Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hoxb4a

Gene Name Gene ID Reads Annotation
hoxb4a ENSDARG00000013533 3857 homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]










Genes with expression patterns similar to hoxb4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxb4a ENSDARG00000013533 3857 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
2. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 1.753 - - - - - - 0.755 - 0.998 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
3. acsl3b ENSDARG00000014674 3748 1.741 - - - 0.997 - 0.744 - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
4. pabpc1a ENSDARG00000017219 95045 1.729 - - - 0.861 - - - - 0.868 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
5. fermt2 ENSDARG00000020242 9351 1.718 - - - 0.996 - - 0.722 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
6. pcmt ENSDARG00000015201 5132 1.717 - - - 0.996 - - 0.721 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
7. myom1a ENSDARG00000061249 10230 1.716 - - - 0.988 - - 0.728 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
8. tnnc1b ENSDARG00000037539 13945 1.522 - 0.723 - - - - 0.799 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
9. STRIP2 ENSDARG00000059003 394 1.522 - 0.793 - - - - 0.729 - - striatin interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120328-1]
10. dnajc5ga ENSDARG00000041896 1478 1.516 - 0.795 - - - - 0.721 - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
11. pygmb ENSDARG00000013317 5454 1.509 - 0.719 - - - - 0.790 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
12. mrrf ENSDARG00000034174, ENSDARG00000115754 791 1.495 - 0.717 - - - - 0.778 - - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
13. limch1a ENSDARG00000074275 2981 1.491 - 0.782 - - - - 0.709 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
14. fam98a ENSDARG00000078391, ENSDARG00000109752, ENSDARG00000110498 997 1.482 - 0.708 - - - - 0.774 - - family with sequence similarity 98, member A [Source:ZFIN;Acc:ZDB-GENE-091202-6]
15. sulf2l sulf2l 4980 1.479 - - 0.755 - 0.724 - - - -
16. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1.478 - - 0.722 - 0.756 - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
17. eif4a2 ENSDARG00000016477 665 1.463 - 0.707 - - - - 0.756 - - eukaryotic translation initiation factor 4A, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2802]
18. klhl21 ENSDARG00000039255 2550 1.457 - 0.703 - - - - 0.754 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
19. FSD2 518 1.454 - 0.735 - - - - 0.719 - - fibronectin type III and SPRY domain containing 2
20. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 1.453 - 0.706 - - - - 0.747 - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
21. stac3 ENSDARG00000098883 1765 1.447 - 0.719 - - - - 0.728 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
22. zgc:153662 zgc:153662 4604 1.444 - 0.709 - - - - 0.735 - -
23. cul2 ENSDARG00000013965 1407 1.442 - - - - - 0.730 0.712 - - cullin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8032]
24. sptb ENSDARG00000030490 7128 1.438 - 0.719 - - - - 0.719 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
25. phox2bb_1 ENSDARG00000091029 212 1.413 - - 0.701 - - - - 0.712 - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
26. chrne ENSDARG00000034307, ENSDARG00000112263 1022 1.41 - 0.709 - - - - 0.701 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
27. b3gnt5b ENSDARG00000004396 1152 1 - - - 1.000 - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-041010-166]
28. FAM35A FAM35A 1091 1 - - - 1.000 - - - - -
29. tchp ENSDARG00000035605 1695 1 - - - 1.000 - - - - - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
30. camkmt ENSDARG00000095224 1204 1 - - - 1.000 - - - - - calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
31. dre-mir-26a-2 ENSDARG00000086601 1267 1 - - - 1.000 - - - - - dre-mir-26a-2 [Source:miRBase;Acc:MI0001925]
32. slc15a4 ENSDARG00000102612 1096 1 - - - 1.000 - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
33. pycr1 pycr1 1258 1 - - - 1.000 - - - - -
34. CR388095.3 CR388095.3 2548 0.999 - - - 0.999 - - - - -
35. idh3g ENSDARG00000023648 4877 0.999 - - - 0.999 - - - - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
36. CU929431.1 CU929431.1 2234 0.999 - - - 0.999 - - - - -
37. EPT1 EPT1 1912 0.999 - - - 0.999 - - - - -
38. ARHGAP23 ARHGAP23 3946 0.999 - - - 0.999 - - - - -
39. pnpla7a ENSDARG00000062986 1793 0.999 - - - 0.999 - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
40. map3k1 ENSDARG00000098405 3043 0.999 - - - 0.999 - - - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
41. dcxr ENSDARG00000079271 3289 0.999 - - - 0.999 - - - - - dicarbonyl/L-xylulose reductase [Source:ZFIN;Acc:ZDB-GENE-030131-7002]
42. rhoae rhoae 4047 0.999 - - - 0.999 - - - - -
43. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 0.999 - - - 0.999 - - - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
44. mpi ENSDARG00000030786 3052 0.999 - - - 0.999 - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
45. camsap2 camsap2 1448 0.999 - - - 0.999 - - - - -
46. herpud2 ENSDARG00000021033 1800 0.999 - - - 0.999 - - - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
47. mertk mertk 1232 0.999 - - - 0.999 - - - - -
48. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.999 - - - 0.999 - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
49. C3H19orf43 C3H19orf43 2961 0.999 - - - 0.999 - - - - -
50. AMBRA1_1 AMBRA1_1 2179 0.999 - - - 0.999 - - - - -
51. serbp1a ENSDARG00000074242 10818 0.999 - - - 0.999 - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
52. CU463857.1 CU463857.1 5541 0.998 - - - 0.998 - - - - -
53. slc25a47a ENSDARG00000059923 1285 0.998 - - - - - - - - 0.998 solute carrier family 25, member 47a [Source:ZFIN;Acc:ZDB-GENE-060616-266]
54. eno2 ENSDARG00000014287 2162 0.998 - - - - - - - - 0.998 enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
55. nacad ENSDARG00000012347 1268 0.998 - - - - - - - - 0.998 NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
56. nkrf ENSDARG00000100536 1873 0.998 - - - 0.998 - - - - - NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]
57. ccnt2b ENSDARG00000036510 3353 0.998 - - - - - - - - 0.998 cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
58. ranbp10 ENSDARG00000062138, ENSDARG00000110661 2067 0.998 - - - - - - - - 0.998 RAN binding protein 10 [Source:ZFIN;Acc:ZDB-GENE-070705-86]
59. alas1 ENSDARG00000021059 4892 0.998 - - - 0.998 - - - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
60. lig3 ENSDARG00000052553 2665 0.998 - - - - - - - - 0.998 ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
61. bhlhe22 ENSDARG00000058039 1673 0.998 - - - - - - - - 0.998 basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
62. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 0.998 - - - - - - - - 0.998 l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
63. SLC9A1 ENSDARG00000067784 1494 0.998 - - - - - - - - 0.998 solute carrier family 9 member A1 [Source:HGNC Symbol;Acc:HGNC:11071]
64. nol11 ENSDARG00000026767 2528 0.998 - - - - - - - - 0.998 nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
65. MYO5C ENSDARG00000104235 1285 0.998 - - - - - - - - 0.998 myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
66. vps51 ENSDARG00000062016, ENSDARG00000110076 1646 0.998 - - - - - - - - 0.998 vacuolar protein sorting 51 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6008]
67. EPHB3 2215 0.998 - - - - - - - - 0.998 EPH receptor B3
68. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 0.998 - - - 0.998 - - - - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
69. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 0.998 - - - - - - - - 0.998 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
70. bin2b ENSDARG00000010255 2649 0.997 - - - - - - - - 0.997 bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
71. CNDP1 CNDP1 6456 0.997 - - - 0.997 - - - - -
72. nhp2 ENSDARG00000069422 9925 0.997 - - - - - - - - 0.997 NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
73. txndc5 ENSDARG00000009342 5387 0.997 - - - 0.997 - - - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
74. ADAMTS3 ENSDARG00000060127 2839 0.997 - - - 0.997 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
75. aurka ENSDARG00000012485 3304 0.997 - - - - - - - - 0.997 aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
76. notch2 ENSDARG00000043130 4430 0.997 - - - - - - - - 0.997 notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
77. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 0.997 - - - - - - - - 0.997 Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
78. vgll4b ENSDARG00000103730 5266 0.997 - - - - - - - - 0.997 vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
79. ppp6c ENSDARG00000002949 2948 0.997 - - - 0.997 - - - - - protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]
80. gap43 ENSDARG00000099744 4114 0.997 - - - 0.997 - - - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
81. obsl1b ENSDARG00000077388 2511 0.997 - - - - - - - - 0.997 obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
82. uqcrc2a ENSDARG00000014794 3949 0.997 - - - - - - - - 0.997 ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
83. slmo2 slmo2 5559 0.997 - - - 0.997 - - - - -
84. abca12 ENSDARG00000074749 2712 0.997 - - - - - - - - 0.997 ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
85. eif3ha ENSDARG00000102452 9238 0.997 - - - - - - - - 0.997 eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
86. add3a ENSDARG00000040874 4938 0.996 - - - - - - - - 0.996 adducin 3 (gamma) a [Source:ZFIN;Acc:ZDB-GENE-030131-2721]
87. hoxb9a ENSDARG00000056023 11856 0.996 - - - - - - - - 0.996 homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
88. blcap ENSDARG00000052073 8646 0.996 - - - 0.996 - - - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
89. EIF1B ENSDARG00000029445 5034 0.996 - - - 0.996 - - - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
90. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.995 - - - - - - - - 0.995 BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
91. rnf150a ENSDARG00000024827 1903 0.995 - - - - - - - - 0.995 ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
92. SERBP1 SERBP1 9276 0.995 - - - 0.995 - - - - -
93. prpf40a ENSDARG00000058467 6565 0.995 - - - 0.995 - - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
94. rerea ENSDARG00000077353 4162 0.994 - - - 0.994 - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
95. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 0.994 - - - 0.994 - - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
96. cul4b ENSDARG00000060510 6053 0.993 - - - 0.993 - - - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
97. zgc:100919 zgc:100919 7746 0.993 - - - 0.993 - - - - -
98. smc1al ENSDARG00000058203 8838 0.992 - - - 0.992 - - - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
99. h2afy2_1 ENSDARG00000087897 9887 0.992 - - - - - - - - 0.992 H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
100. AGO1 ENSDARG00000092644 4521 0.991 - - - 0.991 - - - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]

There are 699 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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