Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hdac4

Gene Name Gene ID Reads Annotation
hdac4 ENSDARG00000098349 1370 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]










Genes with expression patterns similar to hdac4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hdac4 ENSDARG00000098349 1370 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
2. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 2.545 - - 0.961 - 0.721 0.863 - - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
3. arpc5a ENSDARG00000039142 5482 2.513 - 0.704 0.971 - - 0.838 - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
4. als2b ENSDARG00000076924 738 2.44 - - - - - - 0.730 0.796 0.914 amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
5. rwdd ENSDARG00000068256 964 2.319 - - - - 0.705 0.782 - - 0.832 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
6. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 2.272 - - - - - 0.745 0.706 - 0.821 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
7. hgs ENSDARG00000020960 3574 2.251 - 0.773 - - - - 0.726 - 0.752 hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
8. cwc25 ENSDARG00000003382 2134 1.841 - - 0.966 - - - - - 0.875 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
9. zgc:56585 ENSDARG00000026236 704 1.828 - - 0.982 - - - - 0.846 - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
10. prpf4ba ENSDARG00000008784 936 1.82 - - 0.978 - - - - - 0.842 pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
11. ppp1r14c ENSDARG00000077341 1587 1.798 - - 0.988 - - - - - 0.810 protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
12. C2CD2 ENSDARG00000105000 2573 1.791 - - 0.981 - - 0.810 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
13. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 1.791 - - 0.975 - - - - 0.816 - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
14. txnl4a ENSDARG00000036190 2048 1.782 - - 0.953 - - - - - 0.829 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
15. psmd7 ENSDARG00000102417 4732 1.776 - - 0.870 - - 0.906 - - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
16. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 1.772 - - 0.977 - - 0.795 - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
17. CABZ01008011.1 CABZ01008011.1 761 1.76 - - 0.988 - - 0.772 - - -
18. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.753 - - 0.877 - - 0.876 - - - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
19. pitpnbl ENSDARG00000015310, ENSDARG00000110980 3266 1.736 - - 0.946 - - 0.790 - - - phosphatidylinositol transfer protein, beta, like [Source:ZFIN;Acc:ZDB-GENE-040426-2791]
20. arid4a ENSDARG00000043873 4176 1.733 - - 0.953 - - - - - 0.780 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
21. epn2 ENSDARG00000008377 5458 1.73 - - 0.941 - - 0.789 - - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
22. rac2 ENSDARG00000038010 5837 1.725 - - 0.846 - - 0.879 - - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
23. itsn1 ENSDARG00000000086 684 1.725 - - 0.985 - - 0.740 - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
24. mbtps2 ENSDARG00000057577 1285 1.722 - 0.733 0.989 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
25. ubl3b ENSDARG00000021556 1210 1.718 - 0.831 - - - - - - 0.887 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
26. gpr143 ENSDARG00000034572 559 1.716 - - - - - 0.846 - - 0.870 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
27. esyt2a ENSDARG00000030824 1907 1.711 - - 0.961 - - - - 0.750 - extended synaptotagmin-like protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-588]
28. PTDSS2 ENSDARG00000101018 881 1.711 - 0.725 0.986 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
29. lgals3l lgals3l 3833 1.71 - - 0.975 - - 0.735 - - -
30. sarnp ENSDARG00000059357 4768 1.71 - - 0.933 - - - - - 0.777 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
31. TMEM87A TMEM87A 2407 1.71 - 0.736 0.974 - - - - - -
32. BX855614.1 ENSDARG00000094551 1294 1.709 - - 0.966 - - - 0.743 - - si:dkey-262g12.9 [Source:NCBI gene;Acc:555910]
33. si:dkey-92i15.4 ENSDARG00000078387 428 1.703 - - 0.984 - - 0.719 - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
34. sirt2 ENSDARG00000011488 5389 1.702 - - 0.905 - - - 0.797 - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
35. ezrb ENSDARG00000025091 2861 1.696 - - - - - 0.911 - - 0.785 ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
36. tmem248 ENSDARG00000018825 1560 1.696 - 0.876 - - - - - - 0.820 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
37. PARL 2511 1.695 - - - - - - 0.845 - 0.850 presenilin associated rhomboid like
38. dctn3 ENSDARG00000041363 3351 1.692 - - 0.978 - - - 0.714 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
39. ck2b ck2b 781 1.692 - 0.863 - - - 0.829 - - -
40. ccdc28a ENSDARG00000022983, ENSDARG00000091471 1449 1.686 - - - - - 0.868 0.818 - - coiled-coil domain containing 28A [Source:ZFIN;Acc:ZDB-GENE-030131-5007]
41. hsbp1a ENSDARG00000069425 1086 1.684 - 0.789 - - - 0.895 - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
42. triap1 ENSDARG00000014963 646 1.679 - - - - - - - 0.823 0.856 TP53 regulated inhibitor of apoptosis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-161]
43. si:ch211-42i9.4 si:ch211-42i9.4 1448 1.673 - - 0.971 0.702 - - - - -
44. tra2a ENSDARG00000007863 4449 1.673 - - - - - - 0.804 - 0.869 transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
45. CABZ01103862.1 ENSDARG00000109235 3223 1.666 - - 0.960 - - 0.706 - - -
46. zdhhc17 ENSDARG00000070441 1073 1.665 - - - - - - 0.825 - 0.840 zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
47. pfkfb4l pfkfb4l 2539 1.661 - - - - - - 0.826 - 0.835
48. smad3a ENSDARG00000036096, ENSDARG00000117146 2668 1.659 - - 0.950 - - 0.709 - - - SMAD family member 3a [Source:ZFIN;Acc:ZDB-GENE-000509-3]
49. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.657 - - 0.883 - 0.774 - - - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
50. lysmd3 ENSDARG00000024693 754 1.654 - 0.769 - - - - - - 0.885 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
51. CR848745.1 CR848745.1 814 1.65 - 0.848 - - - 0.802 - - -
52. rxrgb ENSDARG00000004697 332 1.649 - - - - - - - 0.786 0.863 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
53. cwc22 ENSDARG00000014008 2385 1.646 - 0.841 - - - - - - 0.805 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
54. CABZ01084569.1 CABZ01084569.1 650 1.644 - - - - - - - 0.801 0.843
55. gid8b ENSDARG00000037589 2121 1.643 - - - - - 0.775 - - 0.868 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
56. tmem180 tmem180 430 1.641 - - - - - 0.841 - 0.800 -
57. ovol1 1037 1.64 - - - - - 0.861 - 0.779 - ovo-like zinc finger 1, transcript variant X1
58. mntb ENSDARG00000073988 1023 1.637 - - - - - - - 0.802 0.835 MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
59. smg6 ENSDARG00000100481 493 1.636 - 0.755 - - - - - - 0.881 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
60. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.636 - - - - - 0.788 - - 0.848 abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
61. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.62 - 0.761 - - - - - - 0.859 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
62. TAF2 ENSDARG00000102307 1401 1.619 - - - - 0.744 - - - 0.875 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
63. sptlc2b ENSDARG00000074287 1853 1.615 - - - - - - 0.809 - 0.806 serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
64. ppm1bb ENSDARG00000011496 10196 1.614 - - 0.911 - - 0.703 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-185]
65. b4galt6 ENSDARG00000010301 2005 1.611 - 0.835 - - - - - - 0.776 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
66. fam177a1 ENSDARG00000079636 2391 1.605 - - - - - 0.812 - 0.793 - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
67. GANAB_1 GANAB_1 685 1.605 - 0.728 - - - - - - 0.877
68. creg2 ENSDARG00000000666 643 1.604 - - - - - - - 0.746 0.858 cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
69. supt16h ENSDARG00000079949 4755 1.604 - - - - - - 0.720 - 0.884 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
70. umps ENSDARG00000012215 4564 1.603 - - - - - - 0.701 - 0.902 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
71. eml3 ENSDARG00000058038 449 1.599 - 0.750 - - - - - - 0.849 echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
72. zgc:173480 171 1.599 - - - - - - - 0.735 0.864 zgc:173480
73. LAMTOR4 ENSDARG00000045542 1181 1.599 - 0.744 - - - 0.855 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7438]
74. pggt1b ENSDARG00000103464 441 1.598 - 0.787 - - 0.811 - - - - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
75. smurf2 ENSDARG00000038067 2057 1.598 - 0.820 - - - 0.778 - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
76. gadd45ab ENSDARG00000104571, ENSDARG00000110532 770 1.598 - 0.752 - - - - - 0.846 - growth arrest and DNA-damage-inducible, alpha, b [Source:ZFIN;Acc:ZDB-GENE-040704-60]
77. brox ENSDARG00000013659 1334 1.596 - - - - - 0.823 0.773 - - BRO1 domain and CAAX motif containing [Source:ZFIN;Acc:ZDB-GENE-041114-137]
78. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.596 - - - - - - - 0.802 0.794 zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
79. arhgef4 ENSDARG00000012914 1464 1.596 - 0.779 - - - - - - 0.817 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
80. CABZ01057907.1 CABZ01057907.1 1140 1.594 - - - - - - - 0.715 0.879
81. ik ENSDARG00000004161 3132 1.587 - - - - - 0.704 - - 0.883 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
82. rasl11a ENSDARG00000046013 1627 1.585 - - - - - 0.784 - 0.801 - RAS-like, family 11, member A [Source:ZFIN;Acc:ZDB-GENE-050417-384]
83. dpf3 ENSDARG00000025309 1376 1.584 - - - - - - 0.788 - 0.796 D4, zinc and double PHD fingers, family 3 [Source:ZFIN;Acc:ZDB-GENE-041014-190]
84. igf2bp2a ENSDARG00000003421 2810 1.58 - 0.722 - - - - - - 0.858 insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
85. smg7 ENSDARG00000060767 2759 1.578 - - 0.766 - - 0.812 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
86. dkk3b ENSDARG00000070683 209 1.575 - 0.713 - - - - - - 0.862 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
87. ngly1 ENSDARG00000003205 733 1.574 - - - - - 0.728 - - 0.846 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
88. ankhd1 ENSDARG00000077860 5510 1.573 - - - - - - 0.718 - 0.855 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
89. TRIP10 TRIP10 1079 1.573 - - - - - 0.720 - - 0.853
90. CABZ01027552.1 CABZ01027552.1 760 1.571 - - - - - 0.805 - 0.766 -
91. dvl3a ENSDARG00000015707 1132 1.566 - 0.771 - - - - - - 0.795 dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
92. pex13 ENSDARG00000071037 738 1.565 - - - - - 0.746 - - 0.819 peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
93. espl1 ENSDARG00000075354 818 1.564 - - - - - - - 0.815 0.749 extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
94. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 1.562 - - 0.819 - - - 0.743 - - cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
95. rps6ka1 ENSDARG00000033437 366 1.561 - - - - 0.766 - - 0.795 - ribosomal protein S6 kinase a, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060929-516]
96. derl1 ENSDARG00000021905 4698 1.56 0.703 - - - - - - - 0.857 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
97. samm50l ENSDARG00000039681 2465 1.559 - - - - - 0.701 - - 0.858 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
98. dhrs13a.2 ENSDARG00000111240 491 1.557 - - - - - 0.718 - - 0.839 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
99. pvrl1b 1645 1.555 - - - - - 0.750 - - 0.805 poliovirus receptor-related 1b
100. arhgap10 ENSDARG00000078326 994 1.554 - - - - - 0.758 0.796 - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]

There are 2092 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA