Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mdh1a

Gene Name Gene ID Reads Annotation
mdh1a mdh1a 11035










Genes with expression patterns similar to mdh1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mdh1a mdh1a 11035 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. acadvl ENSDARG00000016687 5329 2.541 - - 0.927 - 0.904 0.710 - - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
3. BRK1 ENSDARG00000041974 6430 2.398 - 0.710 0.916 - - 0.772 - - - BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
4. ctnna1 ENSDARG00000102441 7984 2.364 - 0.774 0.842 - - 0.748 - - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
5. psmb2 ENSDARG00000031511 4016 2.21 - 0.758 - - - 0.704 - 0.748 - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
6. sipa1l2 ENSDARG00000061640 4545 1.912 - - 0.921 - - - 0.991 - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
7. wu:fb12e11 wu:fb12e11 2332 1.903 - - 0.913 - - - 0.990 - -
8. eif5 ENSDARG00000003681 7986 1.854 - - 0.863 - - - 0.991 - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
9. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 1.827 - - - - - 0.841 0.986 - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
10. gpt2l ENSDARG00000019541 3397 1.8 - - - - - 0.808 0.992 - - glutamic pyruvate transaminase (alanine aminotransferase) 2, like [Source:ZFIN;Acc:ZDB-GENE-050302-11]
11. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.794 - - 0.927 - 0.867 - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
12. tmem50a ENSDARG00000015757 3244 1.791 - - 0.934 - 0.857 - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
13. TUBB8P7_1 TUBB8P7_1 2722 1.789 - - 0.925 - 0.864 - - - -
14. lin54 ENSDARG00000063194 2583 1.781 - - 0.922 - 0.859 - - - - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
15. lima1 lima1 4760 1.781 - - 0.920 - 0.861 - - - -
16. rpl7l1 ENSDARG00000042864 3256 1.78 - - 0.915 - 0.865 - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
17. psmd14 ENSDARG00000063100 15711 1.775 - - - - - 0.784 0.991 - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
18. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.774 - - - - 0.784 - 0.990 - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
19. eng1b eng1b 2544 1.773 - - 0.913 - 0.860 - - - -
20. rps11 ENSDARG00000053058 16233 1.772 - - - - - 0.785 0.987 - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
21. axin2 ENSDARG00000100149 4223 1.767 - - 0.949 - 0.818 - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
22. hexim1 ENSDARG00000036482 4317 1.766 - - 0.923 - 0.843 - - - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
23. nr2f1a ENSDARG00000052695 5037 1.765 - - 0.878 - 0.887 - - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
24. oaz1b ENSDARG00000104782 37623 1.748 - - 0.905 - - - 0.843 - - ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
25. ube4b ENSDARG00000037017 8012 1.743 - - 0.937 - 0.806 - - - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
26. DLC1 ENSDARG00000079317 2149 1.74 - - 0.910 - 0.830 - - - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
27. lypla2 ENSDARG00000053656 8971 1.727 - 0.816 0.911 - - - - - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
28. eif4h ENSDARG00000042252 6742 1.713 - - 0.889 - - 0.824 - - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
29. hadhab ENSDARG00000060594 3664 1.712 - - 0.917 - - 0.795 - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
30. rbfox2 ENSDARG00000052182 6621 1.7 - - 0.709 - - - 0.991 - - RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
31. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.688 - - - - 0.915 0.773 - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
32. bcat2 ENSDARG00000054849 4317 1.673 - - 0.918 - - 0.755 - - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
33. gigfy2 3194 1.673 - - 0.928 - - - - 0.745 - GRB10 interacting GYF protein 2, transcript variant X1
34. TUBGCP6 1991 1.673 - - 0.917 - - - - 0.756 - tubulin, gamma complex associated protein 6
35. COA6 ENSDARG00000092677 1877 1.672 - - 0.919 - - 0.753 - - - cytochrome c oxidase assembly factor 6 [Source:ZFIN;Acc:ZDB-GENE-070705-152]
36. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 1.668 - - 0.934 - - - - 0.734 - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
37. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.668 - 0.814 0.854 - - - - - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
38. shmt1 ENSDARG00000052816 5463 1.668 - - - - 0.835 - - 0.833 - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
39. rnf10 ENSDARG00000079687 6768 1.655 - - 0.922 - - - - 0.733 - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
40. eif3m ENSDARG00000013931 8117 1.654 - - 0.785 - 0.869 - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
41. srebf2 ENSDARG00000063438 1982 1.651 - - 0.921 - - - - 0.730 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
42. G3BP2 ENSDARG00000014790 9380 1.649 - - - - 0.922 0.727 - - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
43. txlna ENSDARG00000077037 2614 1.644 - 0.783 - - 0.861 - - - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
44. ssbp4 ENSDARG00000056483 10196 1.643 - 0.776 0.867 - - - - - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
45. gatad2ab ENSDARG00000006192 2461 1.643 - - - - 0.839 - - 0.804 - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
46. nnt ENSDARG00000023536 7357 1.633 - 0.783 - - - 0.850 - - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
47. psmb6 ENSDARG00000002240 8015 1.63 - 0.776 - - 0.854 - - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
48. cox7c ENSDARG00000104537 12169 1.629 - - - - 0.736 0.893 - - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
49. inppl1a ENSDARG00000104222 6256 1.628 - 0.760 0.868 - - - - - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
50. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.626 - - - - 0.777 0.849 - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
51. paxip1 ENSDARG00000005606 1417 1.625 - - - - 0.853 - - 0.772 - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
52. rtf1 ENSDARG00000008947 6596 1.618 - - 0.872 - - 0.746 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
53. casc5 1487 1.608 - - - - 0.862 - - 0.746 - cancer susceptibility candidate 5, transcript variant X3
54. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 1.603 - 0.715 - - 0.888 - - - - survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
55. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.595 - - 0.853 - - - - 0.742 - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
56. ppp1cbl ENSDARG00000102012 2301 1.595 - - - - 0.859 0.736 - - - protein phosphatase 1, catalytic subunit, beta isoform, like [Source:ZFIN;Acc:ZDB-GENE-030131-6529]
57. atp6v1e1b ENSDARG00000030694 5452 1.582 - - - - 0.841 0.741 - - - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
58. CABZ01081490.1 ENSDARG00000111653 11892 1.581 - - - - 0.848 - - 0.733 -
59. sf3b2 ENSDARG00000018049 4675 1.575 - - - - 0.792 - - - 0.783 splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
60. zgc:100918 ENSDARG00000087243 5451 1.574 - 0.736 0.838 - - - - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
61. C2H1orf123 C2H1orf123 2344 1.561 - - - - 0.848 0.713 - - -
62. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 1.559 - 0.710 - - 0.849 - - - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
63. golga7 ENSDARG00000057676 4691 1.554 - 0.790 - - - 0.764 - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
64. lsm12b ENSDARG00000109510 14459 1.548 - - 0.786 - 0.762 - - - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
65. ddi2 ENSDARG00000006477 4190 1.545 - 0.706 - - 0.839 - - - - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
66. ube2v1 ENSDARG00000041875 5739 1.542 - - - - 0.799 - - - 0.743 ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
67. pabpn1 ENSDARG00000045373 4876 1.541 - 0.737 - - - - - 0.804 - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
68. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.537 - - - - 0.820 0.717 - - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
69. mgst3 mgst3 3982 1.524 - 0.750 - - - 0.774 - - -
70. zgc:56095 ENSDARG00000018461 3360 1.523 - 0.738 - - - - - 0.785 - zgc:56095 [Source:ZFIN;Acc:ZDB-GENE-040426-1948]
71. ndufs6 ENSDARG00000056583 7220 1.523 - 0.737 - - - 0.786 - - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
72. elof1 ENSDARG00000099453 6176 1.521 - 0.813 - - - 0.708 - - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
73. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.507 - 0.704 - - - 0.803 - - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
74. srp14 ENSDARG00000115987 3575 1.501 - 0.742 - - - 0.759 - - - signal recognition particle 14 [Source:ZFIN;Acc:ZDB-GENE-050913-131]
75. nmt1a ENSDARG00000052966 5918 1.495 0.764 - - - - 0.731 - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
76. pcnp ENSDARG00000037713 2754 1.495 - 0.745 - - - - - 0.750 - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
77. USMG5 USMG5 10356 1.495 - 0.728 0.767 - - - - - -
78. hadhb ENSDARG00000102055 9700 1.495 - 0.765 - - - - - - 0.730 hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
79. dnaja2 ENSDARG00000104066 11946 1.493 - 0.776 - - - - 0.717 - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
80. zgc:158409 zgc:158409 21963 1.486 0.729 0.757 - - - - - - -
81. sarnp ENSDARG00000059357 4768 1.478 - 0.751 - - - 0.727 - - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
82. tmem258 ENSDARG00000078785 9578 1.476 - 0.740 - - - - - - 0.736 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
83. cbx5 ENSDARG00000061187 24026 1.475 0.723 - - - - 0.752 - - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
84. mpc2 ENSDARG00000024478 16959 1.471 - - 0.743 - 0.728 - - - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
85. eif3g ENSDARG00000016889 10367 1.47 - - - - - 0.763 - - 0.707 eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
86. sdhdb ENSDARG00000030139 9761 1.456 - - - - 0.721 0.735 - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
87. si:ch211-226m16.2 ENSDARG00000036785 2163 1.445 - - 0.733 - - - - 0.712 - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
88. fkbp14 ENSDARG00000040695 7725 1.445 - 0.739 0.706 - - - - - - FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
89. RPS17L RPS17L 51105 1.44 - - - - - 0.739 - - 0.701
90. letm2 ENSDARG00000077515 9561 1.44 - - - - - 0.721 - 0.719 - leucine zipper-EF-hand containing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-090521-4]
91. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.432 - 0.721 - - - - - 0.711 - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
92. AL929007.1 AL929007.1 3649 0.997 - - - - - - 0.997 - -
93. hnrnph1l ENSDARG00000005551 8727 0.996 - - - - - - 0.996 - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
94. ank1 ank1 5209 0.994 - - - - - - 0.994 - -
95. hoxc6a ENSDARG00000070343 2839 0.992 - - - - - - 0.992 - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
96. elavl1 11672 0.992 - - - - - - 0.992 - - ELAV like RNA binding protein 1, transcript variant X3
97. psmb3 ENSDARG00000013938 10744 0.992 - - - - - - 0.992 - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
98. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 0.992 - - - - - - 0.992 - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
99. thrap3b ENSDARG00000098228 4396 0.992 - - - - - - 0.992 - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
100. mcm5 ENSDARG00000019507 6407 0.992 - - - - - - 0.992 - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]

There are 1016 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA