Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for idh1

Gene Name Gene ID Reads Annotation
idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]










Genes with expression patterns similar to idh1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
2. galnt12 ENSDARG00000055490 1653 3.494 - 0.872 - - - - 0.851 0.887 0.884 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
3. s100v1 ENSDARG00000070427 6633 3.469 - - - - - 0.873 0.807 0.876 0.913 S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
4. gale ENSDARG00000002401 5489 2.705 - 0.885 - - - 0.899 0.921 - - UDP-galactose-4-epimerase [Source:ZFIN;Acc:ZDB-GENE-060421-6479]
5. rac2 ENSDARG00000038010 5837 2.687 - - - - - 0.879 0.890 0.918 - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
6. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 2.619 - - - - - - 0.820 0.918 0.881 coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
7. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 2.607 - 0.926 - - - 0.875 0.806 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
8. gpx7 ENSDARG00000091511 3045 2.567 - - - - - 0.861 - 0.931 0.775 glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
9. cav1 ENSDARG00000103747 15519 2.556 - 0.869 - - - - 0.804 0.883 - caveolin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2415]
10. magt1 ENSDARG00000058062 3903 2.546 - - - - - 0.856 0.798 - 0.892 magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
11. actr2a ENSDARG00000052438 5838 2.533 - - - - - 0.881 0.806 - 0.846 ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
12. spcs1 ENSDARG00000059298 5327 2.511 - - - - - 0.934 0.756 - 0.821 signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
13. c1galt1c1 ENSDARG00000036335 1623 2.504 - 0.851 - - - 0.859 0.794 - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
14. anxa3a ENSDARG00000009196, ENSDARG00000112919 2143 2.497 - 0.866 - - - 0.789 0.842 - - annexin A3a [Source:ZFIN;Acc:ZDB-GENE-040912-58]
15. bcar1 ENSDARG00000056525 6563 2.477 - 0.853 - - - 0.899 0.725 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
16. arcn1a ENSDARG00000002792 2847 2.474 - - - - - 0.747 0.875 - 0.852 archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
17. ezrb ENSDARG00000025091 2861 2.461 - - - - - 0.828 0.760 0.873 - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
18. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 2.452 0.701 0.864 - - - - - 0.887 - OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
19. zgc:56530 zgc:56530 6300 2.403 - 0.818 - - - 0.823 0.762 - -
20. s100u ENSDARG00000071014 4754 2.401 - - - - - - 0.704 0.905 0.792 S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
21. MGST1 MGST1 1958 2.268 - 0.830 - - - 0.733 0.705 - -
22. EML4_1 EML4_1 8736 2.266 - - - - - 0.710 - 0.767 0.789
23. sqstm1 ENSDARG00000075014 2392 2.265 - 0.731 - - - 0.759 0.775 - - sequestosome 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2204]
24. ATOX1 ENSDARG00000087693 4016 2.2 0.725 - - - - 0.706 0.769 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
25. arpc5a ENSDARG00000039142 5482 1.826 - - - - - 0.931 0.895 - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
26. PARD3B_1 PARD3B_1 1735 1.802 - 0.883 - - - - 0.919 - -
27. plcd1b ENSDARG00000034080 4074 1.8 - - - - - - 0.871 0.929 - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
28. znf185 ENSDARG00000103917 7195 1.789 - - - - - 0.934 - - 0.855 zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
29. ppl ENSDARG00000101043 9196 1.779 - - - - - 0.936 0.843 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
30. fbxo28 ENSDARG00000027159 9602 1.769 - - - - - - 0.847 0.922 - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
31. serpinf1 ENSDARG00000069048 2083 1.768 - - - - - - - 0.866 0.902 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
32. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.767 - - - - - 0.894 - 0.873 - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
33. pvrl1b 1645 1.766 - - - - - 0.853 - 0.913 - poliovirus receptor-related 1b
34. sri ENSDARG00000058593 13152 1.766 - 0.953 - - - 0.813 - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
35. C2CD2 ENSDARG00000105000 2573 1.765 - - - - - 0.884 - - 0.881 C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
36. actn1 ENSDARG00000007219 2919 1.762 - - - - - 0.883 - - 0.879 actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
37. ajuba ENSDARG00000077842 1152 1.762 - - - - - 0.884 - - 0.878 ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
38. frmd6 ENSDARG00000002332 2698 1.757 - - - - - 0.872 - 0.885 - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
39. atl3 ENSDARG00000004270 2806 1.756 - - - - - 0.838 - 0.918 - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
40. hif1al ENSDARG00000100826 18627 1.753 - - - - - 0.944 - - 0.809 hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
41. sertad2b ENSDARG00000055530 785 1.753 - - - - - 0.911 - - 0.842 SERTA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030616-569]
42. myeov2 3351 1.749 - - - - - 0.909 0.840 - - myeloma overexpressed 2
43. smox ENSDARG00000036967 3816 1.748 - - - - - - 0.825 0.923 - spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
44. prickle1b ENSDARG00000045694 7536 1.735 - 0.848 - - - - - 0.887 - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
45. KRT78 KRT78 10751 1.733 - 0.904 - - - - 0.829 - -
46. hcls1 ENSDARG00000012729 1547 1.73 - 0.844 - - - - - 0.886 - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
47. capn5a ENSDARG00000103317 1923 1.729 - - - - - 0.830 0.899 - - calpain 5a [Source:ZFIN;Acc:ZDB-GENE-061103-214]
48. slc39a7 ENSDARG00000104451 6368 1.729 - - - - - 0.923 - - 0.806 solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
49. padi2 ENSDARG00000044167 6765 1.727 - - - - - - 0.856 - 0.871 peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
50. zgc:101569 ENSDARG00000038876 1525 1.726 - - - - - 0.843 - 0.883 - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
51. mcts1 ENSDARG00000025972 4662 1.726 - 0.869 - - - - - 0.857 - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
52. ZNF337_3 ZNF337_3 561 1.718 - - - - - - - 0.882 0.836
53. tet3 ENSDARG00000062646 6672 1.717 - - - - - 0.884 0.833 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
54. ABI3_1 ABI3_1 511 1.716 - 0.842 - - - 0.874 - - -
55. ildr1a ENSDARG00000103929 2390 1.709 - 0.776 - - - - - 0.933 - immunoglobulin-like domain containing receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1412]
56. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.709 - - - - - - 0.811 0.898 - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
57. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.709 - - - - - - 0.794 0.915 - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
58. SIK1 ENSDARG00000058606 1982 1.707 - - - - - 0.838 - - 0.869 salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
59. adam10a ENSDARG00000053468 9308 1.705 - - - - - - 0.810 - 0.895 ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
60. alox12 ENSDARG00000069463 5787 1.702 - 0.856 - - - 0.846 - - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
61. bambia ENSDARG00000055381 2922 1.699 - - - - - - 0.845 - 0.854 BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
62. C11H6orf120 C11H6orf120 824 1.699 - 0.815 - - - - - 0.884 -
63. ywhabb ENSDARG00000075758 23104 1.699 - - - - - - 0.836 - 0.863 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
64. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.693 - - - - - 0.847 0.846 - - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
65. pef1 ENSDARG00000023989 3013 1.689 - - - - - 0.891 0.798 - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
66. phc1 ENSDARG00000002971 924 1.687 - 0.831 - - - - 0.856 - - polyhomeotic homolog 1 [Source:ZFIN;Acc:ZDB-GENE-081022-39]
67. zgc:113442 ENSDARG00000101906 3092 1.685 - - - - - - 0.789 - 0.896 zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
68. btbd10b ENSDARG00000020252 7251 1.685 - 0.896 - - - - 0.789 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
69. bambib ENSDARG00000099677 4267 1.682 - - - - - - 0.757 0.925 - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
70. fkbp9 ENSDARG00000005023 17518 1.681 - - - - - - - 0.814 0.867 FK506 binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-040801-23]
71. capn2a ENSDARG00000091699 5924 1.68 - 0.905 - - - - 0.775 - - calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
72. tjp3 ENSDARG00000002909 1978 1.68 - 0.839 - - - 0.841 - - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
73. cldnf ENSDARG00000043133 1006 1.678 - 0.867 - - - 0.811 - - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
74. stk10 ENSDARG00000101894 1587 1.678 - - - - - 0.834 0.844 - - serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
75. llgl2 ENSDARG00000023920 2617 1.677 - - - - - - 0.805 - 0.872 lethal giant larvae homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-9877]
76. si:dkey-118j18.2 ENSDARG00000096457 5293 1.676 - - - - - - - 0.822 0.854 si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
77. dgkaa ENSDARG00000060626, ENSDARG00000110977 2315 1.675 - - - - - - 0.814 - 0.861 diacylglycerol kinase, alpha a [Source:ZFIN;Acc:ZDB-GENE-060616-305]
78. fzd1 ENSDARG00000106062 1581 1.674 - 0.862 - - - - 0.812 - - frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
79. rrbp1a ENSDARG00000013763 4723 1.673 - - - - - 0.818 0.855 - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
80. zgc:91985 zgc:91985 1517 1.672 - - - - - - 0.812 - 0.860
81. ik ENSDARG00000004161 3132 1.668 - 0.876 - - - 0.792 - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
82. bcl2l1 ENSDARG00000008434 1956 1.667 - 0.897 - - - - 0.770 - - bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
83. cebpg ENSDARG00000036073 3791 1.667 - - - - - 0.753 - 0.914 - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
84. si:ch211-11k18.4 ENSDARG00000087869 3298 1.666 - - - - - 0.905 - - 0.761 si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
85. s100z ENSDARG00000038729 442 1.665 - - - - - 0.824 - - 0.841 S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
86. stard10 ENSDARG00000097718 1041 1.663 - - - - - 0.908 0.755 - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
87. NFATC3 NFATC3 1712 1.66 - - - - - 0.769 - 0.891 -
88. hm13 ENSDARG00000037846 5019 1.653 - - - - - - - 0.889 0.764 histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
89. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.653 - - - - - - 0.825 - 0.828 ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
90. clcn3 ENSDARG00000003269, ENSDARG00000110064 2961 1.653 0.775 0.878 - - - - - - - chloride channel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1699]
91. si:ch211-264e16.1 ENSDARG00000068947 1358 1.653 - - - - - 0.825 0.828 - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
92. brd1b ENSDARG00000051798 1712 1.652 - - - - - 0.786 - 0.866 - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
93. lgals3l lgals3l 3833 1.65 - - - - - 0.756 - - 0.894
94. emc3 ENSDARG00000020607 3406 1.65 - - - - - 0.813 0.837 - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
95. srp68 ENSDARG00000020820 1719 1.648 - 0.861 - - - - - 0.787 - signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
96. st6gal2 st6gal2 1570 1.646 - - - - - - 0.801 - 0.845
97. f10 ENSDARG00000088581 4968 1.642 - 0.912 - - - - 0.730 - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
98. ostc ENSDARG00000104901 16240 1.642 - - - - - 0.890 - - 0.752 oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
99. klhl11 ENSDARG00000045130 800 1.639 - - - - - 0.767 - - 0.872 kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
100. ovol1 1037 1.638 - - - - - 0.809 0.829 - - ovo-like zinc finger 1, transcript variant X1

There are 1727 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA