. FBXL6 ENSDARG00000077227 28 0.969 - - - - - 0.969 - - - F-box and leucine-rich repeat protein 6 [Source:ZFIN;Acc:ZDB-GENE-060810-162]
61. hal ENSDARG00000017444 11 0.965 - - - - - 0.965 - - - histidine ammonia-lyase [Source:ZFIN;Acc:ZDB-GENE-070410-5]
62. trim23 ENSDARG00000069420 103 0.963 - - - - - 0.963 - - - tripartite motif containing 23 [Source:ZFIN;Acc:ZDB-GENE-060929-804]
63. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 0.961 - - - - - 0.961 - - - distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
64. HAUS2 HAUS2 392 0.958 - - - - - - 0.958 - -
65. FP074874.2 ENSDARG00000105724 107 0.956 - - - 0.956 - - - - -
66. st8sia4 ENSDARG00000103600 198 0.954 - - - - - - 0.954 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-10]
67. CR932000.1 ENSDARG00000097733 40 0.953 - - - - - 0.953 - - -
68. TEP1 ENSDARG00000038713 289 0.949 - - - - - 0.949 - - - telomerase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6153]
69. hcn4l ENSDARG00000074419 46 0.948 - - - - - 0.948 - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
70. loh12cr1 loh12cr1 346 0.947 - - - - - - 0.947 - -
71. si:ch73-234b20.4 112 0.947 - - - - - - 0.947 - - si:ch73-234b20.4, transcript variant X1
72. alx4b ENSDARG00000074442 29 0.944 - - - - - 0.944 - - - ALX homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-050208-140]
73. UIMC1 200 0.944 0.944 - - - - - - - - ubiquitin interaction motif containing 1
74. znf516 ENSDARG00000070809 65 0.944 - - - - - 0.944 - - - zinc finger protein 516 [Source:ZFIN;Acc:ZDB-GENE-060503-194]
75. FAM83H FAM83H 190 0.943 - - - - - 0.943 - - -
76. si:dkey-277m11.2 ENSDARG00000094879 15 0.943 - - - - - 0.943 - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
77. alk ENSDARG00000095833 32 0.943 - - - - - 0.943 - - - ALK receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-031027-1]
78. qdprb2 ENSDARG00000086859, ENSDARG00000090118, ENSDARG00000113718, ENSDARG00000116809 5 0.943 - - - - - 0.943 - - - quinoid dihydropteridine reductase b2 [Source:ZFIN;Acc:ZDB-GENE-070720-19]
79. CR790363.2 CR790363.2 2 0.943 - - - - - 0.943 - - -
80. wnt2ba ENSDARG00000005050 11 0.943 - - - - - 0.943 - - - wingless-type MMTV integration site family, member 2Ba [Source:ZFIN;Acc:ZDB-GENE-030717-2]
81. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 0.943 - - - - - 0.943 - - - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
82. si:dkey-25o1.7 ENSDARG00000093570, ENSDARG00000100520, ENSDARG00000111049, ENSDARG00000112319 13 0.943 - - - - - 0.943 - - - si:dkey-25o1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-375]
83. rundc3b ENSDARG00000009961 10 0.943 - - - - - 0.943 - - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
84. cx34.5 ENSDARG00000069411 3 0.943 - - - - - 0.943 - - - connexin 34.5 [Source:ZFIN;Acc:ZDB-GENE-050224-2]
85. crybb1l3 ENSDARG00000007655 33 0.943 - - - - - 0.943 - - - crystallin, beta B1, like 3 [Source:ZFIN;Acc:ZDB-GENE-070820-11]
86. hpx ENSDARG00000012609 93 0.943 - - - - - 0.943 - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
87. si:dkey-178o8.3 si:dkey-178o8.3 2 0.943 - - - - - 0.943 - - -
88. cnstb ENSDARG00000042759 105 0.943 - - - - - 0.943 - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
89. fbxl18 ENSDARG00000007443, ENSDARG00000113264 178 0.943 - 0.943 - - - - - - - F-box and leucine-rich repeat protein 18 [Source:ZFIN;Acc:ZDB-GENE-050913-65]
90. paqr7a ENSDARG00000100462 15 0.943 - - - - - 0.943 - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
91. gpr112b gpr112b 28 0.943 - - - - - 0.943 - - -
92. si:dkey-10o6.2 ENSDARG00000074628 22 0.943 - - - - - 0.943 - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
93. gsto1 ENSDARG00000022183 13 0.943 - - - - - 0.943 - - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
94. CABZ01111936.2 CABZ01111936.2 2 0.943 - - - - - 0.943 - - -
95. THSD7A THSD7A 69 0.943 - - - - - 0.943 - - -
96. trim35-29 ENSDARG00000055730 24 0.943 - - - - - 0.943 - - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
97. CT583625.1 ENSDARG00000093788 10 0.943 - - - - - 0.943 - - -
98. CYP2W1 CYP2W1 5 0.943 - - - - - 0.943 - - -
99. syt5b ENSDARG00000011640 70 0.943 - - - - - 0.943 - - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
100. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 0.943 - - - - - 0.943 - - - zgc:172218 [Source:NCBI gene;Acc:793798]

There are 1188 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA